RNA–Protein interactions for RNA: ENST00000608568.1

SSX9-202, Transcript of Protein SSX9, humanhuman

TSL 4 BASIC

Gene SSX9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX9-202ENST00000608568 MT2AP02795 61 aa2.31□□□□□ -2.04
SSX9-202ENST00000608568 MT1FP04733 61 aa2.31□□□□□ -2.04
SSX9-202ENST00000608568 TNP1P09430 55 aa2.27□□□□□ -2.05
SSX9-202ENST00000608568 KRTAP5-9P26371 169 aa2.26□□□□□ -2.05
SSX9-202ENST00000608568 KRTAP5-1Q6L8H4 278 aa2.26□□□□□ -2.05
SSX9-202ENST00000608568 LCE1EQ5T753 118 aa2.24□□□□□ -2.05
SSX9-202ENST00000608568 MACF1Q9UPN3 7388 aaKnown RBP2.23□□□□□ -2.05
SSX9-202ENST00000608568 LCE1FQ5T754 118 aa2.22□□□□□ -2.05
SSX9-202ENST00000608568 KRTAP10-10P60014 251 aa2.21□□□□□ -2.06
SSX9-202ENST00000608568 KRTAP5-4Q6L8H1 288 aa2.21□□□□□ -2.06
SSX9-202ENST00000608568 KRTAP4-4Q9BYR3 166 aa2.21□□□□□ -2.06
SSX9-202ENST00000608568 SYNE2Q8WXH0 6885 aaKnown RBP2.2□□□□□ -2.06
SSX9-202ENST00000608568 KRTAP2-2Q9BYT5 123 aa2.2□□□□□ -2.06
SSX9-202ENST00000608568 KRTAP19-6Q3LI70 58 aa2.18□□□□□ -2.06
SSX9-202ENST00000608568 MUC12Q9UKN1 5478 aa2.17□□□□□ -2.06
SSX9-202ENST00000608568 NEBP20929 6669 aa2.11□□□□□ -2.07
SSX9-202ENST00000608568 MT1BP07438 61 aa2.1□□□□□ -2.07
SSX9-202ENST00000608568 KRTAP10-12P60413 245 aa2.1□□□□□ -2.07
SSX9-202ENST00000608568 KRTAP6-3Q3LI67 103 aa2.1□□□□□ -2.07
SSX9-202ENST00000608568 KMT2DO14686 5537 aa2.09□□□□□ -2.07
SSX9-202ENST00000608568 MDN1Q9NU22 5596 aa2.09□□□□□ -2.07
SSX9-202ENST00000608568 KRTAP8-1Q8IUC2 63 aa2.05□□□□□ -2.08
SSX9-202ENST00000608568 KRTAP19-8Q3LI54 63 aa2.04□□□□□ -2.08
SSX9-202ENST00000608568 LCE3CQ5T5A8 94 aa2.04□□□□□ -2.08
SSX9-202ENST00000608568 KRTAP10-5P60370 271 aa2.02□□□□□ -2.09
SSX9-202ENST00000608568 SPRR2GQ9BYE4 73 aa2.02□□□□□ -2.09
SSX9-202ENST00000608568 KRTAP20-1Q3LI63 56 aa1.99□□□□□ -2.09
SSX9-202ENST00000608568 LCE3AQ5TA76 89 aa1.98□□□□□ -2.09
SSX9-202ENST00000608568 MT1XP80297 61 aa1.95□□□□□ -2.1
SSX9-202ENST00000608568 KRTAP12-3P60328 96 aa1.93□□□□□ -2.1
SSX9-202ENST00000608568 KRTAP5-2Q701N4 177 aa1.93□□□□□ -2.1
SSX9-202ENST00000608568 OBSCNQ5VST9 7968 aa1.93□□□□□ -2.1
SSX9-202ENST00000608568 SPRR2FQ96RM1 72 aa1.92□□□□□ -2.1
SSX9-202ENST00000608568 SPRR2EP22531 72 aa1.91□□□□□ -2.1
SSX9-202ENST00000608568 SPRR2BP35325 72 aa1.91□□□□□ -2.1
SSX9-202ENST00000608568 SPRR2AP35326 72 aa1.91□□□□□ -2.1
SSX9-202ENST00000608568 KRTAP2-3P0C7H8 128 aa1.88□□□□□ -2.11
SSX9-202ENST00000608568 KRTAP2-4Q9BYR9 128 aa1.88□□□□□ -2.11
SSX9-202ENST00000608568 KRTAP9-6A8MVA2 160 aa1.87□□□□□ -2.11
SSX9-202ENST00000608568 KRTAP4-3Q9BYR4 195 aa1.87□□□□□ -2.11
SSX9-202ENST00000608568 KRTAP2-1Q9BYU5 128 aa1.87□□□□□ -2.11
SSX9-202ENST00000608568 LCE3EQ5T5B0 92 aa1.86□□□□□ -2.11
SSX9-202ENST00000608568 SPRR2DP22532 72 aa1.84□□□□□ -2.11
SSX9-202ENST00000608568 AHNAK2Q8IVF2 5795 aa1.78□□□□□ -2.13
SSX9-202ENST00000608568 GPR98Q8WXG9 6306 aa1.76□□□□□ -2.13
SSX9-202ENST00000608568 HMCN1Q96RW7 5635 aa1.74□□□□□ -2.13
SSX9-202ENST00000608568 KRTAP19-7Q3SYF9 63 aa1.74□□□□□ -2.13
SSX9-202ENST00000608568 KRTAP19-5Q3LI72 72 aa1.73□□□□□ -2.13
SSX9-202ENST00000608568 DSTQ03001 7570 aaKnown RBP1.73□□□□□ -2.13
SSX9-202ENST00000608568 MT1EP04732 61 aa1.72□□□□□ -2.13
SSX9-202ENST00000608568 KRTAP19-3Q7Z4W3 81 aa1.69□□□□□ -2.14
SSX9-202ENST00000608568 KRTAP12-4P60329 112 aa1.65□□□□□ -2.15
SSX9-202ENST00000608568 MT4P47944 62 aa1.64□□□□□ -2.15
SSX9-202ENST00000608568 MT1MQ8N339 61 aa1.64□□□□□ -2.15
SSX9-202ENST00000608568 LCE3DQ9BYE3 92 aa1.64□□□□□ -2.15
SSX9-202ENST00000608568 MT1LQ93083 61 aa1.63□□□□□ -2.15
SSX9-202ENST00000608568 KRTAP5-8O75690 187 aa1.61□□□□□ -2.15
SSX9-202ENST00000608568 MT1GP13640 62 aa1.6□□□□□ -2.15
SSX9-202ENST00000608568 KRTAP5-10Q6L8G5 202 aa1.59□□□□□ -2.15
SSX9-202ENST00000608568 MT1AP04731 61 aa1.58□□□□□ -2.16
SSX9-202ENST00000608568 KRTAP20-2Q3LI61 65 aa1.52□□□□□ -2.17
SSX9-202ENST00000608568 KRTAP5-7Q6L8G8 165 aa1.52□□□□□ -2.17
SSX9-202ENST00000608568 KRTAP5-5Q701N2 237 aaPredicted RBP1.52□□□□□ -2.17
SSX9-202ENST00000608568 SYNE1Q8NF91 8797 aaKnown RBP1.51□□□□□ -2.17
SSX9-202ENST00000608568 PRM1P04553 51 aa1.47□□□□□ -2.17
SSX9-202ENST00000608568 AHNAKQ09666 5890 aaKnown RBP1.44□□□□□ -2.18
SSX9-202ENST00000608568 LCE1CQ5T751 118 aa1.44□□□□□ -2.18
SSX9-202ENST00000608568 LCE1BQ5T7P3 118 aa1.44□□□□□ -2.18
SSX9-202ENST00000608568 MUC5BQ9HC84 5762 aaPredicted RBP1.42□□□□□ -2.18
SSX9-202ENST00000608568 MUC5ACP98088 5654 aa1.4□□□□□ -2.18
SSX9-202ENST00000608568 KRTAP6-1Q3LI64 71 aa1.4□□□□□ -2.19
SSX9-202ENST00000608568 KRTAP6-2Q3LI66 62 aa1.35□□□□□ -2.19
SSX9-202ENST00000608568 MUC19Q7Z5P9 8384 aa1.21□□□□□ -2.22
SSX9-202ENST00000608568 KRTAP21-1Q3LI58 79 aa1.03□□□□□ -2.24
SSX9-202ENST00000608568 KRTAP21-2Q3LI59 83 aa1.03□□□□□ -2.24
SSX9-202ENST00000608568 PHGR1C9JFL3 82 aa0.91□□□□□ -2.26
SSX9-202ENST00000608568 MUC16Q8WXI7 14507 aa0.63□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 203.2 ms