RNA–Protein interactions for RNA: ENST00000601372.5

ZNF558-207, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZNF558, Length 7,032 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-207ENST00000601372 KRTAP9-7A8MTY7 169 aa3.72□□□□□ -1.81
ZNF558-207ENST00000601372 MT1EP04732 61 aa3.69□□□□□ -1.82
ZNF558-207ENST00000601372 UBR4Q5T4S7 5183 aa3.67□□□□□ -1.82
ZNF558-207ENST00000601372 MT4P47944 62 aa3.66□□□□□ -1.82
ZNF558-207ENST00000601372 RNF213Q63HN8 5207 aa3.66□□□□□ -1.82
ZNF558-207ENST00000601372 MT1LQ93083 61 aa3.65□□□□□ -1.82
ZNF558-207ENST00000601372 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.63□□□□□ -1.83
ZNF558-207ENST00000601372 KRTAP20-1Q3LI63 56 aa3.62□□□□□ -1.83
ZNF558-207ENST00000601372 LOC100996750A0A140TA64 210 aa3.61□□□□□ -1.83
ZNF558-207ENST00000601372 FSIP2Q5CZC0 6907 aa3.6□□□□□ -1.83
ZNF558-207ENST00000601372 MT1MQ8N339 61 aa3.57□□□□□ -1.84
ZNF558-207ENST00000601372 KRTAP4-3Q9BYR4 195 aa3.57□□□□□ -1.84
ZNF558-207ENST00000601372 KRTAP6-3Q3LI67 103 aa3.56□□□□□ -1.84
ZNF558-207ENST00000601372 KRTAP19-7Q3SYF9 63 aa3.46□□□□□ -1.86
ZNF558-207ENST00000601372 KRTAP2-3P0C7H8 128 aa3.44□□□□□ -1.86
ZNF558-207ENST00000601372 KRTAP2-4Q9BYR9 128 aa3.44□□□□□ -1.86
ZNF558-207ENST00000601372 LCE3DQ9BYE3 92 aa3.41□□□□□ -1.86
ZNF558-207ENST00000601372 KRTAP9-6A8MVA2 160 aa3.37□□□□□ -1.87
ZNF558-207ENST00000601372 LCE1AQ5T7P2 110 aa3.34□□□□□ -1.87
ZNF558-207ENST00000601372 LCE3EQ5T5B0 92 aa3.34□□□□□ -1.88
ZNF558-207ENST00000601372 KMT2DO14686 5537 aa3.33□□□□□ -1.88
ZNF558-207ENST00000601372 KRTAP4-9Q9BYQ8 210 aa3.32□□□□□ -1.88
ZNF558-207ENST00000601372 SYNE2Q8WXH0 6885 aaKnown RBP3.32□□□□□ -1.88
ZNF558-207ENST00000601372 MT3P25713 68 aa3.32□□□□□ -1.88
ZNF558-207ENST00000601372 KRTAP2-2Q9BYT5 123 aa3.31□□□□□ -1.88
ZNF558-207ENST00000601372 KRTAP2-1Q9BYU5 128 aa3.31□□□□□ -1.88
ZNF558-207ENST00000601372 PRM1P04553 51 aa3.24□□□□□ -1.89
ZNF558-207ENST00000601372 LCE5AQ5TCM9 118 aa3.24□□□□□ -1.89
ZNF558-207ENST00000601372 LCE1DQ5T752 114 aa3.23□□□□□ -1.89
ZNF558-207ENST00000601372 LCE4AQ5TA78 99 aa3.21□□□□□ -1.9
ZNF558-207ENST00000601372 MT1AP04731 61 aa3.21□□□□□ -1.9
ZNF558-207ENST00000601372 LCE1BQ5T7P3 118 aa3.21□□□□□ -1.9
ZNF558-207ENST00000601372 USH2AO75445 5202 aa3.13□□□□□ -1.91
ZNF558-207ENST00000601372 KRTAP6-1Q3LI64 71 aa3.12□□□□□ -1.91
ZNF558-207ENST00000601372 KRTAP5-9P26371 169 aa3.08□□□□□ -1.92
ZNF558-207ENST00000601372 KRTAP6-2Q3LI66 62 aa3.08□□□□□ -1.92
ZNF558-207ENST00000601372 MACF1Q9UPN3 7388 aaKnown RBP3.08□□□□□ -1.92
ZNF558-207ENST00000601372 KRTAP9-4Q9BYQ2 154 aa3.05□□□□□ -1.92
ZNF558-207ENST00000601372 SSPOA2VEC9 5147 aa2.95□□□□□ -1.94
ZNF558-207ENST00000601372 FCGBPQ9Y6R7 5405 aaPredicted RBP2.92□□□□□ -1.94
ZNF558-207ENST00000601372 NEBP20929 6669 aa2.9□□□□□ -1.95
ZNF558-207ENST00000601372 KRTAP4-6Q9BYQ5 205 aa2.86□□□□□ -1.95
ZNF558-207ENST00000601372 MUC12Q9UKN1 5478 aa2.8□□□□□ -1.96
ZNF558-207ENST00000601372 DSTQ03001 7570 aaKnown RBP2.8□□□□□ -1.96
ZNF558-207ENST00000601372 KRTAP9-9Q9BYP9 154 aa2.79□□□□□ -1.96
ZNF558-207ENST00000601372 KRTAP20-2Q3LI61 65 aa2.76□□□□□ -1.97
ZNF558-207ENST00000601372 SYNE1Q8NF91 8797 aaKnown RBP2.74□□□□□ -1.97
ZNF558-207ENST00000601372 LCE1CQ5T751 118 aa2.74□□□□□ -1.97
ZNF558-207ENST00000601372 LCE1EQ5T753 118 aa2.74□□□□□ -1.97
ZNF558-207ENST00000601372 LCE1FQ5T754 118 aa2.74□□□□□ -1.97
ZNF558-207ENST00000601372 OBSCNQ5VST9 7968 aa2.65□□□□□ -1.99
ZNF558-207ENST00000601372 KRTAP5-4Q6L8H1 288 aa2.64□□□□□ -1.99
ZNF558-207ENST00000601372 KRTAP5-5Q701N2 237 aaPredicted RBP2.56□□□□□ -2
ZNF558-207ENST00000601372 KRTAP4-11Q9BYQ6 195 aa2.49□□□□□ -2.01
ZNF558-207ENST00000601372 KRTAP4-12Q9BQ66 201 aa2.39□□□□□ -2.03
ZNF558-207ENST00000601372 KRTAP4-2Q9BYR5 136 aa2.39□□□□□ -2.03
ZNF558-207ENST00000601372 KRTAP5-3Q6L8H2 238 aa2.39□□□□□ -2.03
ZNF558-207ENST00000601372 MDN1Q9NU22 5596 aa2.38□□□□□ -2.03
ZNF558-207ENST00000601372 KRTAP4-4Q9BYR3 166 aa2.29□□□□□ -2.04
ZNF558-207ENST00000601372 KRTAP5-8O75690 187 aa2.19□□□□□ -2.06
ZNF558-207ENST00000601372 KRTAP5-2Q701N4 177 aa2.09□□□□□ -2.08
ZNF558-207ENST00000601372 GPR98Q8WXG9 6306 aa2.05□□□□□ -2.08
ZNF558-207ENST00000601372 HMCN1Q96RW7 5635 aa1.97□□□□□ -2.09
ZNF558-207ENST00000601372 MUC5ACP98088 5654 aa1.97□□□□□ -2.09
ZNF558-207ENST00000601372 KRTAP5-10Q6L8G5 202 aa1.94□□□□□ -2.1
ZNF558-207ENST00000601372 MUC5BQ9HC84 5762 aaPredicted RBP1.89□□□□□ -2.11
ZNF558-207ENST00000601372 AHNAK2Q8IVF2 5795 aa1.89□□□□□ -2.11
ZNF558-207ENST00000601372 PHGR1C9JFL3 82 aa1.88□□□□□ -2.11
ZNF558-207ENST00000601372 KRTAP5-1Q6L8H4 278 aa1.87□□□□□ -2.11
ZNF558-207ENST00000601372 KRTAP5-7Q6L8G8 165 aa1.84□□□□□ -2.12
ZNF558-207ENST00000601372 MUC19Q7Z5P9 8384 aa1.76□□□□□ -2.13
ZNF558-207ENST00000601372 KRTAP5-11Q6L8G4 156 aa1.75□□□□□ -2.13
ZNF558-207ENST00000601372 KRTAP21-2Q3LI59 83 aa1.71□□□□□ -2.14
ZNF558-207ENST00000601372 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.55□□□□□ -2.16
ZNF558-207ENST00000601372 AHNAKQ09666 5890 aaKnown RBP1.55□□□□□ -2.16
ZNF558-207ENST00000601372 KRTAP21-1Q3LI58 79 aa1.53□□□□□ -2.16
ZNF558-207ENST00000601372 MUC16Q8WXI7 14507 aa1.09□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 26.1 ms