RNA–Protein interactions for RNA: ENST00000599589.5

ARHGEF1-218, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-218ENST00000599589 MT1EP04732 61 aa6.46□□□□□ -1.38
ARHGEF1-218ENST00000599589 KRTAP19-4Q3LI73 84 aa6.45□□□□□ -1.38
ARHGEF1-218ENST00000599589 FCGBPQ9Y6R7 5405 aaPredicted RBP6.29□□□□□ -1.4
ARHGEF1-218ENST00000599589 LOC100996750A0A140TA64 210 aa6.28□□□□□ -1.4
ARHGEF1-218ENST00000599589 KRTAP4-3Q9BYR4 195 aa6.21□□□□□ -1.42
ARHGEF1-218ENST00000599589 MT1GP13640 62 aa6.16□□□□□ -1.42
ARHGEF1-218ENST00000599589 KRTAP12-4P60329 112 aa6.16□□□□□ -1.42
ARHGEF1-218ENST00000599589 KRTAP19-3Q7Z4W3 81 aa6.12□□□□□ -1.43
ARHGEF1-218ENST00000599589 CRCT1Q9UGL9 99 aa6.08□□□□□ -1.44
ARHGEF1-218ENST00000599589 MT1MQ8N339 61 aa6.05□□□□□ -1.44
ARHGEF1-218ENST00000599589 KRTAP9-2Q9BYQ4 174 aa6.05□□□□□ -1.44
ARHGEF1-218ENST00000599589 MUC12Q9UKN1 5478 aa6.03□□□□□ -1.44
ARHGEF1-218ENST00000599589 SPRR2FQ96RM1 72 aa6.03□□□□□ -1.44
ARHGEF1-218ENST00000599589 MACF1Q9UPN3 7388 aaKnown RBP5.98□□□□□ -1.45
ARHGEF1-218ENST00000599589 LCE5AQ5TCM9 118 aa5.95□□□□□ -1.46
ARHGEF1-218ENST00000599589 LCE3BQ5TA77 95 aa5.82□□□□□ -1.48
ARHGEF1-218ENST00000599589 KRTAP4-9Q9BYQ8 210 aa5.8□□□□□ -1.48
ARHGEF1-218ENST00000599589 SYNE2Q8WXH0 6885 aaKnown RBP5.77□□□□□ -1.49
ARHGEF1-218ENST00000599589 KRTAP5-9P26371 169 aa5.77□□□□□ -1.49
ARHGEF1-218ENST00000599589 DSTQ03001 7570 aaKnown RBP5.73□□□□□ -1.49
ARHGEF1-218ENST00000599589 LCE1AQ5T7P2 110 aa5.69□□□□□ -1.5
ARHGEF1-218ENST00000599589 MT1AP04731 61 aa5.63□□□□□ -1.51
ARHGEF1-218ENST00000599589 SYNE1Q8NF91 8797 aaKnown RBP5.62□□□□□ -1.51
ARHGEF1-218ENST00000599589 MDN1Q9NU22 5596 aa5.62□□□□□ -1.51
ARHGEF1-218ENST00000599589 SPRR2EP22531 72 aa5.59□□□□□ -1.52
ARHGEF1-218ENST00000599589 SPRR2BP35325 72 aa5.59□□□□□ -1.52
ARHGEF1-218ENST00000599589 SPRR2AP35326 72 aa5.59□□□□□ -1.52
ARHGEF1-218ENST00000599589 KRTAP9-7A8MTY7 169 aa5.56□□□□□ -1.52
ARHGEF1-218ENST00000599589 LCE3DQ9BYE3 92 aa5.56□□□□□ -1.52
ARHGEF1-218ENST00000599589 KRTAP6-1Q3LI64 71 aa5.56□□□□□ -1.52
ARHGEF1-218ENST00000599589 LCE3EQ5T5B0 92 aa5.52□□□□□ -1.53
ARHGEF1-218ENST00000599589 PRM1P04553 51 aa5.52□□□□□ -1.53
ARHGEF1-218ENST00000599589 KRTAP5-5Q701N2 237 aaPredicted RBP5.52□□□□□ -1.53
ARHGEF1-218ENST00000599589 KRTAP6-3Q3LI67 103 aa5.45□□□□□ -1.54
ARHGEF1-218ENST00000599589 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.44□□□□□ -1.54
ARHGEF1-218ENST00000599589 SPRR2DP22532 72 aa5.37□□□□□ -1.55
ARHGEF1-218ENST00000599589 KRTAP9-6A0A140TA67 174 aa5.36□□□□□ -1.55
ARHGEF1-218ENST00000599589 KRTAP6-2Q3LI66 62 aa5.22□□□□□ -1.57
ARHGEF1-218ENST00000599589 KRTAP9-4Q9BYQ2 154 aa5.12□□□□□ -1.59
ARHGEF1-218ENST00000599589 NEBP20929 6669 aa5.03□□□□□ -1.6
ARHGEF1-218ENST00000599589 KRTAP5-4Q6L8H1 288 aa4.93□□□□□ -1.62
ARHGEF1-218ENST00000599589 OBSCNQ5VST9 7968 aa4.92□□□□□ -1.62
ARHGEF1-218ENST00000599589 MT3P25713 68 aa4.9□□□□□ -1.63
ARHGEF1-218ENST00000599589 KRTAP2-2Q9BYT5 123 aa4.89□□□□□ -1.63
ARHGEF1-218ENST00000599589 LCE4AQ5TA78 99 aa4.73□□□□□ -1.65
ARHGEF1-218ENST00000599589 KRTAP4-6Q9BYQ5 205 aa4.7□□□□□ -1.66
ARHGEF1-218ENST00000599589 MT4P47944 62 aa4.68□□□□□ -1.66
ARHGEF1-218ENST00000599589 KRTAP20-2Q3LI61 65 aa4.6□□□□□ -1.67
ARHGEF1-218ENST00000599589 KRTAP5-2Q701N4 177 aa4.54□□□□□ -1.68
ARHGEF1-218ENST00000599589 LCE1DQ5T752 114 aa4.49□□□□□ -1.69
ARHGEF1-218ENST00000599589 KRTAP20-1Q3LI63 56 aa4.47□□□□□ -1.69
ARHGEF1-218ENST00000599589 HMCN1Q96RW7 5635 aa4.45□□□□□ -1.7
ARHGEF1-218ENST00000599589 KRTAP5-3Q6L8H2 238 aa4.41□□□□□ -1.7
ARHGEF1-218ENST00000599589 LCE1EQ5T753 118 aa4.34□□□□□ -1.72
ARHGEF1-218ENST00000599589 MUC5ACP98088 5654 aa4.2□□□□□ -1.74
ARHGEF1-218ENST00000599589 KRTAP4-11Q9BYQ6 195 aa4.15□□□□□ -1.75
ARHGEF1-218ENST00000599589 KRTAP5-10Q6L8G5 202 aa4.01□□□□□ -1.77
ARHGEF1-218ENST00000599589 LCE1BQ5T7P3 118 aa3.94□□□□□ -1.78
ARHGEF1-218ENST00000599589 KRTAP5-1Q6L8H4 278 aa3.88□□□□□ -1.79
ARHGEF1-218ENST00000599589 LCE1CQ5T751 118 aa3.86□□□□□ -1.79
ARHGEF1-218ENST00000599589 KRTAP4-2Q9BYR5 136 aa3.84□□□□□ -1.79
ARHGEF1-218ENST00000599589 KRTAP5-8O75690 187 aa3.73□□□□□ -1.81
ARHGEF1-218ENST00000599589 AHNAK2Q8IVF2 5795 aa3.69□□□□□ -1.82
ARHGEF1-218ENST00000599589 KRTAP5-7Q6L8G8 165 aa3.67□□□□□ -1.82
ARHGEF1-218ENST00000599589 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.63□□□□□ -1.83
ARHGEF1-218ENST00000599589 KRTAP21-2Q3LI59 83 aa3.55□□□□□ -1.84
ARHGEF1-218ENST00000599589 KRTAP21-1Q3LI58 79 aa3.48□□□□□ -1.85
ARHGEF1-218ENST00000599589 LCE1FQ5T754 118 aa3.47□□□□□ -1.85
ARHGEF1-218ENST00000599589 KRTAP5-11Q6L8G4 156 aa3.35□□□□□ -1.87
ARHGEF1-218ENST00000599589 KRTAP4-4Q9BYR3 166 aa3.34□□□□□ -1.88
ARHGEF1-218ENST00000599589 MUC19Q7Z5P9 8384 aa3.32□□□□□ -1.88
ARHGEF1-218ENST00000599589 KRTAP9-9Q9BYP9 154 aa3.25□□□□□ -1.89
ARHGEF1-218ENST00000599589 MUC5BQ9HC84 5762 aaPredicted RBP3.19□□□□□ -1.9
ARHGEF1-218ENST00000599589 GPR98Q8WXG9 6306 aa3.18□□□□□ -1.9
ARHGEF1-218ENST00000599589 KRTAP4-12Q9BQ66 201 aa3.12□□□□□ -1.91
ARHGEF1-218ENST00000599589 PHGR1C9JFL3 82 aa2.88□□□□□ -1.95
ARHGEF1-218ENST00000599589 AHNAKQ09666 5890 aaKnown RBP2.58□□□□□ -2
ARHGEF1-218ENST00000599589 MUC16Q8WXI7 14507 aa1.91□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 103.2 ms