RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 CRCT1Q9UGL9 99 aa4.08□□□□□ -1.76
PABPC1-224ENST00000610907 KRTAP12-3P60328 96 aa4.06□□□□□ -1.76
PABPC1-224ENST00000610907 KRTAP10-7P60409 375 aaPredicted RBP4.06□□□□□ -1.76
PABPC1-224ENST00000610907 KRTAP5-3Q6L8H2 238 aa4□□□□□ -1.77
PABPC1-224ENST00000610907 USH2AO75445 5202 aa4□□□□□ -1.77
PABPC1-224ENST00000610907 A0A0A0MQY5 61 aa3.96□□□□□ -1.78
PABPC1-224ENST00000610907 SSPOA2VEC9 5147 aa3.94□□□□□ -1.78
PABPC1-224ENST00000610907 KRTAP19-5Q3LI72 72 aa3.89□□□□□ -1.79
PABPC1-224ENST00000610907 FCGBPQ9Y6R7 5405 aaPredicted RBP3.84□□□□□ -1.8
PABPC1-224ENST00000610907 LCE3CQ5T5A8 94 aa3.82□□□□□ -1.8
PABPC1-224ENST00000610907 KRTAP19-6Q3LI70 58 aa3.76□□□□□ -1.81
PABPC1-224ENST00000610907 KRTAP19-7Q3SYF9 63 aa3.76□□□□□ -1.81
PABPC1-224ENST00000610907 MACF1Q9UPN3 7388 aaKnown RBP3.7□□□□□ -1.82
PABPC1-224ENST00000610907 SYNE2Q8WXH0 6885 aaKnown RBP3.69□□□□□ -1.82
PABPC1-224ENST00000610907 GPR98Q8WXG9 6306 aa3.68□□□□□ -1.82
PABPC1-224ENST00000610907 MT1EP04732 61 aa3.68□□□□□ -1.82
PABPC1-224ENST00000610907 KMT2DO14686 5537 aa3.67□□□□□ -1.82
PABPC1-224ENST00000610907 INE1O15225 51 aa3.65□□□□□ -1.82
PABPC1-224ENST00000610907 MT1LQ93083 61 aa3.65□□□□□ -1.82
PABPC1-224ENST00000610907 NEBP20929 6669 aa3.63□□□□□ -1.83
PABPC1-224ENST00000610907 KRTAP9-6A8MVA2 160 aa3.59□□□□□ -1.83
PABPC1-224ENST00000610907 KRTAP20-1Q3LI63 56 aa3.55□□□□□ -1.84
PABPC1-224ENST00000610907 KRTAP6-3Q3LI67 103 aa3.53□□□□□ -1.84
PABPC1-224ENST00000610907 KRTAP2-3P0C7H8 128 aa3.51□□□□□ -1.85
PABPC1-224ENST00000610907 KRTAP2-4Q9BYR9 128 aa3.51□□□□□ -1.85
PABPC1-224ENST00000610907 KRTAP2-1Q9BYU5 128 aa3.51□□□□□ -1.85
PABPC1-224ENST00000610907 MT1GP13640 62 aa3.49□□□□□ -1.85
PABPC1-224ENST00000610907 KRTAP19-3Q7Z4W3 81 aa3.47□□□□□ -1.85
PABPC1-224ENST00000610907 MUC12Q9UKN1 5478 aa3.46□□□□□ -1.86
PABPC1-224ENST00000610907 MT1MQ8N339 61 aa3.44□□□□□ -1.86
PABPC1-224ENST00000610907 KRTAP5-9P26371 169 aa3.39□□□□□ -1.87
PABPC1-224ENST00000610907 MDN1Q9NU22 5596 aa3.39□□□□□ -1.87
PABPC1-224ENST00000610907 KRTAP4-3Q9BYR4 195 aa3.36□□□□□ -1.87
PABPC1-224ENST00000610907 SPRR2FQ96RM1 72 aa3.34□□□□□ -1.87
PABPC1-224ENST00000610907 SPRR2EP22531 72 aa3.25□□□□□ -1.89
PABPC1-224ENST00000610907 SPRR2BP35325 72 aa3.25□□□□□ -1.89
PABPC1-224ENST00000610907 SPRR2AP35326 72 aa3.25□□□□□ -1.89
PABPC1-224ENST00000610907 LCE1AQ5T7P2 110 aa3.21□□□□□ -1.89
PABPC1-224ENST00000610907 SPRR2DP22532 72 aa3.13□□□□□ -1.91
PABPC1-224ENST00000610907 MT1AP04731 61 aa3.11□□□□□ -1.91
PABPC1-224ENST00000610907 KRTAP5-5Q701N2 237 aaPredicted RBP3.08□□□□□ -1.92
PABPC1-224ENST00000610907 KRTAP2-2Q9BYT5 123 aa3.08□□□□□ -1.92
PABPC1-224ENST00000610907 DSTQ03001 7570 aaKnown RBP3.07□□□□□ -1.92
PABPC1-224ENST00000610907 KRTAP6-1Q3LI64 71 aa3.06□□□□□ -1.92
PABPC1-224ENST00000610907 AHNAK2Q8IVF2 5795 aa3.06□□□□□ -1.92
PABPC1-224ENST00000610907 KRTAP12-4P60329 112 aa3.04□□□□□ -1.92
PABPC1-224ENST00000610907 LCE3DQ9BYE3 92 aa2.93□□□□□ -1.94
PABPC1-224ENST00000610907 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.92□□□□□ -1.94
PABPC1-224ENST00000610907 LCE3EQ5T5B0 92 aa2.89□□□□□ -1.95
PABPC1-224ENST00000610907 KRTAP5-7Q6L8G8 165 aa2.89□□□□□ -1.95
PABPC1-224ENST00000610907 SYNE1Q8NF91 8797 aaKnown RBP2.89□□□□□ -1.95
PABPC1-224ENST00000610907 KRTAP5-11Q6L8G4 156 aa2.86□□□□□ -1.95
PABPC1-224ENST00000610907 AHNAKQ09666 5890 aaKnown RBP2.84□□□□□ -1.95
PABPC1-224ENST00000610907 MT3P25713 68 aa2.82□□□□□ -1.96
PABPC1-224ENST00000610907 KRTAP5-10Q6L8G5 202 aa2.8□□□□□ -1.96
PABPC1-224ENST00000610907 KRTAP5-4Q6L8H1 288 aa2.78□□□□□ -1.96
PABPC1-224ENST00000610907 MUC5BQ9HC84 5762 aaPredicted RBP2.78□□□□□ -1.97
PABPC1-224ENST00000610907 KRTAP6-2Q3LI66 62 aa2.76□□□□□ -1.97
PABPC1-224ENST00000610907 MT4P47944 62 aa2.75□□□□□ -1.97
PABPC1-224ENST00000610907 HMCN1Q96RW7 5635 aa2.74□□□□□ -1.97
PABPC1-224ENST00000610907 LCE1EQ5T753 118 aa2.68□□□□□ -1.98
PABPC1-224ENST00000610907 PRM1P04553 51 aa2.65□□□□□ -1.99
PABPC1-224ENST00000610907 KRTAP20-2Q3LI61 65 aa2.58□□□□□ -2
PABPC1-224ENST00000610907 LCE1FQ5T754 118 aa2.58□□□□□ -2
PABPC1-224ENST00000610907 KRTAP5-2Q701N4 177 aa2.58□□□□□ -2
PABPC1-224ENST00000610907 MUC5ACP98088 5654 aa2.56□□□□□ -2
PABPC1-224ENST00000610907 KRTAP5-1Q6L8H4 278 aa2.53□□□□□ -2.01
PABPC1-224ENST00000610907 OBSCNQ5VST9 7968 aa2.51□□□□□ -2.01
PABPC1-224ENST00000610907 KRTAP4-4Q9BYR3 166 aa2.44□□□□□ -2.02
PABPC1-224ENST00000610907 KRTAP5-8O75690 187 aa2.27□□□□□ -2.05
PABPC1-224ENST00000610907 LCE1CQ5T751 118 aa2.21□□□□□ -2.06
PABPC1-224ENST00000610907 LCE1BQ5T7P3 118 aa2.21□□□□□ -2.06
PABPC1-224ENST00000610907 KRTAP21-2Q3LI59 83 aa2.01□□□□□ -2.09
PABPC1-224ENST00000610907 KRTAP21-1Q3LI58 79 aa1.71□□□□□ -2.14
PABPC1-224ENST00000610907 PHGR1C9JFL3 82 aa1.69□□□□□ -2.14
PABPC1-224ENST00000610907 MUC19Q7Z5P9 8384 aa1.52□□□□□ -2.17
PABPC1-224ENST00000610907 MUC16Q8WXI7 14507 aa1.07□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 7.9 ms