RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 SPRR2DP22532 72 aa5.08□□□□□ -1.6
RNF40-212ENST00000602784 KRTAP2-3P0C7H8 128 aa5.07□□□□□ -1.6
RNF40-212ENST00000602784 KRTAP2-4Q9BYR9 128 aa5.07□□□□□ -1.6
RNF40-212ENST00000602784 LCE5AQ5TCM9 118 aa5.04□□□□□ -1.6
RNF40-212ENST00000602784 KRTAP19-3Q7Z4W3 81 aa5.04□□□□□ -1.6
RNF40-212ENST00000602784 KRTAP19-4Q3LI73 84 aa5.02□□□□□ -1.61
RNF40-212ENST00000602784 KRTAP23-1A1A580 65 aa5.01□□□□□ -1.61
RNF40-212ENST00000602784 ROMO1P60602 79 aa5□□□□□ -1.61
RNF40-212ENST00000602784 MT1GP13640 62 aa4.98□□□□□ -1.61
RNF40-212ENST00000602784 KRTAP12-3P60328 96 aa4.98□□□□□ -1.61
RNF40-212ENST00000602784 MT1LQ93083 61 aa4.96□□□□□ -1.62
RNF40-212ENST00000602784 PP632Q6XCG6 107 aa4.93□□□□□ -1.62
RNF40-212ENST00000602784 LCE3BQ5TA77 95 aa4.92□□□□□ -1.62
RNF40-212ENST00000602784 KRTAP2-2Q9BYT5 123 aa4.92□□□□□ -1.62
RNF40-212ENST00000602784 KRTAP2-1Q9BYU5 128 aa4.92□□□□□ -1.62
RNF40-212ENST00000602784 MT1MQ8N339 61 aa4.87□□□□□ -1.63
RNF40-212ENST00000602784 BRK1Q8WUW1 75 aa4.86□□□□□ -1.63
RNF40-212ENST00000602784 KRTAP4-12Q9BQ66 201 aa4.83□□□□□ -1.64
RNF40-212ENST00000602784 DSTQ03001 7570 aaKnown RBP4.79□□□□□ -1.64
RNF40-212ENST00000602784 KRTAP15-1Q3LI76 137 aa4.75□□□□□ -1.65
RNF40-212ENST00000602784 KRTAP4-3Q9BYR4 195 aa4.7□□□□□ -1.66
RNF40-212ENST00000602784 KRTAP4-7Q9BYR0 210 aa4.69□□□□□ -1.66
RNF40-212ENST00000602784 LCE4AQ5TA78 99 aa4.65□□□□□ -1.67
RNF40-212ENST00000602784 PMAIP1Q13794 54 aa4.61□□□□□ -1.67
RNF40-212ENST00000602784 LCE3CQ5T5A8 94 aa4.61□□□□□ -1.67
RNF40-212ENST00000602784 KRTAP5-4Q6L8H1 288 aa4.51□□□□□ -1.69
RNF40-212ENST00000602784 KRTAP9-9Q9BYP9 154 aa4.51□□□□□ -1.69
RNF40-212ENST00000602784 KRTAP9-4Q9BYQ2 154 aa4.51□□□□□ -1.69
RNF40-212ENST00000602784 PRO0628Q9UI54 55 aa4.51□□□□□ -1.69
RNF40-212ENST00000602784 KRTAP4-9Q9BYQ8 210 aa4.48□□□□□ -1.69
RNF40-212ENST00000602784 KRTAP5-5Q701N2 237 aaPredicted RBP4.46□□□□□ -1.7
RNF40-212ENST00000602784 LCE1DQ5T752 114 aa4.43□□□□□ -1.7
RNF40-212ENST00000602784 MT4P47944 62 aa4.39□□□□□ -1.71
RNF40-212ENST00000602784 GPR98Q8WXG9 6306 aa4.37□□□□□ -1.71
RNF40-212ENST00000602784 A0A0A0MQY5 61 aa4.37□□□□□ -1.71
RNF40-212ENST00000602784 HMCN1Q96RW7 5635 aa4.34□□□□□ -1.71
RNF40-212ENST00000602784 KRTAP9-6A8MVA2 160 aa4.32□□□□□ -1.72
RNF40-212ENST00000602784 PRAC1Q96KF2 57 aa4.32□□□□□ -1.72
RNF40-212ENST00000602784 KRTAP12-4P60329 112 aa4.28□□□□□ -1.72
RNF40-212ENST00000602784 SPRR5A0A1B0GTR4 108 aa4.27□□□□□ -1.73
RNF40-212ENST00000602784 MT1AP04731 61 aa4.23□□□□□ -1.73
RNF40-212ENST00000602784 KTN1-AS1Q86SY8 53 aa4.23□□□□□ -1.73
RNF40-212ENST00000602784 KRTAP20-2Q3LI61 65 aa4.22□□□□□ -1.73
RNF40-212ENST00000602784 SYNE1Q8NF91 8797 aaKnown RBP4.18□□□□□ -1.74
RNF40-212ENST00000602784 KRTAP6-1Q3LI64 71 aa4.17□□□□□ -1.74
RNF40-212ENST00000602784 KRTAP4-11Q9BYQ6 195 aa4.1□□□□□ -1.75
RNF40-212ENST00000602784 KRTAP5-3Q6L8H2 238 aa4.09□□□□□ -1.75
RNF40-212ENST00000602784 AHNAK2Q8IVF2 5795 aa4.07□□□□□ -1.76
RNF40-212ENST00000602784 KRTAP5-2Q701N4 177 aa4□□□□□ -1.77
RNF40-212ENST00000602784 KRTAP5-10Q6L8G5 202 aa3.99□□□□□ -1.77
RNF40-212ENST00000602784 KRTAP4-2Q9BYR5 136 aa3.99□□□□□ -1.77
RNF40-212ENST00000602784 KRTAP6-2Q3LI66 62 aa3.93□□□□□ -1.78
RNF40-212ENST00000602784 MT3P25713 68 aa3.87□□□□□ -1.79
RNF40-212ENST00000602784 KRTAP5-7Q6L8G8 165 aa3.81□□□□□ -1.8
RNF40-212ENST00000602784 KRTAP5-8O75690 187 aa3.66□□□□□ -1.82
RNF40-212ENST00000602784 LUZP6Q538Z0 58 aa3.66□□□□□ -1.82
RNF40-212ENST00000602784 OBSCNQ5VST9 7968 aa3.62□□□□□ -1.83
RNF40-212ENST00000602784 KRTAP5-1Q6L8H4 278 aa3.53□□□□□ -1.84
RNF40-212ENST00000602784 LCE1EQ5T753 118 aa3.52□□□□□ -1.85
RNF40-212ENST00000602784 MUC5ACP98088 5654 aa3.4□□□□□ -1.87
RNF40-212ENST00000602784 LCE3DQ9BYE3 92 aa3.38□□□□□ -1.87
RNF40-212ENST00000602784 NDUFAF8A1L188 74 aa3.37□□□□□ -1.87
RNF40-212ENST00000602784 MUC5BQ9HC84 5762 aaPredicted RBP3.31□□□□□ -1.88
RNF40-212ENST00000602784 AHNAKQ09666 5890 aaKnown RBP3.28□□□□□ -1.88
RNF40-212ENST00000602784 LCE1CQ5T751 118 aa3.26□□□□□ -1.89
RNF40-212ENST00000602784 LCE1BQ5T7P3 118 aa3.26□□□□□ -1.89
RNF40-212ENST00000602784 LCE3EQ5T5B0 92 aa3.22□□□□□ -1.89
RNF40-212ENST00000602784 LCE1FQ5T754 118 aa3.17□□□□□ -1.9
RNF40-212ENST00000602784 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.01□□□□□ -1.93
RNF40-212ENST00000602784 KRTAP5-11Q6L8G4 156 aa2.91□□□□□ -1.94
RNF40-212ENST00000602784 KRTAP21-2Q3LI59 83 aa2.76□□□□□ -1.97
RNF40-212ENST00000602784 INE1O15225 51 aa2.63□□□□□ -1.99
RNF40-212ENST00000602784 PRM1P04553 51 aa2.54□□□□□ -2
RNF40-212ENST00000602784 PHGR1C9JFL3 82 aa2.5□□□□□ -2.01
RNF40-212ENST00000602784 KRTAP4-4Q9BYR3 166 aa2.44□□□□□ -2.02
RNF40-212ENST00000602784 MUC19Q7Z5P9 8384 aa2.23□□□□□ -2.05
RNF40-212ENST00000602784 KRTAP21-1Q3LI58 79 aa1.77□□□□□ -2.13
RNF40-212ENST00000602784 MUC16Q8WXI7 14507 aa1.66□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 58.7 ms