RNA–Protein interactions for RNA: ENST00000602272.5

FARP1-241, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-241ENST00000602272 KRTAP13-4Q3LI77 160 aa2.86□□□□□ -1.95
FARP1-241ENST00000602272 MT1XP80297 61 aa2.84□□□□□ -1.95
FARP1-241ENST00000602272 PRO2289Q9P1D8 64 aa2.84□□□□□ -1.95
FARP1-241ENST00000602272 A0A1B0GU69 56 aa2.83□□□□□ -1.96
FARP1-241ENST00000602272 MACF1Q9UPN3 7388 aaKnown RBP2.82□□□□□ -1.96
FARP1-241ENST00000602272 A0A1B0GU33 70 aa2.82□□□□□ -1.96
FARP1-241ENST00000602272 SPATA8Q6RVD6 105 aa2.8□□□□□ -1.96
FARP1-241ENST00000602272 SYNE2Q8WXH0 6885 aaKnown RBP2.79□□□□□ -1.96
FARP1-241ENST00000602272 LINC01558Q9Y6Z2 57 aa2.79□□□□□ -1.96
FARP1-241ENST00000602272 PRR15LQ9BU68 103 aa2.78□□□□□ -1.96
FARP1-241ENST00000602272 A0A0D9SG42 100 aa2.76□□□□□ -1.97
FARP1-241ENST00000602272 KRTAP6-3Q3LI67 103 aa2.76□□□□□ -1.97
FARP1-241ENST00000602272 SMIM26A0A096LP01 95 aa2.74□□□□□ -1.97
FARP1-241ENST00000602272 KRTAP12-1P59990 96 aa2.74□□□□□ -1.97
FARP1-241ENST00000602272 SPINT4Q6UDR6 99 aa2.72□□□□□ -1.97
FARP1-241ENST00000602272 V9GYY9 64 aa2.7□□□□□ -1.98
FARP1-241ENST00000602272 UQCR11O14957 56 aa2.69□□□□□ -1.98
FARP1-241ENST00000602272 Q1T7F1 81 aa2.69□□□□□ -1.98
FARP1-241ENST00000602272 KRTAP8-1Q8IUC2 63 aa2.67□□□□□ -1.98
FARP1-241ENST00000602272 PSPHP1O15172 72 aa2.66□□□□□ -1.98
FARP1-241ENST00000602272 RPS28P62857 69 aaKnown RBP2.66□□□□□ -1.98
FARP1-241ENST00000602272 KMT2DO14686 5537 aa2.64□□□□□ -1.99
FARP1-241ENST00000602272 MIR22HGQ0VDD5 57 aa2.64□□□□□ -1.99
FARP1-241ENST00000602272 SPRR2FQ96RM1 72 aa2.64□□□□□ -1.99
FARP1-241ENST00000602272 NEBP20929 6669 aa2.61□□□□□ -1.99
FARP1-241ENST00000602272 KRTAP5-7Q6L8G8 165 aa2.6□□□□□ -1.99
FARP1-241ENST00000602272 C10orf95Q9H7T3 257 aa2.6□□□□□ -1.99
FARP1-241ENST00000602272 MUC12Q9UKN1 5478 aa2.6□□□□□ -1.99
FARP1-241ENST00000602272 MUC19Q7Z5P9 8384 aa2.59□□□□□ -1.99
FARP1-241ENST00000602272 A6NED7 52 aa2.58□□□□□ -2
FARP1-241ENST00000602272 SPRR2EP22531 72 aa2.57□□□□□ -2
FARP1-241ENST00000602272 SPRR2BP35325 72 aa2.57□□□□□ -2
FARP1-241ENST00000602272 SPRR2AP35326 72 aa2.57□□□□□ -2
FARP1-241ENST00000602272 K7ERS5 55 aa2.56□□□□□ -2
FARP1-241ENST00000602272 TNP1P09430 55 aa2.56□□□□□ -2
FARP1-241ENST00000602272 MDN1Q9NU22 5596 aa2.55□□□□□ -2
FARP1-241ENST00000602272 KRTAP19-7Q3SYF9 63 aa2.54□□□□□ -2
FARP1-241ENST00000602272 MT1EP04732 61 aa2.51□□□□□ -2.01
FARP1-241ENST00000602272 KRTAP20-1Q3LI63 56 aa2.5□□□□□ -2.01
FARP1-241ENST00000602272 KRTAP19-5Q3LI72 72 aa2.5□□□□□ -2.01
FARP1-241ENST00000602272 CDC42SE1Q9NRR8 79 aa2.5□□□□□ -2.01
FARP1-241ENST00000602272 KRTAP25-1Q3LHN0 102 aa2.49□□□□□ -2.01
FARP1-241ENST00000602272 SPRR2DP22532 72 aa2.48□□□□□ -2.01
FARP1-241ENST00000602272 KRTAP2-3P0C7H8 128 aa2.46□□□□□ -2.02
FARP1-241ENST00000602272 KRTAP19-3Q7Z4W3 81 aa2.46□□□□□ -2.02
FARP1-241ENST00000602272 KRTAP2-4Q9BYR9 128 aa2.46□□□□□ -2.02
FARP1-241ENST00000602272 KRTAP12-3P60328 96 aa2.42□□□□□ -2.02
FARP1-241ENST00000602272 ROMO1P60602 79 aa2.42□□□□□ -2.02
FARP1-241ENST00000602272 MT1LQ93083 61 aa2.42□□□□□ -2.02
FARP1-241ENST00000602272 MT1GP13640 62 aa2.41□□□□□ -2.02
FARP1-241ENST00000602272 KRTAP2-1Q9BYU5 128 aa2.39□□□□□ -2.03
FARP1-241ENST00000602272 MT1MQ8N339 61 aa2.38□□□□□ -2.03
FARP1-241ENST00000602272 BRK1Q8WUW1 75 aa2.36□□□□□ -2.03
FARP1-241ENST00000602272 LUZP6Q538Z0 58 aa2.33□□□□□ -2.04
FARP1-241ENST00000602272 KRTAP21-2Q3LI59 83 aa2.27□□□□□ -2.05
FARP1-241ENST00000602272 DSTQ03001 7570 aaKnown RBP2.26□□□□□ -2.05
FARP1-241ENST00000602272 PMAIP1Q13794 54 aa2.21□□□□□ -2.06
FARP1-241ENST00000602272 KRTAP12-4P60329 112 aa2.16□□□□□ -2.06
FARP1-241ENST00000602272 PRO0628Q9UI54 55 aa2.16□□□□□ -2.06
FARP1-241ENST00000602272 MT4P47944 62 aa2.15□□□□□ -2.07
FARP1-241ENST00000602272 HMCN1Q96RW7 5635 aa2.11□□□□□ -2.07
FARP1-241ENST00000602272 MT1AP04731 61 aa2.06□□□□□ -2.08
FARP1-241ENST00000602272 KRTAP20-2Q3LI61 65 aa2.06□□□□□ -2.08
FARP1-241ENST00000602272 KTN1-AS1Q86SY8 53 aa2.05□□□□□ -2.08
FARP1-241ENST00000602272 KRTAP6-1Q3LI64 71 aa2.04□□□□□ -2.08
FARP1-241ENST00000602272 SYNE1Q8NF91 8797 aaKnown RBP2.03□□□□□ -2.08
FARP1-241ENST00000602272 GPR98Q8WXG9 6306 aa2.02□□□□□ -2.09
FARP1-241ENST00000602272 AHNAK2Q8IVF2 5795 aa1.96□□□□□ -2.1
FARP1-241ENST00000602272 KRTAP5-10Q6L8G5 202 aa1.95□□□□□ -2.1
FARP1-241ENST00000602272 KRTAP6-2Q3LI66 62 aa1.92□□□□□ -2.1
FARP1-241ENST00000602272 MUC5ACP98088 5654 aa1.63□□□□□ -2.15
FARP1-241ENST00000602272 AHNAKQ09666 5890 aaKnown RBP1.58□□□□□ -2.16
FARP1-241ENST00000602272 MUC5BQ9HC84 5762 aaPredicted RBP1.58□□□□□ -2.16
FARP1-241ENST00000602272 INE1O15225 51 aa1.26□□□□□ -2.21
FARP1-241ENST00000602272 PRM1P04553 51 aa1.25□□□□□ -2.21
FARP1-241ENST00000602272 PHGR1C9JFL3 82 aa1.21□□□□□ -2.22
FARP1-241ENST00000602272 MUC16Q8WXI7 14507 aa1.11□□□□□ -2.23
FARP1-241ENST00000602272 KRTAP21-1Q3LI58 79 aa0.85□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 97.2 ms