RNA–Protein interactions for RNA: ENST00000614565.4

CDH4-203, Transcript of cadherin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH4, Length 6,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-203ENST00000614565 KRTAP19-4Q3LI73 84 aa4.34□□□□□ -1.71
CDH4-203ENST00000614565 USH2AO75445 5202 aa4.33□□□□□ -1.72
CDH4-203ENST00000614565 KRTAP19-6Q3LI70 58 aa4.29□□□□□ -1.72
CDH4-203ENST00000614565 LCE1BQ5T7P3 118 aa4.28□□□□□ -1.72
CDH4-203ENST00000614565 LCE1DQ5T752 114 aa4.23□□□□□ -1.73
CDH4-203ENST00000614565 KRTAP19-3Q7Z4W3 81 aa4.23□□□□□ -1.73
CDH4-203ENST00000614565 KRTAP4-7Q9BYR0 210 aa4.21□□□□□ -1.74
CDH4-203ENST00000614565 FSIP2Q5CZC0 6907 aa4.21□□□□□ -1.74
CDH4-203ENST00000614565 KRTAP4-9Q9BYQ8 210 aa4.19□□□□□ -1.74
CDH4-203ENST00000614565 KMT2DO14686 5537 aa4.15□□□□□ -1.74
CDH4-203ENST00000614565 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.14□□□□□ -1.75
CDH4-203ENST00000614565 LCE5AQ5TCM9 118 aa4.1□□□□□ -1.75
CDH4-203ENST00000614565 LCE3DQ9BYE3 92 aa4.08□□□□□ -1.76
CDH4-203ENST00000614565 KRTAP4-3Q9BYR4 195 aa4.08□□□□□ -1.76
CDH4-203ENST00000614565 KRTAP2-3P0C7H8 128 aa4.07□□□□□ -1.76
CDH4-203ENST00000614565 KRTAP2-4Q9BYR9 128 aa4.07□□□□□ -1.76
CDH4-203ENST00000614565 LOC100996750A0A140TA64 210 aa4.05□□□□□ -1.76
CDH4-203ENST00000614565 LCE2AQ5TA79 106 aaPredicted RBP4.04□□□□□ -1.76
CDH4-203ENST00000614565 SYNE2Q8WXH0 6885 aaKnown RBP4.02□□□□□ -1.77
CDH4-203ENST00000614565 LCE3EQ5T5B0 92 aa4.01□□□□□ -1.77
CDH4-203ENST00000614565 MT1EP04732 61 aa4□□□□□ -1.77
CDH4-203ENST00000614565 MT1LQ93083 61 aa3.99□□□□□ -1.77
CDH4-203ENST00000614565 MT1MQ8N339 61 aa3.96□□□□□ -1.77
CDH4-203ENST00000614565 KRTAP6-3Q3LI67 103 aa3.95□□□□□ -1.78
CDH4-203ENST00000614565 MT3P25713 68 aa3.95□□□□□ -1.78
CDH4-203ENST00000614565 KRTAP19-7Q3SYF9 63 aa3.92□□□□□ -1.78
CDH4-203ENST00000614565 SSPOA2VEC9 5147 aa3.9□□□□□ -1.79
CDH4-203ENST00000614565 KRTAP2-2Q9BYT5 123 aa3.89□□□□□ -1.79
CDH4-203ENST00000614565 KRTAP2-1Q9BYU5 128 aa3.89□□□□□ -1.79
CDH4-203ENST00000614565 KRTAP9-6A8MVA2 160 aa3.88□□□□□ -1.79
CDH4-203ENST00000614565 LCE1CQ5T751 118 aa3.87□□□□□ -1.79
CDH4-203ENST00000614565 LCE1EQ5T753 118 aa3.87□□□□□ -1.79
CDH4-203ENST00000614565 LCE1FQ5T754 118 aa3.87□□□□□ -1.79
CDH4-203ENST00000614565 LCE1AQ5T7P2 110 aa3.87□□□□□ -1.79
CDH4-203ENST00000614565 DSTQ03001 7570 aaKnown RBP3.87□□□□□ -1.79
CDH4-203ENST00000614565 SYNE1Q8NF91 8797 aaKnown RBP3.81□□□□□ -1.8
CDH4-203ENST00000614565 FCGBPQ9Y6R7 5405 aaPredicted RBP3.8□□□□□ -1.8
CDH4-203ENST00000614565 MUC12Q9UKN1 5478 aa3.8□□□□□ -1.8
CDH4-203ENST00000614565 PRM1P04553 51 aa3.72□□□□□ -1.81
CDH4-203ENST00000614565 OBSCNQ5VST9 7968 aa3.72□□□□□ -1.81
CDH4-203ENST00000614565 LCE4AQ5TA78 99 aa3.65□□□□□ -1.82
CDH4-203ENST00000614565 KRTAP6-2Q3LI66 62 aa3.6□□□□□ -1.83
CDH4-203ENST00000614565 KRTAP9-9Q9BYP9 154 aa3.58□□□□□ -1.84
CDH4-203ENST00000614565 MT1AP04731 61 aa3.54□□□□□ -1.84
CDH4-203ENST00000614565 MACF1Q9UPN3 7388 aaKnown RBP3.48□□□□□ -1.85
CDH4-203ENST00000614565 KRTAP6-1Q3LI64 71 aa3.45□□□□□ -1.86
CDH4-203ENST00000614565 MDN1Q9NU22 5596 aa3.42□□□□□ -1.86
CDH4-203ENST00000614565 KRTAP9-4Q9BYQ2 154 aa3.38□□□□□ -1.87
CDH4-203ENST00000614565 KRTAP4-6Q9BYQ5 205 aa3.26□□□□□ -1.89
CDH4-203ENST00000614565 NEBP20929 6669 aa3.21□□□□□ -1.89
CDH4-203ENST00000614565 KRTAP4-12Q9BQ66 201 aa3.16□□□□□ -1.9
CDH4-203ENST00000614565 KRTAP4-2Q9BYR5 136 aa3.16□□□□□ -1.9
CDH4-203ENST00000614565 KRTAP5-9P26371 169 aa3.1□□□□□ -1.91
CDH4-203ENST00000614565 KRTAP20-2Q3LI61 65 aa3.09□□□□□ -1.91
CDH4-203ENST00000614565 GPR98Q8WXG9 6306 aa3.06□□□□□ -1.92
CDH4-203ENST00000614565 KRTAP4-4Q9BYR3 166 aa3.02□□□□□ -1.93
CDH4-203ENST00000614565 KRTAP5-5Q701N2 237 aaPredicted RBP3□□□□□ -1.93
CDH4-203ENST00000614565 KRTAP4-11Q9BYQ6 195 aa2.82□□□□□ -1.96
CDH4-203ENST00000614565 AHNAK2Q8IVF2 5795 aa2.78□□□□□ -1.96
CDH4-203ENST00000614565 KRTAP5-4Q6L8H1 288 aa2.76□□□□□ -1.97
CDH4-203ENST00000614565 KRTAP5-3Q6L8H2 238 aa2.68□□□□□ -1.98
CDH4-203ENST00000614565 HMCN1Q96RW7 5635 aa2.65□□□□□ -1.98
CDH4-203ENST00000614565 PHGR1C9JFL3 82 aa2.54□□□□□ -2
CDH4-203ENST00000614565 AHNAKQ09666 5890 aaKnown RBP2.53□□□□□ -2
CDH4-203ENST00000614565 MUC5ACP98088 5654 aa2.49□□□□□ -2.01
CDH4-203ENST00000614565 KRTAP5-8O75690 187 aa2.45□□□□□ -2.02
CDH4-203ENST00000614565 KRTAP5-2Q701N4 177 aa2.45□□□□□ -2.02
CDH4-203ENST00000614565 MUC19Q7Z5P9 8384 aa2.42□□□□□ -2.02
CDH4-203ENST00000614565 KRTAP5-10Q6L8G5 202 aa2.24□□□□□ -2.05
CDH4-203ENST00000614565 KRTAP5-1Q6L8H4 278 aa2.13□□□□□ -2.07
CDH4-203ENST00000614565 MUC5BQ9HC84 5762 aaPredicted RBP2.09□□□□□ -2.08
CDH4-203ENST00000614565 KRTAP21-2Q3LI59 83 aa2.03□□□□□ -2.08
CDH4-203ENST00000614565 KRTAP5-7Q6L8G8 165 aa2.03□□□□□ -2.08
CDH4-203ENST00000614565 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.96□□□□□ -2.1
CDH4-203ENST00000614565 KRTAP5-11Q6L8G4 156 aa1.86□□□□□ -2.11
CDH4-203ENST00000614565 KRTAP21-1Q3LI58 79 aa1.75□□□□□ -2.13
CDH4-203ENST00000614565 MUC16Q8WXI7 14507 aa1.32□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 10.1 ms