RNA–Protein interactions for RNA: ENST00000608107.1

ITGB5-211, Transcript of integrin subunit beta 5, humanhuman

TSL 3

Gene ITGB5, Length 548 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-211ENST00000608107 NEBP20929 6669 aa3.69□□□□□ -1.82
ITGB5-211ENST00000608107 KRTAP19-3Q7Z4W3 81 aa3.68□□□□□ -1.82
ITGB5-211ENST00000608107 MT1LQ93083 61 aa3.67□□□□□ -1.82
ITGB5-211ENST00000608107 PP632Q6XCG6 107 aa3.66□□□□□ -1.82
ITGB5-211ENST00000608107 MDN1Q9NU22 5596 aa3.65□□□□□ -1.82
ITGB5-211ENST00000608107 LCE5AQ5TCM9 118 aa3.64□□□□□ -1.83
ITGB5-211ENST00000608107 SPRR2DP22532 72 aa3.63□□□□□ -1.83
ITGB5-211ENST00000608107 MT1GP13640 62 aa3.61□□□□□ -1.83
ITGB5-211ENST00000608107 KRTAP2-3P0C7H8 128 aa3.6□□□□□ -1.83
ITGB5-211ENST00000608107 PRAC1Q96KF2 57 aa3.6□□□□□ -1.83
ITGB5-211ENST00000608107 KRTAP2-4Q9BYR9 128 aa3.6□□□□□ -1.83
ITGB5-211ENST00000608107 KRTAP15-1Q3LI76 137 aa3.58□□□□□ -1.84
ITGB5-211ENST00000608107 MT1MQ8N339 61 aa3.58□□□□□ -1.84
ITGB5-211ENST00000608107 KRTAP4-7Q9BYR0 210 aa3.56□□□□□ -1.84
ITGB5-211ENST00000608107 KRTAP4-3Q9BYR4 195 aa3.55□□□□□ -1.84
ITGB5-211ENST00000608107 LCE3BQ5TA77 95 aa3.5□□□□□ -1.85
ITGB5-211ENST00000608107 KTN1-AS1Q86SY8 53 aa3.49□□□□□ -1.85
ITGB5-211ENST00000608107 DSTQ03001 7570 aaKnown RBP3.47□□□□□ -1.85
ITGB5-211ENST00000608107 KRTAP2-2Q9BYT5 123 aa3.47□□□□□ -1.85
ITGB5-211ENST00000608107 KRTAP2-1Q9BYU5 128 aa3.47□□□□□ -1.85
ITGB5-211ENST00000608107 LCE3CQ5T5A8 94 aa3.46□□□□□ -1.86
ITGB5-211ENST00000608107 KRTAP19-4Q3LI73 84 aa3.43□□□□□ -1.86
ITGB5-211ENST00000608107 LOC100996750A0A140TA64 210 aa3.36□□□□□ -1.87
ITGB5-211ENST00000608107 SVIPQ8NHG7 77 aa3.34□□□□□ -1.87
ITGB5-211ENST00000608107 KRTAP9-6A8MVA2 160 aa3.31□□□□□ -1.88
ITGB5-211ENST00000608107 KRTAP5-5Q701N2 237 aaPredicted RBP3.25□□□□□ -1.89
ITGB5-211ENST00000608107 GPR98Q8WXG9 6306 aa3.23□□□□□ -1.89
ITGB5-211ENST00000608107 KRTAP5-4Q6L8H1 288 aa3.22□□□□□ -1.89
ITGB5-211ENST00000608107 KRTAP4-9Q9BYQ8 210 aa3.22□□□□□ -1.89
ITGB5-211ENST00000608107 LCE4AQ5TA78 99 aa3.2□□□□□ -1.9
ITGB5-211ENST00000608107 SPRR5A0A1B0GTR4 108 aa3.18□□□□□ -1.9
ITGB5-211ENST00000608107 MT4P47944 62 aa3.18□□□□□ -1.9
ITGB5-211ENST00000608107 LCE1DQ5T752 114 aa3.16□□□□□ -1.9
ITGB5-211ENST00000608107 KRTAP4-6Q9BYQ5 205 aa3.13□□□□□ -1.91
ITGB5-211ENST00000608107 MT1AP04731 61 aa3.12□□□□□ -1.91
ITGB5-211ENST00000608107 KRTAP6-1Q3LI64 71 aa3.11□□□□□ -1.91
ITGB5-211ENST00000608107 SYNE1Q8NF91 8797 aaKnown RBP3.07□□□□□ -1.92
ITGB5-211ENST00000608107 KRTAP12-4P60329 112 aa3.05□□□□□ -1.92
ITGB5-211ENST00000608107 KRTAP20-2Q3LI61 65 aa3.03□□□□□ -1.92
ITGB5-211ENST00000608107 HMCN1Q96RW7 5635 aa2.99□□□□□ -1.93
ITGB5-211ENST00000608107 KRTAP9-4Q9BYQ2 154 aa2.98□□□□□ -1.93
ITGB5-211ENST00000608107 KRTAP5-10Q6L8G5 202 aa2.95□□□□□ -1.94
ITGB5-211ENST00000608107 KRTAP5-3Q6L8H2 238 aa2.93□□□□□ -1.94
ITGB5-211ENST00000608107 KRTAP6-2Q3LI66 62 aa2.9□□□□□ -1.95
ITGB5-211ENST00000608107 KRTAP5-7Q6L8G8 165 aa2.9□□□□□ -1.95
ITGB5-211ENST00000608107 LUZP6Q538Z0 58 aa2.89□□□□□ -1.95
ITGB5-211ENST00000608107 KRTAP5-2Q701N4 177 aa2.88□□□□□ -1.95
ITGB5-211ENST00000608107 AHNAK2Q8IVF2 5795 aa2.86□□□□□ -1.95
ITGB5-211ENST00000608107 MT3P25713 68 aa2.81□□□□□ -1.96
ITGB5-211ENST00000608107 OBSCNQ5VST9 7968 aa2.72□□□□□ -1.97
ITGB5-211ENST00000608107 NDUFAF8A1L188 74 aa2.68□□□□□ -1.98
ITGB5-211ENST00000608107 KRTAP4-11Q9BYQ6 195 aa2.68□□□□□ -1.98
ITGB5-211ENST00000608107 KRTAP5-8O75690 187 aa2.59□□□□□ -1.99
ITGB5-211ENST00000608107 KRTAP5-1Q6L8H4 278 aa2.54□□□□□ -2
ITGB5-211ENST00000608107 LCE3DQ9BYE3 92 aa2.54□□□□□ -2
ITGB5-211ENST00000608107 LCE1EQ5T753 118 aa2.49□□□□□ -2.01
ITGB5-211ENST00000608107 AHNAKQ09666 5890 aaKnown RBP2.48□□□□□ -2.01
ITGB5-211ENST00000608107 MUC5ACP98088 5654 aa2.46□□□□□ -2.02
ITGB5-211ENST00000608107 LCE3EQ5T5B0 92 aa2.45□□□□□ -2.02
ITGB5-211ENST00000608107 KRTAP9-9Q9BYP9 154 aa2.41□□□□□ -2.02
ITGB5-211ENST00000608107 LCE1BQ5T7P3 118 aa2.38□□□□□ -2.03
ITGB5-211ENST00000608107 KRTAP4-2Q9BYR5 136 aa2.38□□□□□ -2.03
ITGB5-211ENST00000608107 MUC5BQ9HC84 5762 aaPredicted RBP2.37□□□□□ -2.03
ITGB5-211ENST00000608107 H3BS24 57 aa2.35□□□□□ -2.03
ITGB5-211ENST00000608107 LCE1CQ5T751 118 aa2.32□□□□□ -2.04
ITGB5-211ENST00000608107 A0A0A0MQY5 61 aa2.22□□□□□ -2.05
ITGB5-211ENST00000608107 INE1O15225 51 aa2.15□□□□□ -2.07
ITGB5-211ENST00000608107 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.15□□□□□ -2.07
ITGB5-211ENST00000608107 KRTAP5-11Q6L8G4 156 aa2.08□□□□□ -2.08
ITGB5-211ENST00000608107 KRTAP4-12Q9BQ66 201 aa2.08□□□□□ -2.08
ITGB5-211ENST00000608107 PRM1P04553 51 aa2.04□□□□□ -2.08
ITGB5-211ENST00000608107 KRTAP21-2Q3LI59 83 aa2.03□□□□□ -2.08
ITGB5-211ENST00000608107 LCE1FQ5T754 118 aa1.92□□□□□ -2.1
ITGB5-211ENST00000608107 KRTAP4-4Q9BYR3 166 aa1.87□□□□□ -2.11
ITGB5-211ENST00000608107 PHGR1C9JFL3 82 aa1.8□□□□□ -2.12
ITGB5-211ENST00000608107 MUC19Q7Z5P9 8384 aa1.64□□□□□ -2.15
ITGB5-211ENST00000608107 KRTAP21-1Q3LI58 79 aa1.36□□□□□ -2.19
ITGB5-211ENST00000608107 MUC16Q8WXI7 14507 aa1.18□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 5.9 ms