RNA–Protein interactions for RNA: ENST00000612303.1

NEAT1-204, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 3 BASIC

Gene NEAT1, Length 572 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-204ENST00000612303 MT1GP13640 62 aa4.69□□□□□ -1.66
NEAT1-204ENST00000612303 KRTAP9-7A8MTY7 169 aa4.67□□□□□ -1.66
NEAT1-204ENST00000612303 MUC12Q9UKN1 5478 aa4.66□□□□□ -1.66
NEAT1-204ENST00000612303 LCE3CQ5T5A8 94 aa4.65□□□□□ -1.67
NEAT1-204ENST00000612303 LCE1AQ5T7P2 110 aa4.64□□□□□ -1.67
NEAT1-204ENST00000612303 LCE5AQ5TCM9 118 aa4.64□□□□□ -1.67
NEAT1-204ENST00000612303 SPRR2EP22531 72 aa4.6□□□□□ -1.67
NEAT1-204ENST00000612303 SPRR2BP35325 72 aa4.6□□□□□ -1.67
NEAT1-204ENST00000612303 SPRR2AP35326 72 aa4.6□□□□□ -1.67
NEAT1-204ENST00000612303 MT1MQ8N339 61 aa4.58□□□□□ -1.68
NEAT1-204ENST00000612303 SPRR5A0A1B0GTR4 108 aa4.57□□□□□ -1.68
NEAT1-204ENST00000612303 KRTAP4-7Q9BYR0 210 aa4.53□□□□□ -1.68
NEAT1-204ENST00000612303 H3BS24 57 aa4.52□□□□□ -1.69
NEAT1-204ENST00000612303 MDN1Q9NU22 5596 aa4.51□□□□□ -1.69
NEAT1-204ENST00000612303 A0A0A0MQY5 61 aa4.46□□□□□ -1.7
NEAT1-204ENST00000612303 SPRR2DP22532 72 aa4.44□□□□□ -1.7
NEAT1-204ENST00000612303 KRTAP4-3Q9BYR4 195 aa4.43□□□□□ -1.7
NEAT1-204ENST00000612303 NEBP20929 6669 aa4.37□□□□□ -1.71
NEAT1-204ENST00000612303 LUZP6Q538Z0 58 aa4.37□□□□□ -1.71
NEAT1-204ENST00000612303 KRTAP9-6A8MVA2 160 aa4.35□□□□□ -1.71
NEAT1-204ENST00000612303 LCE3BQ5TA77 95 aa4.28□□□□□ -1.72
NEAT1-204ENST00000612303 LOC100996750A0A140TA64 210 aa4.25□□□□□ -1.73
NEAT1-204ENST00000612303 KRTAP2-3P0C7H8 128 aa4.23□□□□□ -1.73
NEAT1-204ENST00000612303 KRTAP2-4Q9BYR9 128 aa4.23□□□□□ -1.73
NEAT1-204ENST00000612303 DSTQ03001 7570 aaKnown RBP4.17□□□□□ -1.74
NEAT1-204ENST00000612303 KRTAP5-5Q701N2 237 aaPredicted RBP4.16□□□□□ -1.74
NEAT1-204ENST00000612303 KRTAP20-1Q3LI63 56 aa4.15□□□□□ -1.75
NEAT1-204ENST00000612303 KRTAP2-2Q9BYT5 123 aa4.14□□□□□ -1.75
NEAT1-204ENST00000612303 KRTAP2-1Q9BYU5 128 aa4.14□□□□□ -1.75
NEAT1-204ENST00000612303 NDUFAF8A1L188 74 aa4.13□□□□□ -1.75
NEAT1-204ENST00000612303 MT1AP04731 61 aa4.06□□□□□ -1.76
NEAT1-204ENST00000612303 KRTAP5-4Q6L8H1 288 aa4.04□□□□□ -1.76
NEAT1-204ENST00000612303 LCE4AQ5TA78 99 aa4□□□□□ -1.77
NEAT1-204ENST00000612303 KRTAP6-1Q3LI64 71 aa3.99□□□□□ -1.77
NEAT1-204ENST00000612303 KRTAP12-4P60329 112 aa3.91□□□□□ -1.78
NEAT1-204ENST00000612303 KRTAP9-4Q9BYQ2 154 aa3.88□□□□□ -1.79
NEAT1-204ENST00000612303 SYNE1Q8NF91 8797 aaKnown RBP3.85□□□□□ -1.79
NEAT1-204ENST00000612303 MT4P47944 62 aa3.82□□□□□ -1.8
NEAT1-204ENST00000612303 LCE1DQ5T752 114 aa3.8□□□□□ -1.8
NEAT1-204ENST00000612303 KRTAP4-6Q9BYQ5 205 aa3.8□□□□□ -1.8
NEAT1-204ENST00000612303 KRTAP4-9Q9BYQ8 210 aa3.8□□□□□ -1.8
NEAT1-204ENST00000612303 KRTAP20-2Q3LI61 65 aa3.75□□□□□ -1.81
NEAT1-204ENST00000612303 MT3P25713 68 aa3.7□□□□□ -1.82
NEAT1-204ENST00000612303 HMCN1Q96RW7 5635 aa3.69□□□□□ -1.82
NEAT1-204ENST00000612303 KRTAP6-2Q3LI66 62 aa3.69□□□□□ -1.82
NEAT1-204ENST00000612303 KRTAP5-2Q701N4 177 aa3.65□□□□□ -1.83
NEAT1-204ENST00000612303 KRTAP5-3Q6L8H2 238 aa3.63□□□□□ -1.83
NEAT1-204ENST00000612303 INE1O15225 51 aa3.48□□□□□ -1.85
NEAT1-204ENST00000612303 LCE3DQ9BYE3 92 aa3.48□□□□□ -1.85
NEAT1-204ENST00000612303 LCE3EQ5T5B0 92 aa3.38□□□□□ -1.87
NEAT1-204ENST00000612303 AHNAK2Q8IVF2 5795 aa3.34□□□□□ -1.87
NEAT1-204ENST00000612303 KRTAP4-11Q9BYQ6 195 aa3.28□□□□□ -1.88
NEAT1-204ENST00000612303 OBSCNQ5VST9 7968 aa3.27□□□□□ -1.89
NEAT1-204ENST00000612303 LCE1EQ5T753 118 aa3.27□□□□□ -1.89
NEAT1-204ENST00000612303 KRTAP5-10Q6L8G5 202 aa3.23□□□□□ -1.89
NEAT1-204ENST00000612303 GPR98Q8WXG9 6306 aa3.18□□□□□ -1.9
NEAT1-204ENST00000612303 KRTAP5-8O75690 187 aa3.15□□□□□ -1.91
NEAT1-204ENST00000612303 KRTAP5-1Q6L8H4 278 aa3.14□□□□□ -1.91
NEAT1-204ENST00000612303 KRTAP5-7Q6L8G8 165 aa3.08□□□□□ -1.92
NEAT1-204ENST00000612303 LCE1CQ5T751 118 aa3.02□□□□□ -1.93
NEAT1-204ENST00000612303 LCE1BQ5T7P3 118 aa3.02□□□□□ -1.93
NEAT1-204ENST00000612303 MUC5ACP98088 5654 aa3□□□□□ -1.93
NEAT1-204ENST00000612303 KRTAP4-2Q9BYR5 136 aa3□□□□□ -1.93
NEAT1-204ENST00000612303 KRTAP9-9Q9BYP9 154 aa2.89□□□□□ -1.95
NEAT1-204ENST00000612303 PRM1P04553 51 aa2.86□□□□□ -1.95
NEAT1-204ENST00000612303 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.83□□□□□ -1.96
NEAT1-204ENST00000612303 MUC5BQ9HC84 5762 aaPredicted RBP2.71□□□□□ -1.98
NEAT1-204ENST00000612303 KRTAP5-11Q6L8G4 156 aa2.67□□□□□ -1.98
NEAT1-204ENST00000612303 KRTAP21-2Q3LI59 83 aa2.63□□□□□ -1.99
NEAT1-204ENST00000612303 AHNAKQ09666 5890 aaKnown RBP2.57□□□□□ -2
NEAT1-204ENST00000612303 LCE1FQ5T754 118 aa2.48□□□□□ -2.01
NEAT1-204ENST00000612303 KRTAP4-12Q9BQ66 201 aa2.47□□□□□ -2.01
NEAT1-204ENST00000612303 KRTAP4-4Q9BYR3 166 aa2.29□□□□□ -2.04
NEAT1-204ENST00000612303 PHGR1C9JFL3 82 aa2.28□□□□□ -2.04
NEAT1-204ENST00000612303 MUC19Q7Z5P9 8384 aa1.92□□□□□ -2.1
NEAT1-204ENST00000612303 KRTAP21-1Q3LI58 79 aa1.76□□□□□ -2.13
NEAT1-204ENST00000612303 MUC16Q8WXI7 14507 aa1.52□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 11.1 ms