RNA–Protein interactions for RNA: ENST00000599953.1

ZNF544-215, Transcript of zinc finger protein 544, humanhuman

TSL 5 BASIC

Gene ZNF544, Length 2,274 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544-215ENST00000599953 KRTAP2-3P0C7H8 128 aa3.67□□□□□ -1.82
ZNF544-215ENST00000599953 KRTAP2-4Q9BYR9 128 aa3.67□□□□□ -1.82
ZNF544-215ENST00000599953 KRTAP2-1Q9BYU5 128 aa3.67□□□□□ -1.82
ZNF544-215ENST00000599953 KRTAP9-2Q9BYQ4 174 aa3.61□□□□□ -1.83
ZNF544-215ENST00000599953 FCGBPQ9Y6R7 5405 aaPredicted RBP3.54□□□□□ -1.84
ZNF544-215ENST00000599953 MT1GP13640 62 aa3.54□□□□□ -1.84
ZNF544-215ENST00000599953 KRTAP19-3Q7Z4W3 81 aa3.54□□□□□ -1.84
ZNF544-215ENST00000599953 MT1MQ8N339 61 aa3.51□□□□□ -1.85
ZNF544-215ENST00000599953 CRCT1Q9UGL9 99 aa3.47□□□□□ -1.85
ZNF544-215ENST00000599953 KRTAP4-3Q9BYR4 195 aa3.47□□□□□ -1.85
ZNF544-215ENST00000599953 KRTAP5-3Q6L8H2 238 aa3.42□□□□□ -1.86
ZNF544-215ENST00000599953 LCE5AQ5TCM9 118 aa3.4□□□□□ -1.86
ZNF544-215ENST00000599953 SPRR2FQ96RM1 72 aa3.4□□□□□ -1.86
ZNF544-215ENST00000599953 MACF1Q9UPN3 7388 aaKnown RBP3.4□□□□□ -1.87
ZNF544-215ENST00000599953 SYNE2Q8WXH0 6885 aaKnown RBP3.33□□□□□ -1.88
ZNF544-215ENST00000599953 KRTAP9-6A0A140TA67 174 aa3.33□□□□□ -1.88
ZNF544-215ENST00000599953 MUC12Q9UKN1 5478 aa3.33□□□□□ -1.88
ZNF544-215ENST00000599953 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.23□□□□□ -1.89
ZNF544-215ENST00000599953 KRTAP12-4P60329 112 aa3.22□□□□□ -1.89
ZNF544-215ENST00000599953 LCE3BQ5TA77 95 aa3.21□□□□□ -1.9
ZNF544-215ENST00000599953 MDN1Q9NU22 5596 aa3.19□□□□□ -1.9
ZNF544-215ENST00000599953 KRTAP5-9P26371 169 aa3.19□□□□□ -1.9
ZNF544-215ENST00000599953 MT1AP04731 61 aa3.18□□□□□ -1.9
ZNF544-215ENST00000599953 LCE1AQ5T7P2 110 aa3.17□□□□□ -1.9
ZNF544-215ENST00000599953 KRTAP6-1Q3LI64 71 aa3.16□□□□□ -1.9
ZNF544-215ENST00000599953 DSTQ03001 7570 aaKnown RBP3.12□□□□□ -1.91
ZNF544-215ENST00000599953 SPRR2EP22531 72 aa3.12□□□□□ -1.91
ZNF544-215ENST00000599953 SPRR2BP35325 72 aa3.12□□□□□ -1.91
ZNF544-215ENST00000599953 SPRR2AP35326 72 aa3.12□□□□□ -1.91
ZNF544-215ENST00000599953 KRTAP5-5Q701N2 237 aaPredicted RBP3.1□□□□□ -1.91
ZNF544-215ENST00000599953 KRTAP6-3Q3LI67 103 aa3.1□□□□□ -1.91
ZNF544-215ENST00000599953 KRTAP4-9Q9BYQ8 210 aa3.08□□□□□ -1.92
ZNF544-215ENST00000599953 KRTAP9-9Q9BYP9 154 aa3.06□□□□□ -1.92
ZNF544-215ENST00000599953 KRTAP9-4Q9BYQ2 154 aa3.06□□□□□ -1.92
ZNF544-215ENST00000599953 KRTAP9-7A8MTY7 169 aa3.05□□□□□ -1.92
ZNF544-215ENST00000599953 LCE3DQ9BYE3 92 aa3.05□□□□□ -1.92
ZNF544-215ENST00000599953 KRTAP4-2Q9BYR5 136 aa3.05□□□□□ -1.92
ZNF544-215ENST00000599953 LCE3EQ5T5B0 92 aa3.03□□□□□ -1.92
ZNF544-215ENST00000599953 KRTAP4-12Q9BQ66 201 aa3.02□□□□□ -1.93
ZNF544-215ENST00000599953 SPRR2DP22532 72 aa2.99□□□□□ -1.93
ZNF544-215ENST00000599953 LCE4AQ5TA78 99 aa2.97□□□□□ -1.93
ZNF544-215ENST00000599953 LCE1DQ5T752 114 aa2.96□□□□□ -1.93
ZNF544-215ENST00000599953 NEBP20929 6669 aa2.95□□□□□ -1.94
ZNF544-215ENST00000599953 SYNE1Q8NF91 8797 aaKnown RBP2.95□□□□□ -1.94
ZNF544-215ENST00000599953 MT3P25713 68 aa2.88□□□□□ -1.95
ZNF544-215ENST00000599953 PRM1P04553 51 aa2.84□□□□□ -1.95
ZNF544-215ENST00000599953 KRTAP6-2Q3LI66 62 aa2.84□□□□□ -1.96
ZNF544-215ENST00000599953 KRTAP5-4Q6L8H1 288 aa2.75□□□□□ -1.97
ZNF544-215ENST00000599953 KRTAP4-11Q9BYQ6 195 aa2.74□□□□□ -1.97
ZNF544-215ENST00000599953 KRTAP20-1Q3LI63 56 aa2.7□□□□□ -1.98
ZNF544-215ENST00000599953 KRTAP2-2Q9BYT5 123 aa2.67□□□□□ -1.98
ZNF544-215ENST00000599953 MT4P47944 62 aa2.6□□□□□ -1.99
ZNF544-215ENST00000599953 KRTAP20-2Q3LI61 65 aa2.58□□□□□ -2
ZNF544-215ENST00000599953 KRTAP5-2Q701N4 177 aa2.57□□□□□ -2
ZNF544-215ENST00000599953 OBSCNQ5VST9 7968 aa2.54□□□□□ -2
ZNF544-215ENST00000599953 HMCN1Q96RW7 5635 aa2.54□□□□□ -2
ZNF544-215ENST00000599953 LCE1FQ5T754 118 aa2.47□□□□□ -2.01
ZNF544-215ENST00000599953 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.39□□□□□ -2.03
ZNF544-215ENST00000599953 GPR98Q8WXG9 6306 aa2.38□□□□□ -2.03
ZNF544-215ENST00000599953 LCE1EQ5T753 118 aa2.37□□□□□ -2.03
ZNF544-215ENST00000599953 MUC5ACP98088 5654 aa2.29□□□□□ -2.04
ZNF544-215ENST00000599953 LCE1BQ5T7P3 118 aa2.28□□□□□ -2.05
ZNF544-215ENST00000599953 AHNAK2Q8IVF2 5795 aa2.25□□□□□ -2.05
ZNF544-215ENST00000599953 LCE1CQ5T751 118 aa2.22□□□□□ -2.05
ZNF544-215ENST00000599953 KRTAP5-10Q6L8G5 202 aa2.22□□□□□ -2.05
ZNF544-215ENST00000599953 KRTAP5-1Q6L8H4 278 aa2.21□□□□□ -2.06
ZNF544-215ENST00000599953 KRTAP5-7Q6L8G8 165 aa2.07□□□□□ -2.08
ZNF544-215ENST00000599953 KRTAP5-8O75690 187 aa2.06□□□□□ -2.08
ZNF544-215ENST00000599953 KRTAP21-2Q3LI59 83 aa2.04□□□□□ -2.08
ZNF544-215ENST00000599953 MUC5BQ9HC84 5762 aaPredicted RBP1.92□□□□□ -2.1
ZNF544-215ENST00000599953 KRTAP5-11Q6L8G4 156 aa1.92□□□□□ -2.1
ZNF544-215ENST00000599953 AHNAKQ09666 5890 aaKnown RBP1.9□□□□□ -2.11
ZNF544-215ENST00000599953 KRTAP4-4Q9BYR3 166 aa1.89□□□□□ -2.11
ZNF544-215ENST00000599953 KRTAP21-1Q3LI58 79 aa1.79□□□□□ -2.12
ZNF544-215ENST00000599953 MUC19Q7Z5P9 8384 aa1.64□□□□□ -2.15
ZNF544-215ENST00000599953 PHGR1C9JFL3 82 aa1.64□□□□□ -2.15
ZNF544-215ENST00000599953 MUC16Q8WXI7 14507 aa1.08□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 78.5 ms