RNA–Protein interactions for RNA: ENST00000610535.4

TNIP1-220, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 5 BASIC

Gene TNIP1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-220ENST00000610535 KRTAP19-4Q3LI73 84 aa5.62□□□□□ -1.51
TNIP1-220ENST00000610535 KRTAP19-6Q3LI70 58 aa5.61□□□□□ -1.51
TNIP1-220ENST00000610535 DSTQ03001 7570 aaKnown RBP5.58□□□□□ -1.52
TNIP1-220ENST00000610535 LOC100996750A0A140TA64 210 aa5.58□□□□□ -1.52
TNIP1-220ENST00000610535 KRTAP4-3Q9BYR4 195 aa5.56□□□□□ -1.52
TNIP1-220ENST00000610535 MACF1Q9UPN3 7388 aaKnown RBP5.49□□□□□ -1.53
TNIP1-220ENST00000610535 MT1GP13640 62 aa5.47□□□□□ -1.53
TNIP1-220ENST00000610535 CRCT1Q9UGL9 99 aa5.46□□□□□ -1.53
TNIP1-220ENST00000610535 SYNE2Q8WXH0 6885 aaKnown RBP5.42□□□□□ -1.54
TNIP1-220ENST00000610535 LCE2DQ5TA82 110 aaPredicted RBP5.41□□□□□ -1.54
TNIP1-220ENST00000610535 KRTAP12-4P60329 112 aa5.34□□□□□ -1.55
TNIP1-220ENST00000610535 MT1MQ8N339 61 aa5.34□□□□□ -1.55
TNIP1-220ENST00000610535 SPRR2FQ96RM1 72 aa5.32□□□□□ -1.56
TNIP1-220ENST00000610535 KRTAP19-3Q7Z4W3 81 aa5.29□□□□□ -1.56
TNIP1-220ENST00000610535 MDN1Q9NU22 5596 aa5.29□□□□□ -1.56
TNIP1-220ENST00000610535 KRTAP9-2Q9BYQ4 174 aa5.21□□□□□ -1.58
TNIP1-220ENST00000610535 LCE3BQ5TA77 95 aa5.15□□□□□ -1.58
TNIP1-220ENST00000610535 KRTAP4-9Q9BYQ8 210 aa5.14□□□□□ -1.59
TNIP1-220ENST00000610535 SYNE1Q8NF91 8797 aaKnown RBP5.11□□□□□ -1.59
TNIP1-220ENST00000610535 LCE5AQ5TCM9 118 aa5.08□□□□□ -1.6
TNIP1-220ENST00000610535 OBSCNQ5VST9 7968 aa4.99□□□□□ -1.61
TNIP1-220ENST00000610535 KRTAP6-1Q3LI64 71 aa4.94□□□□□ -1.62
TNIP1-220ENST00000610535 MT1AP04731 61 aa4.9□□□□□ -1.63
TNIP1-220ENST00000610535 LCE1AQ5T7P2 110 aa4.88□□□□□ -1.63
TNIP1-220ENST00000610535 SPRR2EP22531 72 aa4.87□□□□□ -1.63
TNIP1-220ENST00000610535 SPRR2BP35325 72 aa4.87□□□□□ -1.63
TNIP1-220ENST00000610535 SPRR2AP35326 72 aa4.87□□□□□ -1.63
TNIP1-220ENST00000610535 LCE3DQ9BYE3 92 aa4.85□□□□□ -1.63
TNIP1-220ENST00000610535 KRTAP9-7A8MTY7 169 aa4.84□□□□□ -1.63
TNIP1-220ENST00000610535 LCE3EQ5T5B0 92 aa4.8□□□□□ -1.64
TNIP1-220ENST00000610535 KRTAP5-5Q701N2 237 aaPredicted RBP4.78□□□□□ -1.64
TNIP1-220ENST00000610535 KRTAP5-9P26371 169 aa4.78□□□□□ -1.64
TNIP1-220ENST00000610535 PRM1P04553 51 aa4.77□□□□□ -1.65
TNIP1-220ENST00000610535 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.65□□□□□ -1.66
TNIP1-220ENST00000610535 SPRR2DP22532 72 aa4.64□□□□□ -1.67
TNIP1-220ENST00000610535 KRTAP9-6A0A140TA67 174 aa4.54□□□□□ -1.68
TNIP1-220ENST00000610535 KRTAP6-2Q3LI66 62 aa4.54□□□□□ -1.68
TNIP1-220ENST00000610535 KRTAP9-4Q9BYQ2 154 aa4.51□□□□□ -1.69
TNIP1-220ENST00000610535 KRTAP6-3Q3LI67 103 aa4.49□□□□□ -1.69
TNIP1-220ENST00000610535 NEBP20929 6669 aa4.31□□□□□ -1.72
TNIP1-220ENST00000610535 MT3P25713 68 aa4.3□□□□□ -1.72
TNIP1-220ENST00000610535 MT4P47944 62 aa4.24□□□□□ -1.73
TNIP1-220ENST00000610535 KRTAP4-6Q9BYQ5 205 aa4.19□□□□□ -1.74
TNIP1-220ENST00000610535 KRTAP2-2Q9BYT5 123 aa4.18□□□□□ -1.74
TNIP1-220ENST00000610535 KRTAP5-4Q6L8H1 288 aa4.06□□□□□ -1.76
TNIP1-220ENST00000610535 HMCN1Q96RW7 5635 aa4.06□□□□□ -1.76
TNIP1-220ENST00000610535 KRTAP20-2Q3LI61 65 aa3.93□□□□□ -1.78
TNIP1-220ENST00000610535 LCE1DQ5T752 114 aa3.92□□□□□ -1.78
TNIP1-220ENST00000610535 LCE4AQ5TA78 99 aa3.84□□□□□ -1.8
TNIP1-220ENST00000610535 MUC5ACP98088 5654 aa3.75□□□□□ -1.81
TNIP1-220ENST00000610535 KRTAP5-2Q701N4 177 aa3.75□□□□□ -1.81
TNIP1-220ENST00000610535 KRTAP20-1Q3LI63 56 aa3.74□□□□□ -1.81
TNIP1-220ENST00000610535 KRTAP5-3Q6L8H2 238 aa3.7□□□□□ -1.82
TNIP1-220ENST00000610535 LCE1EQ5T753 118 aa3.64□□□□□ -1.83
TNIP1-220ENST00000610535 KRTAP4-11Q9BYQ6 195 aa3.62□□□□□ -1.83
TNIP1-220ENST00000610535 LCE1BQ5T7P3 118 aa3.6□□□□□ -1.83
TNIP1-220ENST00000610535 KRTAP5-10Q6L8G5 202 aa3.51□□□□□ -1.85
TNIP1-220ENST00000610535 KRTAP5-1Q6L8H4 278 aa3.4□□□□□ -1.87
TNIP1-220ENST00000610535 KRTAP4-2Q9BYR5 136 aa3.29□□□□□ -1.88
TNIP1-220ENST00000610535 AHNAK2Q8IVF2 5795 aa3.24□□□□□ -1.89
TNIP1-220ENST00000610535 LCE1CQ5T751 118 aa3.24□□□□□ -1.89
TNIP1-220ENST00000610535 MUC19Q7Z5P9 8384 aa3.16□□□□□ -1.9
TNIP1-220ENST00000610535 KRTAP5-8O75690 187 aa3.15□□□□□ -1.9
TNIP1-220ENST00000610535 KRTAP21-2Q3LI59 83 aa3.15□□□□□ -1.9
TNIP1-220ENST00000610535 MUC5BQ9HC84 5762 aaPredicted RBP3.13□□□□□ -1.91
TNIP1-220ENST00000610535 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.04□□□□□ -1.92
TNIP1-220ENST00000610535 KRTAP4-4Q9BYR3 166 aa3.02□□□□□ -1.93
TNIP1-220ENST00000610535 KRTAP21-1Q3LI58 79 aa2.96□□□□□ -1.94
TNIP1-220ENST00000610535 KRTAP4-12Q9BQ66 201 aa2.95□□□□□ -1.94
TNIP1-220ENST00000610535 KRTAP5-7Q6L8G8 165 aa2.89□□□□□ -1.95
TNIP1-220ENST00000610535 GPR98Q8WXG9 6306 aa2.87□□□□□ -1.95
TNIP1-220ENST00000610535 KRTAP5-11Q6L8G4 156 aa2.74□□□□□ -1.97
TNIP1-220ENST00000610535 KRTAP9-9Q9BYP9 154 aa2.73□□□□□ -1.97
TNIP1-220ENST00000610535 LCE1FQ5T754 118 aa2.57□□□□□ -2
TNIP1-220ENST00000610535 PHGR1C9JFL3 82 aa2.4□□□□□ -2.02
TNIP1-220ENST00000610535 AHNAKQ09666 5890 aaKnown RBP2.36□□□□□ -2.03
TNIP1-220ENST00000610535 MUC16Q8WXI7 14507 aa1.65□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 59.7 ms