RNA–Protein interactions for RNA: ENST00000601004.1

CDC42EP3P1-201, Transcript of CDC42 effector protein 3 pseudogene 1, humanhuman

BASIC

Gene CDC42EP3P1, Length 764 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3P1-201ENST00000601004 USH2AO75445 5202 aa2.26□□□□□ -2.05
CDC42EP3P1-201ENST00000601004 FSIP2Q5CZC0 6907 aa2.26□□□□□ -2.05
CDC42EP3P1-201ENST00000601004 KRTAP10-12P60413 245 aa2.23□□□□□ -2.05
CDC42EP3P1-201ENST00000601004 KRTAP6-3Q3LI67 103 aa2.23□□□□□ -2.05
CDC42EP3P1-201ENST00000601004 C10orf95Q9H7T3 257 aa2.23□□□□□ -2.05
CDC42EP3P1-201ENST00000601004 SSPOA2VEC9 5147 aa2.22□□□□□ -2.05
CDC42EP3P1-201ENST00000601004 PP632Q6XCG6 107 aa2.22□□□□□ -2.05
CDC42EP3P1-201ENST00000601004 KRTAP8-1Q8IUC2 63 aa2.22□□□□□ -2.05
CDC42EP3P1-201ENST00000601004 KRTAP10-7P60409 375 aaPredicted RBP2.21□□□□□ -2.06
CDC42EP3P1-201ENST00000601004 LCE1EQ5T753 118 aa2.19□□□□□ -2.06
CDC42EP3P1-201ENST00000601004 KRTAP5-9P26371 169 aa2.18□□□□□ -2.06
CDC42EP3P1-201ENST00000601004 FCGBPQ9Y6R7 5405 aaPredicted RBP2.18□□□□□ -2.06
CDC42EP3P1-201ENST00000601004 SPRR2FQ96RM1 72 aa2.13□□□□□ -2.07
CDC42EP3P1-201ENST00000601004 LCE1FQ5T754 118 aa2.12□□□□□ -2.07
CDC42EP3P1-201ENST00000601004 KRTAP5-11Q6L8G4 156 aa2.09□□□□□ -2.07
CDC42EP3P1-201ENST00000601004 INE1O15225 51 aa2.07□□□□□ -2.08
CDC42EP3P1-201ENST00000601004 SPRR2EP22531 72 aa2.07□□□□□ -2.08
CDC42EP3P1-201ENST00000601004 SPRR2BP35325 72 aa2.07□□□□□ -2.08
CDC42EP3P1-201ENST00000601004 SPRR2AP35326 72 aa2.07□□□□□ -2.08
CDC42EP3P1-201ENST00000601004 MACF1Q9UPN3 7388 aaKnown RBP2.06□□□□□ -2.08
CDC42EP3P1-201ENST00000601004 KRTAP12-3P60328 96 aa2.06□□□□□ -2.08
CDC42EP3P1-201ENST00000601004 LCE3AQ5TA76 89 aa2.06□□□□□ -2.08
CDC42EP3P1-201ENST00000601004 MT1GP13640 62 aa2.05□□□□□ -2.08
CDC42EP3P1-201ENST00000601004 MT1EP04732 61 aa2.03□□□□□ -2.08
CDC42EP3P1-201ENST00000601004 KRTAP19-5Q3LI72 72 aa2.03□□□□□ -2.08
CDC42EP3P1-201ENST00000601004 KRTAP19-7Q3SYF9 63 aa2.03□□□□□ -2.08
CDC42EP3P1-201ENST00000601004 KRTAP19-3Q7Z4W3 81 aa2.03□□□□□ -2.08
CDC42EP3P1-201ENST00000601004 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.02□□□□□ -2.09
CDC42EP3P1-201ENST00000601004 KRTAP2-3P0C7H8 128 aa2.01□□□□□ -2.09
CDC42EP3P1-201ENST00000601004 SPRR2DP22532 72 aa2.01□□□□□ -2.09
CDC42EP3P1-201ENST00000601004 KRTAP2-4Q9BYR9 128 aa2.01□□□□□ -2.09
CDC42EP3P1-201ENST00000601004 KRTAP20-1Q3LI63 56 aa1.99□□□□□ -2.09
CDC42EP3P1-201ENST00000601004 LCE3CQ5T5A8 94 aa1.98□□□□□ -2.09
CDC42EP3P1-201ENST00000601004 SYNE2Q8WXH0 6885 aaKnown RBP1.98□□□□□ -2.09
CDC42EP3P1-201ENST00000601004 MT1LQ93083 61 aa1.97□□□□□ -2.09
CDC42EP3P1-201ENST00000601004 KMT2DO14686 5537 aa1.96□□□□□ -2.1
CDC42EP3P1-201ENST00000601004 KRTAP9-6A8MVA2 160 aa1.95□□□□□ -2.1
CDC42EP3P1-201ENST00000601004 KRTAP2-1Q9BYU5 128 aa1.95□□□□□ -2.1
CDC42EP3P1-201ENST00000601004 MT1MQ8N339 61 aa1.92□□□□□ -2.1
CDC42EP3P1-201ENST00000601004 MUC12Q9UKN1 5478 aa1.91□□□□□ -2.1
CDC42EP3P1-201ENST00000601004 MDN1Q9NU22 5596 aa1.86□□□□□ -2.11
CDC42EP3P1-201ENST00000601004 NEBP20929 6669 aa1.83□□□□□ -2.12
CDC42EP3P1-201ENST00000601004 LCE3EQ5T5B0 92 aa1.8□□□□□ -2.12
CDC42EP3P1-201ENST00000601004 KRTAP12-4P60329 112 aa1.79□□□□□ -2.12
CDC42EP3P1-201ENST00000601004 KRTAP5-4Q6L8H1 288 aa1.77□□□□□ -2.13
CDC42EP3P1-201ENST00000601004 KRTAP5-1Q6L8H4 278 aa1.76□□□□□ -2.13
CDC42EP3P1-201ENST00000601004 SPRR5A0A1B0GTR4 108 aa1.75□□□□□ -2.13
CDC42EP3P1-201ENST00000601004 KRTAP5-5Q701N2 237 aaPredicted RBP1.75□□□□□ -2.13
CDC42EP3P1-201ENST00000601004 KRTAP4-3Q9BYR4 195 aa1.74□□□□□ -2.13
CDC42EP3P1-201ENST00000601004 MT1AP04731 61 aa1.72□□□□□ -2.13
CDC42EP3P1-201ENST00000601004 DSTQ03001 7570 aaKnown RBP1.7□□□□□ -2.14
CDC42EP3P1-201ENST00000601004 MT4P47944 62 aa1.69□□□□□ -2.14
CDC42EP3P1-201ENST00000601004 KRTAP4-4Q9BYR3 166 aa1.65□□□□□ -2.15
CDC42EP3P1-201ENST00000601004 KRTAP20-2Q3LI61 65 aa1.64□□□□□ -2.15
CDC42EP3P1-201ENST00000601004 KRTAP6-1Q3LI64 71 aa1.61□□□□□ -2.15
CDC42EP3P1-201ENST00000601004 KRTAP5-2Q701N4 177 aa1.57□□□□□ -2.16
CDC42EP3P1-201ENST00000601004 KRTAP6-2Q3LI66 62 aa1.54□□□□□ -2.16
CDC42EP3P1-201ENST00000601004 HMCN1Q96RW7 5635 aa1.52□□□□□ -2.17
CDC42EP3P1-201ENST00000601004 GPR98Q8WXG9 6306 aa1.51□□□□□ -2.17
CDC42EP3P1-201ENST00000601004 KRTAP5-10Q6L8G5 202 aa1.51□□□□□ -2.17
CDC42EP3P1-201ENST00000601004 OBSCNQ5VST9 7968 aa1.5□□□□□ -2.17
CDC42EP3P1-201ENST00000601004 LCE3DQ9BYE3 92 aa1.48□□□□□ -2.17
CDC42EP3P1-201ENST00000601004 AHNAK2Q8IVF2 5795 aa1.48□□□□□ -2.17
CDC42EP3P1-201ENST00000601004 KRTAP5-7Q6L8G8 165 aa1.47□□□□□ -2.17
CDC42EP3P1-201ENST00000601004 SYNE1Q8NF91 8797 aaKnown RBP1.46□□□□□ -2.18
CDC42EP3P1-201ENST00000601004 LCE1CQ5T751 118 aa1.46□□□□□ -2.18
CDC42EP3P1-201ENST00000601004 LCE1BQ5T7P3 118 aa1.46□□□□□ -2.18
CDC42EP3P1-201ENST00000601004 KRTAP5-8O75690 187 aa1.39□□□□□ -2.19
CDC42EP3P1-201ENST00000601004 MUC5BQ9HC84 5762 aaPredicted RBP1.23□□□□□ -2.21
CDC42EP3P1-201ENST00000601004 MUC5ACP98088 5654 aa1.2□□□□□ -2.22
CDC42EP3P1-201ENST00000601004 AHNAKQ09666 5890 aaKnown RBP1.2□□□□□ -2.22
CDC42EP3P1-201ENST00000601004 MUC19Q7Z5P9 8384 aa1.09□□□□□ -2.24
CDC42EP3P1-201ENST00000601004 PRM1P04553 51 aa1.07□□□□□ -2.24
CDC42EP3P1-201ENST00000601004 KRTAP21-2Q3LI59 83 aa1.07□□□□□ -2.24
CDC42EP3P1-201ENST00000601004 PHGR1C9JFL3 82 aa1.01□□□□□ -2.25
CDC42EP3P1-201ENST00000601004 KRTAP21-1Q3LI58 79 aa0.76□□□□□ -2.29
CDC42EP3P1-201ENST00000601004 MUC16Q8WXI7 14507 aa0.59□□□□□ -2.32
Retrieved 77 of 20,778 RNA–protein pairs in 85.6 ms