RNA–Protein interactions for RNA: ENST00000614293.4

ABCA2-223, Transcript of ATP binding cassette subfamily A member 2, human

TSL 5 BASIC

Gene ABCA2, Length 8,146 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA2-223	ENST00000614293	LCE1C	Q5T751	118 aa		3.6	□□□□□ -1.83
ABCA2-223	ENST00000614293	LCE1E	Q5T753	118 aa		3.6	□□□□□ -1.83
ABCA2-223	ENST00000614293	LCE1F	Q5T754	118 aa		3.6	□□□□□ -1.83
ABCA2-223	ENST00000614293	LCE1A	Q5T7P2	110 aa		3.6	□□□□□ -1.83
ABCA2-223	ENST00000614293	KRTAP2-3	P0C7H8	128 aa		3.6	□□□□□ -1.83
ABCA2-223	ENST00000614293	KRTAP2-4	Q9BYR9	128 aa		3.6	□□□□□ -1.83
ABCA2-223	ENST00000614293	HERC2	O95714	4834 aa		3.58	□□□□□ -1.84
ABCA2-223	ENST00000614293	KIAA1109	Q2LD37	5005 aa		3.56	□□□□□ -1.84
ABCA2-223	ENST00000614293	KRTAP9-7	A8MTY7	169 aa		3.56	□□□□□ -1.84
ABCA2-223	ENST00000614293	LOC100996750	A0A140TA64	210 aa		3.55	□□□□□ -1.84
ABCA2-223	ENST00000614293	HYDIN	Q4G0P3	5121 aa		3.55	□□□□□ -1.84
ABCA2-223	ENST00000614293	LCE2A	Q5TA79	106 aa	Predicted RBP	3.54	□□□□□ -1.84
ABCA2-223	ENST00000614293	LCE4A	Q5TA78	99 aa		3.54	□□□□□ -1.84
ABCA2-223	ENST00000614293	BIRC6	Q9NR09	4857 aa		3.52	□□□□□ -1.85
ABCA2-223	ENST00000614293	KRTAP2-1	Q9BYU5	128 aa		3.52	□□□□□ -1.85
ABCA2-223	ENST00000614293	MT1A	P04731	61 aa		3.47	□□□□□ -1.85
ABCA2-223	ENST00000614293	KRTAP6-3	Q3LI67	103 aa		3.47	□□□□□ -1.85
ABCA2-223	ENST00000614293	KRTAP4-3	Q9BYR4	195 aa		3.41	□□□□□ -1.86
ABCA2-223	ENST00000614293	HERC1	Q15751	4861 aa		3.41	□□□□□ -1.86
ABCA2-223	ENST00000614293	KRTAP2-2	Q9BYT5	123 aa		3.4	□□□□□ -1.86
ABCA2-223	ENST00000614293	KMT2C	Q8NEZ4	4911 aa	Known RBP	3.4	□□□□□ -1.87
ABCA2-223	ENST00000614293	KRTAP4-9	Q9BYQ8	210 aa		3.37	□□□□□ -1.87
ABCA2-223	ENST00000614293	KRTAP9-9	Q9BYP9	154 aa		3.36	□□□□□ -1.87
ABCA2-223	ENST00000614293	KRTAP19-7	Q3SYF9	63 aa		3.36	□□□□□ -1.87
ABCA2-223	ENST00000614293	EPPK1	P58107	5090 aa	Known RBP	3.32	□□□□□ -1.88
ABCA2-223	ENST00000614293	SYNE2	Q8WXH0	6885 aa	Known RBP	3.31	□□□□□ -1.88
ABCA2-223	ENST00000614293	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	3.3	□□□□□ -1.88
ABCA2-223	ENST00000614293	KRTAP6-2	Q3LI66	62 aa		3.27	□□□□□ -1.89
ABCA2-223	ENST00000614293	KRTAP9-4	Q9BYQ2	154 aa		3.25	□□□□□ -1.89
ABCA2-223	ENST00000614293	SYNE1	Q8NF91	8797 aa	Known RBP	3.18	□□□□□ -1.9
ABCA2-223	ENST00000614293	HMCN2	Q8NDA2	5059 aa		3.14	□□□□□ -1.91
ABCA2-223	ENST00000614293	KRTAP6-1	Q3LI64	71 aa		3.09	□□□□□ -1.91
ABCA2-223	ENST00000614293	KRTAP9-6	A8MVA2	160 aa		3.09	□□□□□ -1.92
ABCA2-223	ENST00000614293	RNF213	Q63HN8	5207 aa		3.03	□□□□□ -1.92
ABCA2-223	ENST00000614293	UBR4	Q5T4S7	5183 aa		3.03	□□□□□ -1.92
ABCA2-223	ENST00000614293	FSIP2	Q5CZC0	6907 aa		2.98	□□□□□ -1.93
ABCA2-223	ENST00000614293	ABCA13	Q86UQ4	5058 aa		2.96	□□□□□ -1.94
ABCA2-223	ENST00000614293	FAT4	Q6V0I7	4981 aa		2.96	□□□□□ -1.94
ABCA2-223	ENST00000614293	MUC2	Q02817	5179 aa		2.89	□□□□□ -1.95
ABCA2-223	ENST00000614293	KRTAP5-9	P26371	169 aa		2.87	□□□□□ -1.95
ABCA2-223	ENST00000614293	KRTAP20-2	Q3LI61	65 aa		2.81	□□□□□ -1.96
ABCA2-223	ENST00000614293	KRTAP4-11	Q9BYQ6	195 aa		2.8	□□□□□ -1.96
ABCA2-223	ENST00000614293	NEB	P20929	6669 aa		2.7	□□□□□ -1.98
ABCA2-223	ENST00000614293	OBSCN	Q5VST9	7968 aa		2.7	□□□□□ -1.98
ABCA2-223	ENST00000614293	MACF1	Q9UPN3	7388 aa	Known RBP	2.69	□□□□□ -1.98
ABCA2-223	ENST00000614293	KMT2D	O14686	5537 aa		2.64	□□□□□ -1.99
ABCA2-223	ENST00000614293	KRTAP4-4	Q9BYR3	166 aa		2.6	□□□□□ -1.99
ABCA2-223	ENST00000614293	GPR98	Q8WXG9	6306 aa		2.58	□□□□□ -2
ABCA2-223	ENST00000614293	KRTAP4-6	Q9BYQ5	205 aa		2.57	□□□□□ -2
ABCA2-223	ENST00000614293	DST	Q03001	7570 aa	Known RBP	2.55	□□□□□ -2
ABCA2-223	ENST00000614293	KRTAP5-4	Q6L8H1	288 aa		2.54	□□□□□ -2
ABCA2-223	ENST00000614293	KRTAP4-12	Q9BQ66	201 aa		2.5	□□□□□ -2.01
ABCA2-223	ENST00000614293	KRTAP4-2	Q9BYR5	136 aa		2.5	□□□□□ -2.01
ABCA2-223	ENST00000614293	SSPO	A2VEC9	5147 aa		2.47	□□□□□ -2.01
ABCA2-223	ENST00000614293	MDN1	Q9NU22	5596 aa		2.4	□□□□□ -2.03
ABCA2-223	ENST00000614293	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	2.39	□□□□□ -2.03
ABCA2-223	ENST00000614293	KRTAP5-5	Q701N2	237 aa	Predicted RBP	2.39	□□□□□ -2.03
ABCA2-223	ENST00000614293	USH2A	O75445	5202 aa		2.35	□□□□□ -2.03
ABCA2-223	ENST00000614293	MUC19	Q7Z5P9	8384 aa		2.3	□□□□□ -2.04
ABCA2-223	ENST00000614293	KRTAP5-3	Q6L8H2	238 aa		2.22	□□□□□ -2.05
ABCA2-223	ENST00000614293	PHGR1	C9JFL3	82 aa		2.16	□□□□□ -2.06
ABCA2-223	ENST00000614293	MUC5AC	P98088	5654 aa		2.13	□□□□□ -2.07
ABCA2-223	ENST00000614293	MUC12	Q9UKN1	5478 aa		2.09	□□□□□ -2.07
ABCA2-223	ENST00000614293	AHNAK2	Q8IVF2	5795 aa		2.07	□□□□□ -2.08
ABCA2-223	ENST00000614293	KRTAP5-8	O75690	187 aa		1.95	□□□□□ -2.1
ABCA2-223	ENST00000614293	KRTAP5-10	Q6L8G5	202 aa		1.93	□□□□□ -2.1
ABCA2-223	ENST00000614293	KRTAP5-2	Q701N4	177 aa		1.92	□□□□□ -2.1
ABCA2-223	ENST00000614293	HMCN1	Q96RW7	5635 aa		1.91	□□□□□ -2.1
ABCA2-223	ENST00000614293	MUC5B	Q9HC84	5762 aa	Predicted RBP	1.81	□□□□□ -2.12
ABCA2-223	ENST00000614293	KRTAP5-11	Q6L8G4	156 aa		1.78	□□□□□ -2.12
ABCA2-223	ENST00000614293	AHNAK	Q09666	5890 aa	Known RBP	1.74	□□□□□ -2.13
ABCA2-223	ENST00000614293	KRTAP5-7	Q6L8G8	165 aa		1.68	□□□□□ -2.14
ABCA2-223	ENST00000614293	KRTAP21-1	Q3LI58	79 aa		1.65	□□□□□ -2.15
ABCA2-223	ENST00000614293	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	1.65	□□□□□ -2.15
ABCA2-223	ENST00000614293	KRTAP5-1	Q6L8H4	278 aa		1.63	□□□□□ -2.15
ABCA2-223	ENST00000614293	KRTAP21-2	Q3LI59	83 aa		1.62	□□□□□ -2.15
ABCA2-223	ENST00000614293	MUC16	Q8WXI7	14507 aa		1.27	□□□□□ -2.21

Retrieved 77 of 20,778 RNA–protein pairs in 67.6 ms