RNA–Protein interactions for RNA: ENST00000607388.1

RPF2-204, Transcript of ribosome production factor 2 homolog, humanhuman

TSL 1 (best)

Gene RPF2, Length 3,621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF2-204ENST00000607388 FCGBPQ9Y6R7 5405 aaPredicted RBP2.53□□□□□ -2.01
RPF2-204ENST00000607388 SSPOA2VEC9 5147 aa2.51□□□□□ -2.01
RPF2-204ENST00000607388 MT1XP80297 61 aa2.49□□□□□ -2.01
RPF2-204ENST00000607388 MT1BP07438 61 aa2.49□□□□□ -2.01
RPF2-204ENST00000607388 KRTAP10-5P60370 271 aa2.49□□□□□ -2.01
RPF2-204ENST00000607388 KRTAP19-5Q3LI72 72 aa2.47□□□□□ -2.01
RPF2-204ENST00000607388 KRTAP9-3Q9BYQ3 159 aa2.44□□□□□ -2.02
RPF2-204ENST00000607388 KRTAP8-1Q8IUC2 63 aa2.44□□□□□ -2.02
RPF2-204ENST00000607388 SPRR5A0A1B0GTR4 108 aa2.43□□□□□ -2.02
RPF2-204ENST00000607388 KRTAP4-11Q9BYQ6 195 aa2.43□□□□□ -2.02
RPF2-204ENST00000607388 SYNE2Q8WXH0 6885 aaKnown RBP2.4□□□□□ -2.02
RPF2-204ENST00000607388 MACF1Q9UPN3 7388 aaKnown RBP2.39□□□□□ -2.03
RPF2-204ENST00000607388 MUC12Q9UKN1 5478 aa2.39□□□□□ -2.03
RPF2-204ENST00000607388 KRTAP19-8Q3LI54 63 aa2.37□□□□□ -2.03
RPF2-204ENST00000607388 LCE3CQ5T5A8 94 aa2.35□□□□□ -2.03
RPF2-204ENST00000607388 LCE4AQ5TA78 99 aa2.31□□□□□ -2.04
RPF2-204ENST00000607388 KRTAP9-6A8MVA2 160 aa2.3□□□□□ -2.04
RPF2-204ENST00000607388 KRTAP4-3Q9BYR4 195 aa2.3□□□□□ -2.04
RPF2-204ENST00000607388 MT1GP13640 62 aa2.25□□□□□ -2.05
RPF2-204ENST00000607388 KRTAP19-6Q3LI70 58 aa2.23□□□□□ -2.05
RPF2-204ENST00000607388 MDN1Q9NU22 5596 aa2.23□□□□□ -2.05
RPF2-204ENST00000607388 KRTAP19-7Q3SYF9 63 aa2.2□□□□□ -2.06
RPF2-204ENST00000607388 KRTAP2-2Q9BYT5 123 aa2.18□□□□□ -2.06
RPF2-204ENST00000607388 KRTAP19-4Q3LI73 84 aa2.17□□□□□ -2.06
RPF2-204ENST00000607388 SPRR2FQ96RM1 72 aa2.16□□□□□ -2.06
RPF2-204ENST00000607388 LCE5AQ5TCM9 118 aa2.16□□□□□ -2.06
RPF2-204ENST00000607388 MT1LQ93083 61 aa2.16□□□□□ -2.06
RPF2-204ENST00000607388 KRTAP9-7A8MTY7 169 aa2.15□□□□□ -2.07
RPF2-204ENST00000607388 MT1EP04732 61 aa2.14□□□□□ -2.07
RPF2-204ENST00000607388 KRTAP12-4P60329 112 aa2.14□□□□□ -2.07
RPF2-204ENST00000607388 LCE1FQ5T754 118 aa2.06□□□□□ -2.08
RPF2-204ENST00000607388 HMCN1Q96RW7 5635 aa2.05□□□□□ -2.08
RPF2-204ENST00000607388 LCE1AQ5T7P2 110 aa2.05□□□□□ -2.08
RPF2-204ENST00000607388 SPRR2EP22531 72 aa2.04□□□□□ -2.08
RPF2-204ENST00000607388 SPRR2BP35325 72 aa2.04□□□□□ -2.08
RPF2-204ENST00000607388 SPRR2AP35326 72 aa2.04□□□□□ -2.08
RPF2-204ENST00000607388 KRTAP2-3P0C7H8 128 aa2.04□□□□□ -2.08
RPF2-204ENST00000607388 KRTAP2-4Q9BYR9 128 aa2.04□□□□□ -2.08
RPF2-204ENST00000607388 KRTAP2-1Q9BYU5 128 aa2.04□□□□□ -2.08
RPF2-204ENST00000607388 MT3P25713 68 aa2.03□□□□□ -2.08
RPF2-204ENST00000607388 LCE1EQ5T753 118 aa2.03□□□□□ -2.08
RPF2-204ENST00000607388 MT1MQ8N339 61 aa2.03□□□□□ -2.09
RPF2-204ENST00000607388 NEBP20929 6669 aa2.02□□□□□ -2.09
RPF2-204ENST00000607388 KRTAP6-3Q3LI67 103 aa2.02□□□□□ -2.09
RPF2-204ENST00000607388 KRTAP19-3Q7Z4W3 81 aa2.01□□□□□ -2.09
RPF2-204ENST00000607388 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.96□□□□□ -2.1
RPF2-204ENST00000607388 SPRR2DP22532 72 aa1.96□□□□□ -2.1
RPF2-204ENST00000607388 KRTAP5-9P26371 169 aa1.95□□□□□ -2.1
RPF2-204ENST00000607388 KRTAP6-1Q3LI64 71 aa1.92□□□□□ -2.1
RPF2-204ENST00000607388 LCE3DQ9BYE3 92 aa1.92□□□□□ -2.1
RPF2-204ENST00000607388 PRM1P04553 51 aa1.91□□□□□ -2.1
RPF2-204ENST00000607388 KRTAP20-1Q3LI63 56 aa1.87□□□□□ -2.11
RPF2-204ENST00000607388 LCE3EQ5T5B0 92 aa1.86□□□□□ -2.11
RPF2-204ENST00000607388 MUC19Q7Z5P9 8384 aa1.85□□□□□ -2.11
RPF2-204ENST00000607388 MT4P47944 62 aa1.8□□□□□ -2.12
RPF2-204ENST00000607388 GPR98Q8WXG9 6306 aa1.79□□□□□ -2.12
RPF2-204ENST00000607388 MUC5BQ9HC84 5762 aaPredicted RBP1.78□□□□□ -2.13
RPF2-204ENST00000607388 KRTAP6-2Q3LI66 62 aa1.77□□□□□ -2.13
RPF2-204ENST00000607388 MT1AP04731 61 aa1.76□□□□□ -2.13
RPF2-204ENST00000607388 KRTAP5-5Q701N2 237 aaPredicted RBP1.71□□□□□ -2.14
RPF2-204ENST00000607388 KRTAP5-4Q6L8H1 288 aa1.66□□□□□ -2.14
RPF2-204ENST00000607388 LCE1BQ5T7P3 118 aa1.64□□□□□ -2.15
RPF2-204ENST00000607388 AHNAKQ09666 5890 aaKnown RBP1.63□□□□□ -2.15
RPF2-204ENST00000607388 KRTAP5-7Q6L8G8 165 aa1.61□□□□□ -2.15
RPF2-204ENST00000607388 KRTAP5-11Q6L8G4 156 aa1.6□□□□□ -2.15
RPF2-204ENST00000607388 KRTAP20-2Q3LI61 65 aa1.57□□□□□ -2.16
RPF2-204ENST00000607388 MUC5ACP98088 5654 aa1.57□□□□□ -2.16
RPF2-204ENST00000607388 KRTAP5-1Q6L8H4 278 aa1.56□□□□□ -2.16
RPF2-204ENST00000607388 KRTAP4-4Q9BYR3 166 aa1.56□□□□□ -2.16
RPF2-204ENST00000607388 AHNAK2Q8IVF2 5795 aa1.54□□□□□ -2.16
RPF2-204ENST00000607388 KRTAP5-2Q701N4 177 aa1.47□□□□□ -2.17
RPF2-204ENST00000607388 KRTAP5-10Q6L8G5 202 aa1.44□□□□□ -2.18
RPF2-204ENST00000607388 KRTAP5-8O75690 187 aa1.35□□□□□ -2.19
RPF2-204ENST00000607388 LCE1CQ5T751 118 aa1.32□□□□□ -2.2
RPF2-204ENST00000607388 KRTAP21-2Q3LI59 83 aa1.11□□□□□ -2.23
RPF2-204ENST00000607388 KRTAP21-1Q3LI58 79 aa1.04□□□□□ -2.24
RPF2-204ENST00000607388 PHGR1C9JFL3 82 aa0.9□□□□□ -2.27
RPF2-204ENST00000607388 MUC16Q8WXI7 14507 aa0.61□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 9.8 ms