RNA–Protein interactions for RNA: ENST00000608657.5

ITGB5-212, Transcript of integrin subunit beta 5, humanhuman

TSL 3

Gene ITGB5, Length 825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-212ENST00000608657 MUC12Q9UKN1 5478 aa3.35□□□□□ -1.87
ITGB5-212ENST00000608657 NEBP20929 6669 aa3.33□□□□□ -1.88
ITGB5-212ENST00000608657 KRTAP12-3P60328 96 aa3.33□□□□□ -1.88
ITGB5-212ENST00000608657 KRTAP19-7Q3SYF9 63 aa3.3□□□□□ -1.88
ITGB5-212ENST00000608657 SPRR2EP22531 72 aa3.29□□□□□ -1.88
ITGB5-212ENST00000608657 SPRR2BP35325 72 aa3.29□□□□□ -1.88
ITGB5-212ENST00000608657 SPRR2AP35326 72 aa3.29□□□□□ -1.88
ITGB5-212ENST00000608657 KRTAP19-5Q3LI72 72 aa3.29□□□□□ -1.88
ITGB5-212ENST00000608657 KRTAP19-4Q3LI73 84 aa3.29□□□□□ -1.88
ITGB5-212ENST00000608657 MT1EP04732 61 aa3.27□□□□□ -1.89
ITGB5-212ENST00000608657 MDN1Q9NU22 5596 aa3.27□□□□□ -1.89
ITGB5-212ENST00000608657 LCE1AQ5T7P2 110 aa3.25□□□□□ -1.89
ITGB5-212ENST00000608657 KRTAP19-3Q7Z4W3 81 aa3.2□□□□□ -1.9
ITGB5-212ENST00000608657 SPRR2DP22532 72 aa3.18□□□□□ -1.9
ITGB5-212ENST00000608657 MT1LQ93083 61 aa3.16□□□□□ -1.9
ITGB5-212ENST00000608657 KRTAP20-1Q3LI63 56 aa3.15□□□□□ -1.91
ITGB5-212ENST00000608657 LCE5AQ5TCM9 118 aa3.15□□□□□ -1.91
ITGB5-212ENST00000608657 MT1GP13640 62 aa3.14□□□□□ -1.91
ITGB5-212ENST00000608657 LCE3CQ5T5A8 94 aa3.12□□□□□ -1.91
ITGB5-212ENST00000608657 INE1O15225 51 aa3.1□□□□□ -1.91
ITGB5-212ENST00000608657 KRTAP2-3P0C7H8 128 aa3.1□□□□□ -1.91
ITGB5-212ENST00000608657 MT1MQ8N339 61 aa3.1□□□□□ -1.91
ITGB5-212ENST00000608657 KRTAP2-4Q9BYR9 128 aa3.1□□□□□ -1.91
ITGB5-212ENST00000608657 LCE3BQ5TA77 95 aa3.07□□□□□ -1.92
ITGB5-212ENST00000608657 GPR98Q8WXG9 6306 aa3.02□□□□□ -1.93
ITGB5-212ENST00000608657 KRTAP4-7Q9BYR0 210 aa3.02□□□□□ -1.93
ITGB5-212ENST00000608657 KRTAP4-3Q9BYR4 195 aa3.01□□□□□ -1.93
ITGB5-212ENST00000608657 KRTAP2-2Q9BYT5 123 aa3.01□□□□□ -1.93
ITGB5-212ENST00000608657 KRTAP2-1Q9BYU5 128 aa3.01□□□□□ -1.93
ITGB5-212ENST00000608657 DSTQ03001 7570 aaKnown RBP2.93□□□□□ -1.94
ITGB5-212ENST00000608657 LOC100996750A0A140TA64 210 aa2.85□□□□□ -1.95
ITGB5-212ENST00000608657 LCE4AQ5TA78 99 aa2.82□□□□□ -1.96
ITGB5-212ENST00000608657 KRTAP9-6A8MVA2 160 aa2.8□□□□□ -1.96
ITGB5-212ENST00000608657 KRTAP5-5Q701N2 237 aaPredicted RBP2.8□□□□□ -1.96
ITGB5-212ENST00000608657 KRTAP5-4Q6L8H1 288 aa2.79□□□□□ -1.96
ITGB5-212ENST00000608657 KRTAP4-9Q9BYQ8 210 aa2.78□□□□□ -1.96
ITGB5-212ENST00000608657 MT4P47944 62 aa2.76□□□□□ -1.97
ITGB5-212ENST00000608657 LCE1DQ5T752 114 aa2.74□□□□□ -1.97
ITGB5-212ENST00000608657 MT1AP04731 61 aa2.7□□□□□ -1.98
ITGB5-212ENST00000608657 KRTAP12-4P60329 112 aa2.69□□□□□ -1.98
ITGB5-212ENST00000608657 KRTAP4-6Q9BYQ5 205 aa2.69□□□□□ -1.98
ITGB5-212ENST00000608657 HMCN1Q96RW7 5635 aa2.68□□□□□ -1.98
ITGB5-212ENST00000608657 KRTAP6-1Q3LI64 71 aa2.66□□□□□ -1.98
ITGB5-212ENST00000608657 SYNE1Q8NF91 8797 aaKnown RBP2.65□□□□□ -1.99
ITGB5-212ENST00000608657 KRTAP20-2Q3LI61 65 aa2.63□□□□□ -1.99
ITGB5-212ENST00000608657 AHNAK2Q8IVF2 5795 aa2.6□□□□□ -1.99
ITGB5-212ENST00000608657 KRTAP9-4Q9BYQ2 154 aa2.57□□□□□ -2
ITGB5-212ENST00000608657 KRTAP5-3Q6L8H2 238 aa2.53□□□□□ -2
ITGB5-212ENST00000608657 KRTAP6-2Q3LI66 62 aa2.5□□□□□ -2.01
ITGB5-212ENST00000608657 KRTAP5-2Q701N4 177 aa2.49□□□□□ -2.01
ITGB5-212ENST00000608657 KRTAP5-10Q6L8G5 202 aa2.47□□□□□ -2.01
ITGB5-212ENST00000608657 MT3P25713 68 aa2.46□□□□□ -2.02
ITGB5-212ENST00000608657 KRTAP5-7Q6L8G8 165 aa2.42□□□□□ -2.02
ITGB5-212ENST00000608657 LCE3DQ9BYE3 92 aa2.41□□□□□ -2.02
ITGB5-212ENST00000608657 LCE3EQ5T5B0 92 aa2.39□□□□□ -2.03
ITGB5-212ENST00000608657 KRTAP4-11Q9BYQ6 195 aa2.33□□□□□ -2.04
ITGB5-212ENST00000608657 AHNAKQ09666 5890 aaKnown RBP2.3□□□□□ -2.04
ITGB5-212ENST00000608657 KRTAP5-8O75690 187 aa2.25□□□□□ -2.05
ITGB5-212ENST00000608657 OBSCNQ5VST9 7968 aa2.22□□□□□ -2.05
ITGB5-212ENST00000608657 KRTAP4-12Q9BQ66 201 aa2.21□□□□□ -2.06
ITGB5-212ENST00000608657 MUC5ACP98088 5654 aa2.19□□□□□ -2.06
ITGB5-212ENST00000608657 MUC5BQ9HC84 5762 aaPredicted RBP2.18□□□□□ -2.06
ITGB5-212ENST00000608657 LCE1EQ5T753 118 aa2.18□□□□□ -2.06
ITGB5-212ENST00000608657 KRTAP5-1Q6L8H4 278 aa2.18□□□□□ -2.06
ITGB5-212ENST00000608657 PRM1P04553 51 aa2.15□□□□□ -2.07
ITGB5-212ENST00000608657 KRTAP9-9Q9BYP9 154 aa2.1□□□□□ -2.07
ITGB5-212ENST00000608657 LCE1BQ5T7P3 118 aa2.06□□□□□ -2.08
ITGB5-212ENST00000608657 KRTAP4-2Q9BYR5 136 aa2.04□□□□□ -2.08
ITGB5-212ENST00000608657 LCE1CQ5T751 118 aa2.02□□□□□ -2.09
ITGB5-212ENST00000608657 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.87□□□□□ -2.11
ITGB5-212ENST00000608657 KRTAP5-11Q6L8G4 156 aa1.82□□□□□ -2.12
ITGB5-212ENST00000608657 KRTAP21-2Q3LI59 83 aa1.74□□□□□ -2.13
ITGB5-212ENST00000608657 LCE1FQ5T754 118 aa1.71□□□□□ -2.14
ITGB5-212ENST00000608657 KRTAP4-4Q9BYR3 166 aa1.57□□□□□ -2.16
ITGB5-212ENST00000608657 PHGR1C9JFL3 82 aa1.55□□□□□ -2.16
ITGB5-212ENST00000608657 MUC19Q7Z5P9 8384 aa1.37□□□□□ -2.19
ITGB5-212ENST00000608657 KRTAP21-1Q3LI58 79 aa1.37□□□□□ -2.19
ITGB5-212ENST00000608657 MUC16Q8WXI7 14507 aa0.96□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 88.3 ms