RNA–Protein interactions for RNA: ENST00000607520.1

SCARNA15-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 4,325 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15-201ENST00000607520 SPRR2EP22531 72 aa2.05□□□□□ -2.08
SCARNA15-201ENST00000607520 SPRR2BP35325 72 aa2.05□□□□□ -2.08
SCARNA15-201ENST00000607520 SPRR2AP35326 72 aa2.05□□□□□ -2.08
SCARNA15-201ENST00000607520 KRTAP12-3P60328 96 aa2.03□□□□□ -2.08
SCARNA15-201ENST00000607520 LCE1AQ5T7P2 110 aa2.03□□□□□ -2.08
SCARNA15-201ENST00000607520 LCE3AQ5TA76 89 aa2.01□□□□□ -2.09
SCARNA15-201ENST00000607520 SPRR2DP22532 72 aa1.99□□□□□ -2.09
SCARNA15-201ENST00000607520 MT1XP80297 61 aa1.99□□□□□ -2.09
SCARNA15-201ENST00000607520 KRTAP10-7P60409 375 aaPredicted RBP1.97□□□□□ -2.09
SCARNA15-201ENST00000607520 MUC2Q02817 5179 aa1.97□□□□□ -2.09
SCARNA15-201ENST00000607520 KRTAP6-3Q3LI67 103 aa1.97□□□□□ -2.09
SCARNA15-201ENST00000607520 KRTAP19-5Q3LI72 72 aa1.93□□□□□ -2.1
SCARNA15-201ENST00000607520 KRTAP20-1Q3LI63 56 aa1.92□□□□□ -2.1
SCARNA15-201ENST00000607520 GPR98Q8WXG9 6306 aa1.9□□□□□ -2.11
SCARNA15-201ENST00000607520 MT1GP13640 62 aa1.89□□□□□ -2.11
SCARNA15-201ENST00000607520 MT3P25713 68 aa1.88□□□□□ -2.11
SCARNA15-201ENST00000607520 INE1O15225 51 aa1.87□□□□□ -2.11
SCARNA15-201ENST00000607520 KRTAP2-3P0C7H8 128 aa1.86□□□□□ -2.11
SCARNA15-201ENST00000607520 KRTAP2-4Q9BYR9 128 aa1.86□□□□□ -2.11
SCARNA15-201ENST00000607520 KRTAP5-3Q6L8H2 238 aa1.85□□□□□ -2.11
SCARNA15-201ENST00000607520 KRTAP19-3Q7Z4W3 81 aa1.85□□□□□ -2.11
SCARNA15-201ENST00000607520 USH2AO75445 5202 aa1.85□□□□□ -2.11
SCARNA15-201ENST00000607520 KRTAP2-2Q9BYT5 123 aa1.85□□□□□ -2.11
SCARNA15-201ENST00000607520 SYNE2Q8WXH0 6885 aaKnown RBP1.83□□□□□ -2.12
SCARNA15-201ENST00000607520 SPRR5A0A1B0GTR4 108 aa1.83□□□□□ -2.12
SCARNA15-201ENST00000607520 KRTAP12-4P60329 112 aa1.82□□□□□ -2.12
SCARNA15-201ENST00000607520 MT1EP04732 61 aa1.81□□□□□ -2.12
SCARNA15-201ENST00000607520 KRTAP2-1Q9BYU5 128 aa1.8□□□□□ -2.12
SCARNA15-201ENST00000607520 LCE3CQ5T5A8 94 aa1.8□□□□□ -2.12
SCARNA15-201ENST00000607520 FCGBPQ9Y6R7 5405 aaPredicted RBP1.8□□□□□ -2.12
SCARNA15-201ENST00000607520 SSPOA2VEC9 5147 aa1.77□□□□□ -2.13
SCARNA15-201ENST00000607520 MT1LQ93083 61 aa1.76□□□□□ -2.13
SCARNA15-201ENST00000607520 MACF1Q9UPN3 7388 aaKnown RBP1.75□□□□□ -2.13
SCARNA15-201ENST00000607520 MT1MQ8N339 61 aa1.75□□□□□ -2.13
SCARNA15-201ENST00000607520 KRTAP5-9P26371 169 aa1.74□□□□□ -2.13
SCARNA15-201ENST00000607520 MT4P47944 62 aa1.73□□□□□ -2.13
SCARNA15-201ENST00000607520 KRTAP19-7Q3SYF9 63 aa1.72□□□□□ -2.13
SCARNA15-201ENST00000607520 LCE1FQ5T754 118 aa1.71□□□□□ -2.14
SCARNA15-201ENST00000607520 KMT2DO14686 5537 aa1.71□□□□□ -2.14
SCARNA15-201ENST00000607520 NEBP20929 6669 aa1.69□□□□□ -2.14
SCARNA15-201ENST00000607520 SYNE1Q8NF91 8797 aaKnown RBP1.67□□□□□ -2.14
SCARNA15-201ENST00000607520 KRTAP4-3Q9BYR4 195 aa1.64□□□□□ -2.15
SCARNA15-201ENST00000607520 MDN1Q9NU22 5596 aa1.61□□□□□ -2.15
SCARNA15-201ENST00000607520 LCE1EQ5T753 118 aa1.59□□□□□ -2.15
SCARNA15-201ENST00000607520 MUC5BQ9HC84 5762 aaPredicted RBP1.59□□□□□ -2.16
SCARNA15-201ENST00000607520 DSTQ03001 7570 aaKnown RBP1.58□□□□□ -2.16
SCARNA15-201ENST00000607520 MT1AP04731 61 aa1.57□□□□□ -2.16
SCARNA15-201ENST00000607520 MUC12Q9UKN1 5478 aa1.56□□□□□ -2.16
SCARNA15-201ENST00000607520 KRTAP9-6A8MVA2 160 aa1.55□□□□□ -2.16
SCARNA15-201ENST00000607520 AHNAKQ09666 5890 aaKnown RBP1.52□□□□□ -2.17
SCARNA15-201ENST00000607520 KRTAP5-11Q6L8G4 156 aa1.51□□□□□ -2.17
SCARNA15-201ENST00000607520 OBSCNQ5VST9 7968 aa1.49□□□□□ -2.17
SCARNA15-201ENST00000607520 LCE3DQ9BYE3 92 aa1.48□□□□□ -2.17
SCARNA15-201ENST00000607520 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.47□□□□□ -2.17
SCARNA15-201ENST00000607520 KRTAP6-1Q3LI64 71 aa1.47□□□□□ -2.17
SCARNA15-201ENST00000607520 LCE3EQ5T5B0 92 aa1.45□□□□□ -2.18
SCARNA15-201ENST00000607520 KRTAP6-2Q3LI66 62 aa1.45□□□□□ -2.18
SCARNA15-201ENST00000607520 KRTAP5-7Q6L8G8 165 aa1.45□□□□□ -2.18
SCARNA15-201ENST00000607520 LCE1BQ5T7P3 118 aa1.44□□□□□ -2.18
SCARNA15-201ENST00000607520 KRTAP20-2Q3LI61 65 aa1.44□□□□□ -2.18
SCARNA15-201ENST00000607520 KRTAP5-4Q6L8H1 288 aa1.41□□□□□ -2.18
SCARNA15-201ENST00000607520 HMCN1Q96RW7 5635 aa1.36□□□□□ -2.19
SCARNA15-201ENST00000607520 PRM1P04553 51 aa1.34□□□□□ -2.19
SCARNA15-201ENST00000607520 KRTAP5-5Q701N2 237 aaPredicted RBP1.31□□□□□ -2.2
SCARNA15-201ENST00000607520 AHNAK2Q8IVF2 5795 aa1.29□□□□□ -2.2
SCARNA15-201ENST00000607520 KRTAP5-2Q701N4 177 aa1.28□□□□□ -2.2
SCARNA15-201ENST00000607520 KRTAP5-10Q6L8G5 202 aa1.23□□□□□ -2.21
SCARNA15-201ENST00000607520 KRTAP5-1Q6L8H4 278 aa1.23□□□□□ -2.21
SCARNA15-201ENST00000607520 LCE1CQ5T751 118 aa1.21□□□□□ -2.21
SCARNA15-201ENST00000607520 KRTAP5-8O75690 187 aa1.18□□□□□ -2.22
SCARNA15-201ENST00000607520 MUC5ACP98088 5654 aa1.17□□□□□ -2.22
SCARNA15-201ENST00000607520 KRTAP4-4Q9BYR3 166 aa1.16□□□□□ -2.22
SCARNA15-201ENST00000607520 MUC19Q7Z5P9 8384 aa1.1□□□□□ -2.23
SCARNA15-201ENST00000607520 PHGR1C9JFL3 82 aa0.94□□□□□ -2.26
SCARNA15-201ENST00000607520 KRTAP21-2Q3LI59 83 aa0.84□□□□□ -2.27
SCARNA15-201ENST00000607520 KRTAP21-1Q3LI58 79 aa0.82□□□□□ -2.28
SCARNA15-201ENST00000607520 MUC16Q8WXI7 14507 aa0.59□□□□□ -2.32
Retrieved 77 of 20,778 RNA–protein pairs in 127.6 ms