RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 ABCA13Q86UQ4 5058 aa5.23□□□□□ -1.57
HMGXB3-206ENST00000613459 KRTAP2-3P0C7H8 128 aa5.21□□□□□ -1.58
HMGXB3-206ENST00000613459 KRTAP2-4Q9BYR9 128 aa5.21□□□□□ -1.58
HMGXB3-206ENST00000613459 KRTAP2-1Q9BYU5 128 aa5.21□□□□□ -1.58
HMGXB3-206ENST00000613459 LOC100996750A0A140TA64 210 aa5.16□□□□□ -1.58
HMGXB3-206ENST00000613459 MT1AP04731 61 aa5.15□□□□□ -1.58
HMGXB3-206ENST00000613459 KRTAP4-3Q9BYR4 195 aa5.12□□□□□ -1.59
HMGXB3-206ENST00000613459 MT4P47944 62 aa5.11□□□□□ -1.59
HMGXB3-206ENST00000613459 KRTAP19-7Q3SYF9 63 aa5.08□□□□□ -1.6
HMGXB3-206ENST00000613459 LCE2AQ5TA79 106 aaPredicted RBP5.04□□□□□ -1.6
HMGXB3-206ENST00000613459 LCE1BQ5T7P3 118 aa5.02□□□□□ -1.61
HMGXB3-206ENST00000613459 KRTAP9-2Q9BYQ4 174 aa5.01□□□□□ -1.61
HMGXB3-206ENST00000613459 LCE1DQ5T752 114 aa5.01□□□□□ -1.61
HMGXB3-206ENST00000613459 FAT4Q6V0I7 4981 aa5.01□□□□□ -1.61
HMGXB3-206ENST00000613459 RNF213Q63HN8 5207 aa5.01□□□□□ -1.61
HMGXB3-206ENST00000613459 SYNE1Q8NF91 8797 aaKnown RBP4.95□□□□□ -1.62
HMGXB3-206ENST00000613459 HMCN2Q8NDA2 5059 aa4.95□□□□□ -1.62
HMGXB3-206ENST00000613459 KRTAP9-6A8MVA2 160 aa4.94□□□□□ -1.62
HMGXB3-206ENST00000613459 UBR4Q5T4S7 5183 aa4.93□□□□□ -1.62
HMGXB3-206ENST00000613459 LCE1AQ5T7P2 110 aa4.89□□□□□ -1.63
HMGXB3-206ENST00000613459 KRTAP4-9Q9BYQ8 210 aa4.86□□□□□ -1.63
HMGXB3-206ENST00000613459 FSIP2Q5CZC0 6907 aa4.8□□□□□ -1.64
HMGXB3-206ENST00000613459 LCE5AQ5TCM9 118 aa4.73□□□□□ -1.65
HMGXB3-206ENST00000613459 KRTAP9-6A0A140TA67 174 aa4.72□□□□□ -1.65
HMGXB3-206ENST00000613459 KRTAP9-4Q9BYQ2 154 aa4.7□□□□□ -1.66
HMGXB3-206ENST00000613459 KRTAP20-1Q3LI63 56 aa4.7□□□□□ -1.66
HMGXB3-206ENST00000613459 MUC2Q02817 5179 aa4.7□□□□□ -1.66
HMGXB3-206ENST00000613459 KRTAP6-2Q3LI66 62 aa4.7□□□□□ -1.66
HMGXB3-206ENST00000613459 KRTAP6-3Q3LI67 103 aa4.69□□□□□ -1.66
HMGXB3-206ENST00000613459 LCE4AQ5TA78 99 aa4.68□□□□□ -1.66
HMGXB3-206ENST00000613459 KRTAP6-1Q3LI64 71 aa4.64□□□□□ -1.67
HMGXB3-206ENST00000613459 KRTAP9-7A8MTY7 169 aa4.6□□□□□ -1.67
HMGXB3-206ENST00000613459 SYNE2Q8WXH0 6885 aaKnown RBP4.55□□□□□ -1.68
HMGXB3-206ENST00000613459 OBSCNQ5VST9 7968 aa4.54□□□□□ -1.68
HMGXB3-206ENST00000613459 KRTAP2-2Q9BYT5 123 aa4.43□□□□□ -1.7
HMGXB3-206ENST00000613459 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.36□□□□□ -1.71
HMGXB3-206ENST00000613459 LCE1CQ5T751 118 aa4.3□□□□□ -1.72
HMGXB3-206ENST00000613459 LCE1EQ5T753 118 aa4.3□□□□□ -1.72
HMGXB3-206ENST00000613459 LCE1FQ5T754 118 aa4.3□□□□□ -1.72
HMGXB3-206ENST00000613459 USH2AO75445 5202 aa4.24□□□□□ -1.73
HMGXB3-206ENST00000613459 FCGBPQ9Y6R7 5405 aaPredicted RBP4.18□□□□□ -1.74
HMGXB3-206ENST00000613459 KMT2DO14686 5537 aa4.12□□□□□ -1.75
HMGXB3-206ENST00000613459 KRTAP9-9Q9BYP9 154 aa4.02□□□□□ -1.77
HMGXB3-206ENST00000613459 DSTQ03001 7570 aaKnown RBP3.99□□□□□ -1.77
HMGXB3-206ENST00000613459 KRTAP5-9P26371 169 aa3.95□□□□□ -1.78
HMGXB3-206ENST00000613459 KRTAP4-11Q9BYQ6 195 aa3.89□□□□□ -1.79
HMGXB3-206ENST00000613459 KRTAP5-5Q701N2 237 aaPredicted RBP3.87□□□□□ -1.79
HMGXB3-206ENST00000613459 SSPOA2VEC9 5147 aa3.87□□□□□ -1.79
HMGXB3-206ENST00000613459 MACF1Q9UPN3 7388 aaKnown RBP3.85□□□□□ -1.79
HMGXB3-206ENST00000613459 NEBP20929 6669 aa3.78□□□□□ -1.8
HMGXB3-206ENST00000613459 KRTAP4-6Q9BYQ5 205 aa3.77□□□□□ -1.81
HMGXB3-206ENST00000613459 KRTAP20-2Q3LI61 65 aa3.77□□□□□ -1.81
HMGXB3-206ENST00000613459 MUC12Q9UKN1 5478 aa3.7□□□□□ -1.82
HMGXB3-206ENST00000613459 KRTAP5-4Q6L8H1 288 aa3.57□□□□□ -1.84
HMGXB3-206ENST00000613459 MUC19Q7Z5P9 8384 aa3.57□□□□□ -1.84
HMGXB3-206ENST00000613459 MDN1Q9NU22 5596 aa3.56□□□□□ -1.84
HMGXB3-206ENST00000613459 KRTAP4-4Q9BYR3 166 aa3.42□□□□□ -1.86
HMGXB3-206ENST00000613459 KRTAP4-12Q9BQ66 201 aa3.32□□□□□ -1.88
HMGXB3-206ENST00000613459 KRTAP4-2Q9BYR5 136 aa3.32□□□□□ -1.88
HMGXB3-206ENST00000613459 GPR98Q8WXG9 6306 aa3.24□□□□□ -1.89
HMGXB3-206ENST00000613459 KRTAP5-3Q6L8H2 238 aa3.11□□□□□ -1.91
HMGXB3-206ENST00000613459 MUC5ACP98088 5654 aa3.04□□□□□ -1.92
HMGXB3-206ENST00000613459 KRTAP5-10Q6L8G5 202 aa2.9□□□□□ -1.95
HMGXB3-206ENST00000613459 HMCN1Q96RW7 5635 aa2.88□□□□□ -1.95
HMGXB3-206ENST00000613459 AHNAK2Q8IVF2 5795 aa2.85□□□□□ -1.95
HMGXB3-206ENST00000613459 KRTAP5-2Q701N4 177 aa2.76□□□□□ -1.97
HMGXB3-206ENST00000613459 KRTAP5-8O75690 187 aa2.74□□□□□ -1.97
HMGXB3-206ENST00000613459 KRTAP5-11Q6L8G4 156 aa2.56□□□□□ -2
HMGXB3-206ENST00000613459 MUC5BQ9HC84 5762 aaPredicted RBP2.54□□□□□ -2
HMGXB3-206ENST00000613459 KRTAP21-1Q3LI58 79 aa2.52□□□□□ -2.01
HMGXB3-206ENST00000613459 PHGR1C9JFL3 82 aa2.51□□□□□ -2.01
HMGXB3-206ENST00000613459 KRTAP5-1Q6L8H4 278 aa2.46□□□□□ -2.02
HMGXB3-206ENST00000613459 KRTAP21-2Q3LI59 83 aa2.38□□□□□ -2.03
HMGXB3-206ENST00000613459 AHNAKQ09666 5890 aaKnown RBP2.37□□□□□ -2.03
HMGXB3-206ENST00000613459 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.27□□□□□ -2.05
HMGXB3-206ENST00000613459 KRTAP5-7Q6L8G8 165 aa1.97□□□□□ -2.09
HMGXB3-206ENST00000613459 MUC16Q8WXI7 14507 aa1.48□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 52.8 ms