RNA–Protein interactions for RNA: ENST00000610348.1

CDH24-206, Transcript of cadherin 24, humanhuman

TSL 1 (best) BASIC

Gene CDH24, Length 2,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH24-206ENST00000610348 KRTAP9-6A8MVA2 160 aa8.78□□□□□ -1
CDH24-206ENST00000610348 MACF1Q9UPN3 7388 aaKnown RBP8.73□□□□□ -1.01
CDH24-206ENST00000610348 KRTAP4-7Q9BYR0 210 aa8.71□□□□□ -1.02
CDH24-206ENST00000610348 KRTAP2-3P0C7H8 128 aa8.52□□□□□ -1.05
CDH24-206ENST00000610348 KRTAP2-4Q9BYR9 128 aa8.52□□□□□ -1.05
CDH24-206ENST00000610348 KRTAP2-1Q9BYU5 128 aa8.52□□□□□ -1.05
CDH24-206ENST00000610348 SYNE2Q8WXH0 6885 aaKnown RBP8.51□□□□□ -1.05
CDH24-206ENST00000610348 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.51□□□□□ -1.05
CDH24-206ENST00000610348 MT1GP13640 62 aa8.41□□□□□ -1.06
CDH24-206ENST00000610348 KRTAP19-3Q7Z4W3 81 aa8.41□□□□□ -1.06
CDH24-206ENST00000610348 SPRR2FQ96RM1 72 aa8.36□□□□□ -1.07
CDH24-206ENST00000610348 MUC12Q9UKN1 5478 aa8.35□□□□□ -1.07
CDH24-206ENST00000610348 MT1MQ8N339 61 aa8.34□□□□□ -1.07
CDH24-206ENST00000610348 KRTAP5-9P26371 169 aa8.3□□□□□ -1.08
CDH24-206ENST00000610348 KRTAP6-3Q3LI67 103 aa8.22□□□□□ -1.09
CDH24-206ENST00000610348 KRTAP4-3Q9BYR4 195 aa8.22□□□□□ -1.09
CDH24-206ENST00000610348 LCE5AQ5TCM9 118 aa8.14□□□□□ -1.11
CDH24-206ENST00000610348 LOC100996750A0A140TA64 210 aa8.13□□□□□ -1.11
CDH24-206ENST00000610348 MDN1Q9NU22 5596 aa8.1□□□□□ -1.11
CDH24-206ENST00000610348 KRTAP9-7A8MTY7 169 aa8.09□□□□□ -1.11
CDH24-206ENST00000610348 LCE1AQ5T7P2 110 aa8.03□□□□□ -1.12
CDH24-206ENST00000610348 SPRR2EP22531 72 aa7.97□□□□□ -1.13
CDH24-206ENST00000610348 SPRR2BP35325 72 aa7.97□□□□□ -1.13
CDH24-206ENST00000610348 SPRR2AP35326 72 aa7.97□□□□□ -1.13
CDH24-206ENST00000610348 NEBP20929 6669 aa7.72□□□□□ -1.17
CDH24-206ENST00000610348 SPRR2DP22532 72 aa7.67□□□□□ -1.18
CDH24-206ENST00000610348 DSTQ03001 7570 aaKnown RBP7.66□□□□□ -1.18
CDH24-206ENST00000610348 MT1AP04731 61 aa7.52□□□□□ -1.21
CDH24-206ENST00000610348 LCE3BQ5TA77 95 aa7.48□□□□□ -1.21
CDH24-206ENST00000610348 KRTAP6-1Q3LI64 71 aa7.46□□□□□ -1.22
CDH24-206ENST00000610348 KRTAP5-5Q701N2 237 aaPredicted RBP7.42□□□□□ -1.22
CDH24-206ENST00000610348 KRTAP12-4P60329 112 aa7.41□□□□□ -1.22
CDH24-206ENST00000610348 KRTAP4-9Q9BYQ8 210 aa7.18□□□□□ -1.26
CDH24-206ENST00000610348 KRTAP20-1Q3LI63 56 aa7.13□□□□□ -1.27
CDH24-206ENST00000610348 LCE3DQ9BYE3 92 aa7.1□□□□□ -1.27
CDH24-206ENST00000610348 KRTAP9-4Q9BYQ2 154 aa7.08□□□□□ -1.28
CDH24-206ENST00000610348 KRTAP2-2Q9BYT5 123 aa7.05□□□□□ -1.28
CDH24-206ENST00000610348 LCE3EQ5T5B0 92 aa7.01□□□□□ -1.29
CDH24-206ENST00000610348 SYNE1Q8NF91 8797 aaKnown RBP6.99□□□□□ -1.29
CDH24-206ENST00000610348 KRTAP5-4Q6L8H1 288 aa6.91□□□□□ -1.3
CDH24-206ENST00000610348 MT3P25713 68 aa6.79□□□□□ -1.32
CDH24-206ENST00000610348 LCE4AQ5TA78 99 aa6.76□□□□□ -1.33
CDH24-206ENST00000610348 KRTAP6-2Q3LI66 62 aa6.73□□□□□ -1.33
CDH24-206ENST00000610348 MT4P47944 62 aa6.71□□□□□ -1.34
CDH24-206ENST00000610348 KRTAP4-6Q9BYQ5 205 aa6.67□□□□□ -1.34
CDH24-206ENST00000610348 LCE1DQ5T752 114 aa6.61□□□□□ -1.35
CDH24-206ENST00000610348 HMCN1Q96RW7 5635 aa6.5□□□□□ -1.37
CDH24-206ENST00000610348 PRM1P04553 51 aa6.5□□□□□ -1.37
CDH24-206ENST00000610348 KRTAP20-2Q3LI61 65 aa6.47□□□□□ -1.37
CDH24-206ENST00000610348 KRTAP5-3Q6L8H2 238 aa6.26□□□□□ -1.41
CDH24-206ENST00000610348 KRTAP5-2Q701N4 177 aa6.24□□□□□ -1.41
CDH24-206ENST00000610348 OBSCNQ5VST9 7968 aa6.09□□□□□ -1.43
CDH24-206ENST00000610348 AHNAK2Q8IVF2 5795 aa5.86□□□□□ -1.47
CDH24-206ENST00000610348 GPR98Q8WXG9 6306 aa5.82□□□□□ -1.48
CDH24-206ENST00000610348 LCE1EQ5T753 118 aa5.68□□□□□ -1.5
CDH24-206ENST00000610348 KRTAP4-11Q9BYQ6 195 aa5.65□□□□□ -1.51
CDH24-206ENST00000610348 KRTAP5-10Q6L8G5 202 aa5.58□□□□□ -1.52
CDH24-206ENST00000610348 MUC5ACP98088 5654 aa5.49□□□□□ -1.53
CDH24-206ENST00000610348 KRTAP5-8O75690 187 aa5.46□□□□□ -1.54
CDH24-206ENST00000610348 KRTAP5-1Q6L8H4 278 aa5.45□□□□□ -1.54
CDH24-206ENST00000610348 LCE1BQ5T7P3 118 aa5.36□□□□□ -1.55
CDH24-206ENST00000610348 LCE1CQ5T751 118 aa5.31□□□□□ -1.56
CDH24-206ENST00000610348 KRTAP4-2Q9BYR5 136 aa5.25□□□□□ -1.57
CDH24-206ENST00000610348 KRTAP5-7Q6L8G8 165 aa5.21□□□□□ -1.58
CDH24-206ENST00000610348 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.04□□□□□ -1.6
CDH24-206ENST00000610348 KRTAP9-9Q9BYP9 154 aa4.9□□□□□ -1.62
CDH24-206ENST00000610348 KRTAP21-2Q3LI59 83 aa4.85□□□□□ -1.63
CDH24-206ENST00000610348 MUC5BQ9HC84 5762 aaPredicted RBP4.7□□□□□ -1.66
CDH24-206ENST00000610348 KRTAP5-11Q6L8G4 156 aa4.6□□□□□ -1.67
CDH24-206ENST00000610348 AHNAKQ09666 5890 aaKnown RBP4.57□□□□□ -1.68
CDH24-206ENST00000610348 KRTAP4-12Q9BQ66 201 aa4.41□□□□□ -1.7
CDH24-206ENST00000610348 KRTAP4-4Q9BYR3 166 aa4.28□□□□□ -1.73
CDH24-206ENST00000610348 KRTAP21-1Q3LI58 79 aa4.12□□□□□ -1.75
CDH24-206ENST00000610348 LCE1FQ5T754 118 aa4.09□□□□□ -1.76
CDH24-206ENST00000610348 PHGR1C9JFL3 82 aa3.94□□□□□ -1.78
CDH24-206ENST00000610348 MUC19Q7Z5P9 8384 aa3.72□□□□□ -1.81
CDH24-206ENST00000610348 MUC16Q8WXI7 14507 aa2.65□□□□□ -1.99
Retrieved 77 of 20,778 RNA–protein pairs in 8.7 ms