RNA–Protein interactions for RNA: ENST00000601869.1

STRN4-222, Transcript of striatin 4, human

Gene STRN4, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRN4-222	ENST00000601869	KRTAP19-6	Q3LI70	58 aa		6.54	□□□□□ -1.36
STRN4-222	ENST00000601869	MT1E	P04732	61 aa		6.49	□□□□□ -1.37
STRN4-222	ENST00000601869	KRTAP9-6	A0A140TA67	174 aa		6.44	□□□□□ -1.38
STRN4-222	ENST00000601869	LCE2D	Q5TA82	110 aa	Predicted RBP	6.44	□□□□□ -1.38
STRN4-222	ENST00000601869	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	6.24	□□□□□ -1.41
STRN4-222	ENST00000601869	KRTAP12-4	P60329	112 aa		6.22	□□□□□ -1.41
STRN4-222	ENST00000601869	CRCT1	Q9UGL9	99 aa		6.16	□□□□□ -1.42
STRN4-222	ENST00000601869	LOC100996750	A0A140TA64	210 aa		6.1	□□□□□ -1.43
STRN4-222	ENST00000601869	MT1G	P13640	62 aa		6.09	□□□□□ -1.44
STRN4-222	ENST00000601869	MT1M	Q8N339	61 aa		6.04	□□□□□ -1.44
STRN4-222	ENST00000601869	MUC12	Q9UKN1	5478 aa		6.02	□□□□□ -1.45
STRN4-222	ENST00000601869	KRTAP4-3	Q9BYR4	195 aa		6.01	□□□□□ -1.45
STRN4-222	ENST00000601869	KRTAP19-3	Q7Z4W3	81 aa		6	□□□□□ -1.45
STRN4-222	ENST00000601869	MACF1	Q9UPN3	7388 aa	Known RBP	5.92	□□□□□ -1.46
STRN4-222	ENST00000601869	SPRR2F	Q96RM1	72 aa		5.92	□□□□□ -1.46
STRN4-222	ENST00000601869	MT1A	P04731	61 aa		5.89	□□□□□ -1.47
STRN4-222	ENST00000601869	LCE5A	Q5TCM9	118 aa		5.83	□□□□□ -1.48
STRN4-222	ENST00000601869	SYNE2	Q8WXH0	6885 aa	Known RBP	5.79	□□□□□ -1.48
STRN4-222	ENST00000601869	KRTAP9-7	A8MTY7	169 aa		5.75	□□□□□ -1.49
STRN4-222	ENST00000601869	LCE3B	Q5TA77	95 aa		5.75	□□□□□ -1.49
STRN4-222	ENST00000601869	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	5.74	□□□□□ -1.49
STRN4-222	ENST00000601869	LCE3E	Q5T5B0	92 aa		5.66	□□□□□ -1.5
STRN4-222	ENST00000601869	LCE3D	Q9BYE3	92 aa		5.66	□□□□□ -1.5
STRN4-222	ENST00000601869	DST	Q03001	7570 aa	Known RBP	5.64	□□□□□ -1.51
STRN4-222	ENST00000601869	KRTAP5-9	P26371	169 aa		5.64	□□□□□ -1.51
STRN4-222	ENST00000601869	KRTAP4-9	Q9BYQ8	210 aa		5.62	□□□□□ -1.51
STRN4-222	ENST00000601869	MDN1	Q9NU22	5596 aa		5.62	□□□□□ -1.51
STRN4-222	ENST00000601869	LCE1A	Q5T7P2	110 aa		5.58	□□□□□ -1.52
STRN4-222	ENST00000601869	KRTAP5-5	Q701N2	237 aa	Predicted RBP	5.57	□□□□□ -1.52
STRN4-222	ENST00000601869	PRM1	P04553	51 aa		5.55	□□□□□ -1.52
STRN4-222	ENST00000601869	KRTAP6-1	Q3LI64	71 aa		5.53	□□□□□ -1.52
STRN4-222	ENST00000601869	SPRR2E	P22531	72 aa		5.48	□□□□□ -1.53
STRN4-222	ENST00000601869	SPRR2B	P35325	72 aa		5.48	□□□□□ -1.53
STRN4-222	ENST00000601869	SPRR2A	P35326	72 aa		5.48	□□□□□ -1.53
STRN4-222	ENST00000601869	KRTAP6-3	Q3LI67	103 aa		5.42	□□□□□ -1.54
STRN4-222	ENST00000601869	SYNE1	Q8NF91	8797 aa	Known RBP	5.41	□□□□□ -1.54
STRN4-222	ENST00000601869	NEB	P20929	6669 aa		5.27	□□□□□ -1.57
STRN4-222	ENST00000601869	SPRR2D	P22532	72 aa		5.25	□□□□□ -1.57
STRN4-222	ENST00000601869	KRTAP6-2	Q3LI66	62 aa		5.25	□□□□□ -1.57
STRN4-222	ENST00000601869	KRTAP9-4	Q9BYQ2	154 aa		5.16	□□□□□ -1.58
STRN4-222	ENST00000601869	KRTAP20-1	Q3LI63	56 aa		5.01	□□□□□ -1.61
STRN4-222	ENST00000601869	KRTAP2-2	Q9BYT5	123 aa		5	□□□□□ -1.61
STRN4-222	ENST00000601869	MT3	P25713	68 aa		4.96	□□□□□ -1.62
STRN4-222	ENST00000601869	KRTAP5-4	Q6L8H1	288 aa		4.82	□□□□□ -1.64
STRN4-222	ENST00000601869	KRTAP4-6	Q9BYQ5	205 aa		4.62	□□□□□ -1.67
STRN4-222	ENST00000601869	MT4	P47944	62 aa		4.61	□□□□□ -1.67
STRN4-222	ENST00000601869	LCE4A	Q5TA78	99 aa		4.6	□□□□□ -1.67
STRN4-222	ENST00000601869	OBSCN	Q5VST9	7968 aa		4.53	□□□□□ -1.68
STRN4-222	ENST00000601869	KRTAP20-2	Q3LI61	65 aa		4.52	□□□□□ -1.69
STRN4-222	ENST00000601869	KRTAP5-2	Q701N4	177 aa		4.46	□□□□□ -1.7
STRN4-222	ENST00000601869	HMCN1	Q96RW7	5635 aa		4.44	□□□□□ -1.7
STRN4-222	ENST00000601869	LCE1D	Q5T752	114 aa		4.41	□□□□□ -1.7
STRN4-222	ENST00000601869	GPR98	Q8WXG9	6306 aa		4.41	□□□□□ -1.7
STRN4-222	ENST00000601869	KRTAP5-3	Q6L8H2	238 aa		4.32	□□□□□ -1.72
STRN4-222	ENST00000601869	LCE1E	Q5T753	118 aa		4.3	□□□□□ -1.72
STRN4-222	ENST00000601869	MUC5AC	P98088	5654 aa		4.13	□□□□□ -1.75
STRN4-222	ENST00000601869	KRTAP5-10	Q6L8G5	202 aa		4.09	□□□□□ -1.76
STRN4-222	ENST00000601869	KRTAP4-11	Q9BYQ6	195 aa		4.09	□□□□□ -1.76
STRN4-222	ENST00000601869	AHNAK2	Q8IVF2	5795 aa		4.05	□□□□□ -1.76
STRN4-222	ENST00000601869	KRTAP5-1	Q6L8H4	278 aa		4.01	□□□□□ -1.77
STRN4-222	ENST00000601869	LCE1B	Q5T7P3	118 aa		3.87	□□□□□ -1.79
STRN4-222	ENST00000601869	KRTAP5-7	Q6L8G8	165 aa		3.83	□□□□□ -1.8
STRN4-222	ENST00000601869	LCE1C	Q5T751	118 aa		3.78	□□□□□ -1.8
STRN4-222	ENST00000601869	KRTAP4-2	Q9BYR5	136 aa		3.78	□□□□□ -1.8
STRN4-222	ENST00000601869	KRTAP5-8	O75690	187 aa		3.65	□□□□□ -1.83
STRN4-222	ENST00000601869	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.64	□□□□□ -1.83
STRN4-222	ENST00000601869	KRTAP21-1	Q3LI58	79 aa		3.63	□□□□□ -1.83
STRN4-222	ENST00000601869	KRTAP21-2	Q3LI59	83 aa		3.58	□□□□□ -1.84
STRN4-222	ENST00000601869	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.41	□□□□□ -1.86
STRN4-222	ENST00000601869	AHNAK	Q09666	5890 aa	Known RBP	3.35	□□□□□ -1.87
STRN4-222	ENST00000601869	KRTAP5-11	Q6L8G4	156 aa		3.27	□□□□□ -1.89
STRN4-222	ENST00000601869	KRTAP9-9	Q9BYP9	154 aa		3.27	□□□□□ -1.89
STRN4-222	ENST00000601869	LCE1F	Q5T754	118 aa		3.26	□□□□□ -1.89
STRN4-222	ENST00000601869	KRTAP4-4	Q9BYR3	166 aa		3.12	□□□□□ -1.91
STRN4-222	ENST00000601869	KRTAP4-12	Q9BQ66	201 aa		3.08	□□□□□ -1.92
STRN4-222	ENST00000601869	MUC19	Q7Z5P9	8384 aa		2.98	□□□□□ -1.93
STRN4-222	ENST00000601869	PHGR1	C9JFL3	82 aa		2.82	□□□□□ -1.96
STRN4-222	ENST00000601869	MUC16	Q8WXI7	14507 aa		1.9	□□□□□ -2.11

Retrieved 78 of 20,778 RNA–protein pairs in 11.2 ms