RNA–Protein interactions for RNA: ENST00000608853.5

ATXN2-226, Transcript of ataxin 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ATXN2, Length 4,376 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-226ENST00000608853 LCE2BO14633 110 aa4.07□□□□□ -1.76
ATXN2-226ENST00000608853 MT1LQ93083 61 aa4.06□□□□□ -1.76
ATXN2-226ENST00000608853 LCE2DQ5TA82 110 aaPredicted RBP4.03□□□□□ -1.76
ATXN2-226ENST00000608853 FCGBPQ9Y6R7 5405 aaPredicted RBP4.03□□□□□ -1.76
ATXN2-226ENST00000608853 MT1EP04732 61 aa4.01□□□□□ -1.77
ATXN2-226ENST00000608853 LCE3DQ9BYE3 92 aa4□□□□□ -1.77
ATXN2-226ENST00000608853 LCE3EQ5T5B0 92 aa3.96□□□□□ -1.78
ATXN2-226ENST00000608853 KRTAP19-3Q7Z4W3 81 aa3.95□□□□□ -1.78
ATXN2-226ENST00000608853 SPRR2EP22531 72 aa3.88□□□□□ -1.79
ATXN2-226ENST00000608853 SPRR2BP35325 72 aa3.88□□□□□ -1.79
ATXN2-226ENST00000608853 SPRR2AP35326 72 aa3.88□□□□□ -1.79
ATXN2-226ENST00000608853 KRTAP19-7Q3SYF9 63 aa3.86□□□□□ -1.79
ATXN2-226ENST00000608853 KRTAP2-3P0C7H8 128 aa3.84□□□□□ -1.8
ATXN2-226ENST00000608853 KRTAP2-4Q9BYR9 128 aa3.84□□□□□ -1.8
ATXN2-226ENST00000608853 KRTAP2-1Q9BYU5 128 aa3.84□□□□□ -1.8
ATXN2-226ENST00000608853 LOC100996750A0A140TA64 210 aa3.84□□□□□ -1.8
ATXN2-226ENST00000608853 MT1MQ8N339 61 aa3.83□□□□□ -1.8
ATXN2-226ENST00000608853 KRTAP4-3Q9BYR4 195 aa3.83□□□□□ -1.8
ATXN2-226ENST00000608853 SYNE2Q8WXH0 6885 aaKnown RBP3.82□□□□□ -1.8
ATXN2-226ENST00000608853 KRTAP9-6A8MVA2 160 aa3.75□□□□□ -1.81
ATXN2-226ENST00000608853 PRM1P04553 51 aa3.74□□□□□ -1.81
ATXN2-226ENST00000608853 SPRR2DP22532 72 aa3.74□□□□□ -1.81
ATXN2-226ENST00000608853 MUC12Q9UKN1 5478 aa3.73□□□□□ -1.81
ATXN2-226ENST00000608853 KRTAP19-6Q3LI70 58 aa3.71□□□□□ -1.82
ATXN2-226ENST00000608853 KRTAP9-7A8MTY7 169 aa3.68□□□□□ -1.82
ATXN2-226ENST00000608853 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.68□□□□□ -1.82
ATXN2-226ENST00000608853 KRTAP4-9Q9BYQ8 210 aa3.62□□□□□ -1.83
ATXN2-226ENST00000608853 MT3P25713 68 aa3.6□□□□□ -1.83
ATXN2-226ENST00000608853 SSPOA2VEC9 5147 aa3.58□□□□□ -1.84
ATXN2-226ENST00000608853 MT1AP04731 61 aa3.56□□□□□ -1.84
ATXN2-226ENST00000608853 MACF1Q9UPN3 7388 aaKnown RBP3.51□□□□□ -1.85
ATXN2-226ENST00000608853 KRTAP6-1Q3LI64 71 aa3.42□□□□□ -1.86
ATXN2-226ENST00000608853 KRTAP6-3Q3LI67 103 aa3.41□□□□□ -1.86
ATXN2-226ENST00000608853 LCE5AQ5TCM9 118 aa3.37□□□□□ -1.87
ATXN2-226ENST00000608853 KRTAP6-2Q3LI66 62 aa3.35□□□□□ -1.87
ATXN2-226ENST00000608853 MT4P47944 62 aa3.34□□□□□ -1.87
ATXN2-226ENST00000608853 KRTAP20-1Q3LI63 56 aa3.32□□□□□ -1.88
ATXN2-226ENST00000608853 LCE1DQ5T752 114 aa3.31□□□□□ -1.88
ATXN2-226ENST00000608853 NEBP20929 6669 aa3.3□□□□□ -1.88
ATXN2-226ENST00000608853 LCE1BQ5T7P3 118 aa3.3□□□□□ -1.88
ATXN2-226ENST00000608853 KRTAP9-4Q9BYQ2 154 aa3.25□□□□□ -1.89
ATXN2-226ENST00000608853 MDN1Q9NU22 5596 aa3.23□□□□□ -1.89
ATXN2-226ENST00000608853 LCE1AQ5T7P2 110 aa3.22□□□□□ -1.89
ATXN2-226ENST00000608853 KRTAP5-9P26371 169 aa3.16□□□□□ -1.9
ATXN2-226ENST00000608853 KRTAP2-2Q9BYT5 123 aa3.13□□□□□ -1.91
ATXN2-226ENST00000608853 MUC19Q7Z5P9 8384 aa3.06□□□□□ -1.92
ATXN2-226ENST00000608853 LCE4AQ5TA78 99 aa2.95□□□□□ -1.94
ATXN2-226ENST00000608853 GPR98Q8WXG9 6306 aa2.92□□□□□ -1.94
ATXN2-226ENST00000608853 KRTAP5-5Q701N2 237 aaPredicted RBP2.84□□□□□ -1.95
ATXN2-226ENST00000608853 KRTAP4-6Q9BYQ5 205 aa2.77□□□□□ -1.97
ATXN2-226ENST00000608853 KRTAP4-11Q9BYQ6 195 aa2.77□□□□□ -1.97
ATXN2-226ENST00000608853 KRTAP5-10Q6L8G5 202 aa2.63□□□□□ -1.99
ATXN2-226ENST00000608853 KRTAP20-2Q3LI61 65 aa2.63□□□□□ -1.99
ATXN2-226ENST00000608853 LCE1CQ5T751 118 aa2.62□□□□□ -1.99
ATXN2-226ENST00000608853 LCE1EQ5T753 118 aa2.62□□□□□ -1.99
ATXN2-226ENST00000608853 LCE1FQ5T754 118 aa2.62□□□□□ -1.99
ATXN2-226ENST00000608853 MUC5ACP98088 5654 aa2.61□□□□□ -1.99
ATXN2-226ENST00000608853 KRTAP5-7Q6L8G8 165 aa2.61□□□□□ -1.99
ATXN2-226ENST00000608853 AHNAK2Q8IVF2 5795 aa2.59□□□□□ -1.99
ATXN2-226ENST00000608853 HMCN1Q96RW7 5635 aa2.56□□□□□ -2
ATXN2-226ENST00000608853 KRTAP5-4Q6L8H1 288 aa2.5□□□□□ -2.01
ATXN2-226ENST00000608853 KRTAP9-9Q9BYP9 154 aa2.48□□□□□ -2.01
ATXN2-226ENST00000608853 KRTAP4-4Q9BYR3 166 aa2.41□□□□□ -2.02
ATXN2-226ENST00000608853 KRTAP5-3Q6L8H2 238 aa2.41□□□□□ -2.02
ATXN2-226ENST00000608853 AHNAKQ09666 5890 aaKnown RBP2.31□□□□□ -2.04
ATXN2-226ENST00000608853 KRTAP4-12Q9BQ66 201 aa2.3□□□□□ -2.04
ATXN2-226ENST00000608853 KRTAP4-2Q9BYR5 136 aa2.3□□□□□ -2.04
ATXN2-226ENST00000608853 MUC5BQ9HC84 5762 aaPredicted RBP2.29□□□□□ -2.04
ATXN2-226ENST00000608853 KRTAP5-2Q701N4 177 aa2.15□□□□□ -2.07
ATXN2-226ENST00000608853 KRTAP5-8O75690 187 aa2.13□□□□□ -2.07
ATXN2-226ENST00000608853 KRTAP5-1Q6L8H4 278 aa1.94□□□□□ -2.1
ATXN2-226ENST00000608853 KRTAP21-2Q3LI59 83 aa1.86□□□□□ -2.11
ATXN2-226ENST00000608853 KRTAP5-11Q6L8G4 156 aa1.82□□□□□ -2.12
ATXN2-226ENST00000608853 KRTAP21-1Q3LI58 79 aa1.79□□□□□ -2.12
ATXN2-226ENST00000608853 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.72□□□□□ -2.13
ATXN2-226ENST00000608853 PHGR1C9JFL3 82 aa1.68□□□□□ -2.14
ATXN2-226ENST00000608853 MUC16Q8WXI7 14507 aa1.04□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 60.7 ms