RNA–Protein interactions for RNA: ENST00000612277.4

HLCS-207, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HLCS, Length 6,112 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-207ENST00000612277 HERC2O95714 4834 aa3.57□□□□□ -1.84
HLCS-207ENST00000612277 MUC2Q02817 5179 aa3.57□□□□□ -1.84
HLCS-207ENST00000612277 PKHD1L1Q86WI1 4243 aa3.57□□□□□ -1.84
HLCS-207ENST00000612277 LCE5AQ5TCM9 118 aa3.54□□□□□ -1.84
HLCS-207ENST00000612277 KRTAP19-2Q3LHN2 52 aa3.52□□□□□ -1.85
HLCS-207ENST00000612277 UBR4Q5T4S7 5183 aa3.52□□□□□ -1.85
HLCS-207ENST00000612277 MT1AP04731 61 aa3.49□□□□□ -1.85
HLCS-207ENST00000612277 KRTAP4-9Q9BYQ8 210 aa3.48□□□□□ -1.85
HLCS-207ENST00000612277 KRTAP2-3P0C7H8 128 aa3.48□□□□□ -1.85
HLCS-207ENST00000612277 KRTAP4-3Q9BYR4 195 aa3.48□□□□□ -1.85
HLCS-207ENST00000612277 KRTAP2-4Q9BYR9 128 aa3.48□□□□□ -1.85
HLCS-207ENST00000612277 KRTAP2-1Q9BYU5 128 aa3.48□□□□□ -1.85
HLCS-207ENST00000612277 LPAP08519 4548 aa3.48□□□□□ -1.85
HLCS-207ENST00000612277 FAT4Q6V0I7 4981 aa3.47□□□□□ -1.85
HLCS-207ENST00000612277 TNXBP22105 4242 aa3.46□□□□□ -1.86
HLCS-207ENST00000612277 KRTAP6-2Q3LI66 62 aa3.45□□□□□ -1.86
HLCS-207ENST00000612277 DSTQ03001 7570 aaKnown RBP3.44□□□□□ -1.86
HLCS-207ENST00000612277 BIRC6Q9NR09 4857 aa3.44□□□□□ -1.86
HLCS-207ENST00000612277 KRTAP19-6Q3LI70 58 aa3.41□□□□□ -1.86
HLCS-207ENST00000612277 FLGP20930 4061 aaPredicted RBP3.39□□□□□ -1.87
HLCS-207ENST00000612277 ABCA13Q86UQ4 5058 aa3.38□□□□□ -1.87
HLCS-207ENST00000612277 MUC17Q685J3 4493 aa3.38□□□□□ -1.87
HLCS-207ENST00000612277 HMCN2Q8NDA2 5059 aa3.35□□□□□ -1.87
HLCS-207ENST00000612277 LCE1CQ5T751 118 aa3.33□□□□□ -1.88
HLCS-207ENST00000612277 LCE1EQ5T753 118 aa3.33□□□□□ -1.88
HLCS-207ENST00000612277 LCE1FQ5T754 118 aa3.33□□□□□ -1.88
HLCS-207ENST00000612277 LCE1AQ5T7P2 110 aa3.33□□□□□ -1.88
HLCS-207ENST00000612277 KRTAP19-7Q3SYF9 63 aa3.3□□□□□ -1.88
HLCS-207ENST00000612277 KRTAP9-7A8MTY7 169 aa3.25□□□□□ -1.89
HLCS-207ENST00000612277 KRTAP9-2Q9BYQ4 174 aa3.22□□□□□ -1.89
HLCS-207ENST00000612277 FCGBPQ9Y6R7 5405 aaPredicted RBP3.21□□□□□ -1.9
HLCS-207ENST00000612277 KRTAP9-4Q9BYQ2 154 aa3.21□□□□□ -1.9
HLCS-207ENST00000612277 USH2AO75445 5202 aa3.2□□□□□ -1.9
HLCS-207ENST00000612277 KRTAP6-1Q3LI64 71 aa3.18□□□□□ -1.9
HLCS-207ENST00000612277 KRTAP2-2Q9BYT5 123 aa3.17□□□□□ -1.9
HLCS-207ENST00000612277 LCE2AQ5TA79 106 aaPredicted RBP3.14□□□□□ -1.91
HLCS-207ENST00000612277 MACF1Q9UPN3 7388 aaKnown RBP3.09□□□□□ -1.91
HLCS-207ENST00000612277 KRTAP9-6A8MVA2 160 aa3.06□□□□□ -1.92
HLCS-207ENST00000612277 KMT2DO14686 5537 aa3.05□□□□□ -1.92
HLCS-207ENST00000612277 KRTAP20-1Q3LI63 56 aa3.05□□□□□ -1.92
HLCS-207ENST00000612277 KRTAP9-6A0A140TA67 174 aa3.01□□□□□ -1.93
HLCS-207ENST00000612277 SYNE2Q8WXH0 6885 aaKnown RBP2.97□□□□□ -1.93
HLCS-207ENST00000612277 KRTAP4-11Q9BYQ6 195 aa2.95□□□□□ -1.94
HLCS-207ENST00000612277 KRTAP6-3Q3LI67 103 aa2.95□□□□□ -1.94
HLCS-207ENST00000612277 MUC19Q7Z5P9 8384 aa2.86□□□□□ -1.95
HLCS-207ENST00000612277 SSPOA2VEC9 5147 aa2.86□□□□□ -1.95
HLCS-207ENST00000612277 MUC12Q9UKN1 5478 aa2.85□□□□□ -1.95
HLCS-207ENST00000612277 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.78□□□□□ -1.96
HLCS-207ENST00000612277 KRTAP9-9Q9BYP9 154 aa2.78□□□□□ -1.96
HLCS-207ENST00000612277 KRTAP20-2Q3LI61 65 aa2.73□□□□□ -1.97
HLCS-207ENST00000612277 MDN1Q9NU22 5596 aa2.67□□□□□ -1.98
HLCS-207ENST00000612277 KRTAP4-4Q9BYR3 166 aa2.56□□□□□ -2
HLCS-207ENST00000612277 KRTAP5-9P26371 169 aa2.48□□□□□ -2.01
HLCS-207ENST00000612277 GPR98Q8WXG9 6306 aa2.46□□□□□ -2.02
HLCS-207ENST00000612277 KRTAP4-6Q9BYQ5 205 aa2.44□□□□□ -2.02
HLCS-207ENST00000612277 KRTAP4-12Q9BQ66 201 aa2.41□□□□□ -2.02
HLCS-207ENST00000612277 KRTAP4-2Q9BYR5 136 aa2.41□□□□□ -2.02
HLCS-207ENST00000612277 NEBP20929 6669 aa2.41□□□□□ -2.02
HLCS-207ENST00000612277 KRTAP5-5Q701N2 237 aaPredicted RBP2.4□□□□□ -2.03
HLCS-207ENST00000612277 KRTAP5-4Q6L8H1 288 aa2.25□□□□□ -2.05
HLCS-207ENST00000612277 MUC5ACP98088 5654 aa2.12□□□□□ -2.07
HLCS-207ENST00000612277 HMCN1Q96RW7 5635 aa2.11□□□□□ -2.07
HLCS-207ENST00000612277 KRTAP5-3Q6L8H2 238 aa1.95□□□□□ -2.1
HLCS-207ENST00000612277 KRTAP5-2Q701N4 177 aa1.85□□□□□ -2.11
HLCS-207ENST00000612277 KRTAP5-10Q6L8G5 202 aa1.83□□□□□ -2.12
HLCS-207ENST00000612277 AHNAKQ09666 5890 aaKnown RBP1.81□□□□□ -2.12
HLCS-207ENST00000612277 AHNAK2Q8IVF2 5795 aa1.81□□□□□ -2.12
HLCS-207ENST00000612277 MUC5BQ9HC84 5762 aaPredicted RBP1.76□□□□□ -2.13
HLCS-207ENST00000612277 PHGR1C9JFL3 82 aa1.76□□□□□ -2.13
HLCS-207ENST00000612277 KRTAP5-8O75690 187 aa1.75□□□□□ -2.13
HLCS-207ENST00000612277 KRTAP21-1Q3LI58 79 aa1.69□□□□□ -2.14
HLCS-207ENST00000612277 KRTAP5-1Q6L8H4 278 aa1.6□□□□□ -2.15
HLCS-207ENST00000612277 KRTAP5-11Q6L8G4 156 aa1.59□□□□□ -2.15
HLCS-207ENST00000612277 KRTAP5-7Q6L8G8 165 aa1.57□□□□□ -2.16
HLCS-207ENST00000612277 KRTAP21-2Q3LI59 83 aa1.52□□□□□ -2.17
HLCS-207ENST00000612277 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.43□□□□□ -2.18
HLCS-207ENST00000612277 MUC16Q8WXI7 14507 aa1.14□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 93.9 ms