RNA–Protein interactions for RNA: ENST00000603380.5

ZNF559-213, Transcript of zinc finger protein 559, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF559, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF559-213ENST00000603380 SSPOA2VEC9 5147 aa3.59□□□□□ -1.84
ZNF559-213ENST00000603380 MT1EP04732 61 aa3.56□□□□□ -1.84
ZNF559-213ENST00000603380 LOC100996750A0A140TA64 210 aa3.55□□□□□ -1.84
ZNF559-213ENST00000603380 MT1GP13640 62 aa3.45□□□□□ -1.86
ZNF559-213ENST00000603380 KRTAP4-3Q9BYR4 195 aa3.45□□□□□ -1.86
ZNF559-213ENST00000603380 CRCT1Q9UGL9 99 aa3.44□□□□□ -1.86
ZNF559-213ENST00000603380 FCGBPQ9Y6R7 5405 aaPredicted RBP3.43□□□□□ -1.86
ZNF559-213ENST00000603380 KRTAP9-6A0A140TA67 174 aa3.39□□□□□ -1.87
ZNF559-213ENST00000603380 KRTAP4-9Q9BYQ8 210 aa3.36□□□□□ -1.87
ZNF559-213ENST00000603380 KRTAP19-6Q3LI70 58 aa3.35□□□□□ -1.87
ZNF559-213ENST00000603380 KRTAP9-7A8MTY7 169 aa3.35□□□□□ -1.87
ZNF559-213ENST00000603380 PRM1P04553 51 aa3.34□□□□□ -1.87
ZNF559-213ENST00000603380 MACF1Q9UPN3 7388 aaKnown RBP3.34□□□□□ -1.88
ZNF559-213ENST00000603380 KRTAP4-6Q9BYQ5 205 aa3.33□□□□□ -1.88
ZNF559-213ENST00000603380 KRTAP6-3Q3LI67 103 aa3.33□□□□□ -1.88
ZNF559-213ENST00000603380 KRTAP5-5Q701N2 237 aaPredicted RBP3.33□□□□□ -1.88
ZNF559-213ENST00000603380 SYNE2Q8WXH0 6885 aaKnown RBP3.31□□□□□ -1.88
ZNF559-213ENST00000603380 LCE3BQ5TA77 95 aa3.3□□□□□ -1.88
ZNF559-213ENST00000603380 MT1AP04731 61 aa3.3□□□□□ -1.88
ZNF559-213ENST00000603380 SYNE1Q8NF91 8797 aaKnown RBP3.29□□□□□ -1.88
ZNF559-213ENST00000603380 MT1MQ8N339 61 aa3.29□□□□□ -1.88
ZNF559-213ENST00000603380 KRTAP2-2Q9BYT5 123 aa3.26□□□□□ -1.89
ZNF559-213ENST00000603380 LCE3EQ5T5B0 92 aa3.24□□□□□ -1.89
ZNF559-213ENST00000603380 LCE3DQ9BYE3 92 aa3.24□□□□□ -1.89
ZNF559-213ENST00000603380 LCE1AQ5T7P2 110 aa3.22□□□□□ -1.89
ZNF559-213ENST00000603380 KRTAP19-3Q7Z4W3 81 aa3.21□□□□□ -1.9
ZNF559-213ENST00000603380 MUC12Q9UKN1 5478 aa3.21□□□□□ -1.9
ZNF559-213ENST00000603380 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.19□□□□□ -1.9
ZNF559-213ENST00000603380 DSTQ03001 7570 aaKnown RBP3.16□□□□□ -1.9
ZNF559-213ENST00000603380 KRTAP6-1Q3LI64 71 aa3.11□□□□□ -1.91
ZNF559-213ENST00000603380 MDN1Q9NU22 5596 aa3.11□□□□□ -1.91
ZNF559-213ENST00000603380 KRTAP6-2Q3LI66 62 aa3.09□□□□□ -1.91
ZNF559-213ENST00000603380 SPRR2FQ96RM1 72 aa3.06□□□□□ -1.92
ZNF559-213ENST00000603380 LCE5AQ5TCM9 118 aa3.05□□□□□ -1.92
ZNF559-213ENST00000603380 LCE1EQ5T753 118 aa2.99□□□□□ -1.93
ZNF559-213ENST00000603380 KRTAP5-9P26371 169 aa2.96□□□□□ -1.93
ZNF559-213ENST00000603380 OBSCNQ5VST9 7968 aa2.93□□□□□ -1.94
ZNF559-213ENST00000603380 SPRR2EP22531 72 aa2.92□□□□□ -1.94
ZNF559-213ENST00000603380 SPRR2BP35325 72 aa2.92□□□□□ -1.94
ZNF559-213ENST00000603380 SPRR2AP35326 72 aa2.92□□□□□ -1.94
ZNF559-213ENST00000603380 NEBP20929 6669 aa2.9□□□□□ -1.94
ZNF559-213ENST00000603380 LCE1DQ5T752 114 aa2.88□□□□□ -1.95
ZNF559-213ENST00000603380 SPRR2DP22532 72 aa2.81□□□□□ -1.96
ZNF559-213ENST00000603380 KRTAP9-4Q9BYQ2 154 aa2.8□□□□□ -1.96
ZNF559-213ENST00000603380 KRTAP20-1Q3LI63 56 aa2.7□□□□□ -1.98
ZNF559-213ENST00000603380 MT3P25713 68 aa2.66□□□□□ -1.98
ZNF559-213ENST00000603380 KRTAP4-12Q9BQ66 201 aa2.61□□□□□ -1.99
ZNF559-213ENST00000603380 KRTAP9-9Q9BYP9 154 aa2.59□□□□□ -2
ZNF559-213ENST00000603380 MT4P47944 62 aa2.51□□□□□ -2.01
ZNF559-213ENST00000603380 KRTAP5-3Q6L8H2 238 aa2.51□□□□□ -2.01
ZNF559-213ENST00000603380 KRTAP4-2Q9BYR5 136 aa2.5□□□□□ -2.01
ZNF559-213ENST00000603380 KRTAP4-11Q9BYQ6 195 aa2.48□□□□□ -2.01
ZNF559-213ENST00000603380 HMCN1Q96RW7 5635 aa2.47□□□□□ -2.01
ZNF559-213ENST00000603380 LCE1FQ5T754 118 aa2.44□□□□□ -2.02
ZNF559-213ENST00000603380 KRTAP5-4Q6L8H1 288 aa2.43□□□□□ -2.02
ZNF559-213ENST00000603380 LCE4AQ5TA78 99 aa2.4□□□□□ -2.02
ZNF559-213ENST00000603380 MUC5ACP98088 5654 aa2.4□□□□□ -2.02
ZNF559-213ENST00000603380 KRTAP5-10Q6L8G5 202 aa2.34□□□□□ -2.04
ZNF559-213ENST00000603380 KRTAP20-2Q3LI61 65 aa2.33□□□□□ -2.04
ZNF559-213ENST00000603380 KRTAP5-1Q6L8H4 278 aa2.23□□□□□ -2.05
ZNF559-213ENST00000603380 AHNAK2Q8IVF2 5795 aa2.21□□□□□ -2.06
ZNF559-213ENST00000603380 KRTAP5-2Q701N4 177 aa2.2□□□□□ -2.06
ZNF559-213ENST00000603380 GPR98Q8WXG9 6306 aa2.18□□□□□ -2.06
ZNF559-213ENST00000603380 KRTAP21-1Q3LI58 79 aa2.17□□□□□ -2.06
ZNF559-213ENST00000603380 MUC19Q7Z5P9 8384 aa2.16□□□□□ -2.06
ZNF559-213ENST00000603380 LCE1BQ5T7P3 118 aa2.1□□□□□ -2.07
ZNF559-213ENST00000603380 LCE1CQ5T751 118 aa2.02□□□□□ -2.09
ZNF559-213ENST00000603380 KRTAP21-2Q3LI59 83 aa1.99□□□□□ -2.09
ZNF559-213ENST00000603380 KRTAP5-8O75690 187 aa1.98□□□□□ -2.09
ZNF559-213ENST00000603380 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.93□□□□□ -2.1
ZNF559-213ENST00000603380 KRTAP5-7Q6L8G8 165 aa1.93□□□□□ -2.1
ZNF559-213ENST00000603380 MUC5BQ9HC84 5762 aaPredicted RBP1.89□□□□□ -2.11
ZNF559-213ENST00000603380 KRTAP4-4Q9BYR3 166 aa1.84□□□□□ -2.11
ZNF559-213ENST00000603380 AHNAKQ09666 5890 aaKnown RBP1.76□□□□□ -2.13
ZNF559-213ENST00000603380 KRTAP5-11Q6L8G4 156 aa1.63□□□□□ -2.15
ZNF559-213ENST00000603380 PHGR1C9JFL3 82 aa1.42□□□□□ -2.18
ZNF559-213ENST00000603380 MUC16Q8WXI7 14507 aa1.08□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 13.2 ms