RNA–Protein interactions for RNA: ENST00000600387.5

ARHGEF1-221, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 2,272 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-221ENST00000600387 KRTAP9-6A0A140TA67 174 aa6.11□□□□□ -1.43
ARHGEF1-221ENST00000600387 LOC100996750A0A140TA64 210 aa5.96□□□□□ -1.45
ARHGEF1-221ENST00000600387 SSPOA2VEC9 5147 aa5.95□□□□□ -1.46
ARHGEF1-221ENST00000600387 LCE2DQ5TA82 110 aaPredicted RBP5.92□□□□□ -1.46
ARHGEF1-221ENST00000600387 MT1GP13640 62 aa5.91□□□□□ -1.46
ARHGEF1-221ENST00000600387 KRTAP19-6Q3LI70 58 aa5.9□□□□□ -1.46
ARHGEF1-221ENST00000600387 KRTAP4-3Q9BYR4 195 aa5.9□□□□□ -1.46
ARHGEF1-221ENST00000600387 CRCT1Q9UGL9 99 aa5.9□□□□□ -1.47
ARHGEF1-221ENST00000600387 KRTAP12-4P60329 112 aa5.87□□□□□ -1.47
ARHGEF1-221ENST00000600387 MT1MQ8N339 61 aa5.85□□□□□ -1.47
ARHGEF1-221ENST00000600387 KRTAP19-3Q7Z4W3 81 aa5.81□□□□□ -1.48
ARHGEF1-221ENST00000600387 FCGBPQ9Y6R7 5405 aaPredicted RBP5.6□□□□□ -1.51
ARHGEF1-221ENST00000600387 MUC12Q9UKN1 5478 aa5.57□□□□□ -1.52
ARHGEF1-221ENST00000600387 LCE5AQ5TCM9 118 aa5.56□□□□□ -1.52
ARHGEF1-221ENST00000600387 MT1AP04731 61 aa5.55□□□□□ -1.52
ARHGEF1-221ENST00000600387 LCE3BQ5TA77 95 aa5.55□□□□□ -1.52
ARHGEF1-221ENST00000600387 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.5□□□□□ -1.53
ARHGEF1-221ENST00000600387 KRTAP9-7A8MTY7 169 aa5.49□□□□□ -1.53
ARHGEF1-221ENST00000600387 KRTAP4-9Q9BYQ8 210 aa5.45□□□□□ -1.54
ARHGEF1-221ENST00000600387 SPRR2FQ96RM1 72 aa5.4□□□□□ -1.54
ARHGEF1-221ENST00000600387 LCE3DQ9BYE3 92 aa5.38□□□□□ -1.55
ARHGEF1-221ENST00000600387 SYNE2Q8WXH0 6885 aaKnown RBP5.38□□□□□ -1.55
ARHGEF1-221ENST00000600387 MACF1Q9UPN3 7388 aaKnown RBP5.37□□□□□ -1.55
ARHGEF1-221ENST00000600387 KRTAP6-1Q3LI64 71 aa5.36□□□□□ -1.55
ARHGEF1-221ENST00000600387 LCE3EQ5T5B0 92 aa5.35□□□□□ -1.55
ARHGEF1-221ENST00000600387 DSTQ03001 7570 aaKnown RBP5.34□□□□□ -1.55
ARHGEF1-221ENST00000600387 KRTAP5-5Q701N2 237 aaPredicted RBP5.26□□□□□ -1.57
ARHGEF1-221ENST00000600387 SYNE1Q8NF91 8797 aaKnown RBP5.26□□□□□ -1.57
ARHGEF1-221ENST00000600387 PRM1P04553 51 aa5.23□□□□□ -1.57
ARHGEF1-221ENST00000600387 KRTAP5-9P26371 169 aa5.12□□□□□ -1.59
ARHGEF1-221ENST00000600387 KRTAP6-3Q3LI67 103 aa5.04□□□□□ -1.6
ARHGEF1-221ENST00000600387 KRTAP9-4Q9BYQ2 154 aa4.99□□□□□ -1.61
ARHGEF1-221ENST00000600387 KRTAP6-2Q3LI66 62 aa4.98□□□□□ -1.61
ARHGEF1-221ENST00000600387 LCE1AQ5T7P2 110 aa4.98□□□□□ -1.61
ARHGEF1-221ENST00000600387 NEBP20929 6669 aa4.95□□□□□ -1.62
ARHGEF1-221ENST00000600387 SPRR2EP22531 72 aa4.87□□□□□ -1.63
ARHGEF1-221ENST00000600387 SPRR2BP35325 72 aa4.87□□□□□ -1.63
ARHGEF1-221ENST00000600387 SPRR2AP35326 72 aa4.87□□□□□ -1.63
ARHGEF1-221ENST00000600387 MDN1Q9NU22 5596 aa4.85□□□□□ -1.63
ARHGEF1-221ENST00000600387 KRTAP20-1Q3LI63 56 aa4.78□□□□□ -1.64
ARHGEF1-221ENST00000600387 MT3P25713 68 aa4.77□□□□□ -1.65
ARHGEF1-221ENST00000600387 SPRR2DP22532 72 aa4.7□□□□□ -1.66
ARHGEF1-221ENST00000600387 KRTAP2-2Q9BYT5 123 aa4.66□□□□□ -1.66
ARHGEF1-221ENST00000600387 OBSCNQ5VST9 7968 aa4.43□□□□□ -1.7
ARHGEF1-221ENST00000600387 KRTAP5-4Q6L8H1 288 aa4.36□□□□□ -1.71
ARHGEF1-221ENST00000600387 LCE4AQ5TA78 99 aa4.24□□□□□ -1.73
ARHGEF1-221ENST00000600387 KRTAP5-2Q701N4 177 aa4.13□□□□□ -1.75
ARHGEF1-221ENST00000600387 GPR98Q8WXG9 6306 aa4.12□□□□□ -1.75
ARHGEF1-221ENST00000600387 KRTAP4-6Q9BYQ5 205 aa4.11□□□□□ -1.75
ARHGEF1-221ENST00000600387 KRTAP20-2Q3LI61 65 aa4.06□□□□□ -1.76
ARHGEF1-221ENST00000600387 MT4P47944 62 aa4.03□□□□□ -1.76
ARHGEF1-221ENST00000600387 MUC5ACP98088 5654 aa3.99□□□□□ -1.77
ARHGEF1-221ENST00000600387 LCE1DQ5T752 114 aa3.96□□□□□ -1.78
ARHGEF1-221ENST00000600387 HMCN1Q96RW7 5635 aa3.96□□□□□ -1.78
ARHGEF1-221ENST00000600387 LCE1EQ5T753 118 aa3.91□□□□□ -1.78
ARHGEF1-221ENST00000600387 KRTAP4-11Q9BYQ6 195 aa3.89□□□□□ -1.79
ARHGEF1-221ENST00000600387 KRTAP5-10Q6L8G5 202 aa3.88□□□□□ -1.79
ARHGEF1-221ENST00000600387 KRTAP5-3Q6L8H2 238 aa3.87□□□□□ -1.79
ARHGEF1-221ENST00000600387 AHNAK2Q8IVF2 5795 aa3.84□□□□□ -1.79
ARHGEF1-221ENST00000600387 KRTAP5-1Q6L8H4 278 aa3.81□□□□□ -1.8
ARHGEF1-221ENST00000600387 LCE1BQ5T7P3 118 aa3.75□□□□□ -1.81
ARHGEF1-221ENST00000600387 LCE1CQ5T751 118 aa3.61□□□□□ -1.83
ARHGEF1-221ENST00000600387 KRTAP5-7Q6L8G8 165 aa3.59□□□□□ -1.83
ARHGEF1-221ENST00000600387 KRTAP4-2Q9BYR5 136 aa3.59□□□□□ -1.83
ARHGEF1-221ENST00000600387 KRTAP21-2Q3LI59 83 aa3.45□□□□□ -1.86
ARHGEF1-221ENST00000600387 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.45□□□□□ -1.86
ARHGEF1-221ENST00000600387 KRTAP9-9Q9BYP9 154 aa3.41□□□□□ -1.86
ARHGEF1-221ENST00000600387 KRTAP21-1Q3LI58 79 aa3.36□□□□□ -1.87
ARHGEF1-221ENST00000600387 KRTAP5-8O75690 187 aa3.32□□□□□ -1.88
ARHGEF1-221ENST00000600387 LCE1FQ5T754 118 aa3.22□□□□□ -1.89
ARHGEF1-221ENST00000600387 MUC5BQ9HC84 5762 aaPredicted RBP3.22□□□□□ -1.89
ARHGEF1-221ENST00000600387 AHNAKQ09666 5890 aaKnown RBP3.16□□□□□ -1.9
ARHGEF1-221ENST00000600387 KRTAP4-12Q9BQ66 201 aa3.16□□□□□ -1.9
ARHGEF1-221ENST00000600387 KRTAP4-4Q9BYR3 166 aa3.11□□□□□ -1.91
ARHGEF1-221ENST00000600387 KRTAP5-11Q6L8G4 156 aa3.07□□□□□ -1.92
ARHGEF1-221ENST00000600387 MUC19Q7Z5P9 8384 aa2.98□□□□□ -1.93
ARHGEF1-221ENST00000600387 PHGR1C9JFL3 82 aa2.65□□□□□ -1.99
ARHGEF1-221ENST00000600387 MUC16Q8WXI7 14507 aa1.84□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 102.3 ms