RNA–Protein interactions for RNA: ENST00000598895.5

ZNF548-209, Transcript of zinc finger protein 548, humanhuman

TSL 4 BASIC

Gene ZNF548, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-209ENST00000598895 SPRR2AP35326 72 aa4.74□□□□□ -1.65
ZNF548-209ENST00000598895 MDN1Q9NU22 5596 aa4.72□□□□□ -1.65
ZNF548-209ENST00000598895 A0A0A0MQY5 61 aa4.7□□□□□ -1.66
ZNF548-209ENST00000598895 SPRR5A0A1B0GTR4 108 aa4.7□□□□□ -1.66
ZNF548-209ENST00000598895 KRTAP20-1Q3LI63 56 aa4.7□□□□□ -1.66
ZNF548-209ENST00000598895 LCE1AQ5T7P2 110 aa4.67□□□□□ -1.66
ZNF548-209ENST00000598895 KRTAP2-3P0C7H8 128 aa4.58□□□□□ -1.68
ZNF548-209ENST00000598895 SPRR2DP22532 72 aa4.58□□□□□ -1.68
ZNF548-209ENST00000598895 KRTAP2-4Q9BYR9 128 aa4.58□□□□□ -1.68
ZNF548-209ENST00000598895 LCE3AQ5TA76 89 aa4.54□□□□□ -1.68
ZNF548-209ENST00000598895 KRTAP19-7Q3SYF9 63 aa4.51□□□□□ -1.69
ZNF548-209ENST00000598895 MT1EP04732 61 aa4.47□□□□□ -1.69
ZNF548-209ENST00000598895 KRTAP19-5Q3LI72 72 aa4.46□□□□□ -1.7
ZNF548-209ENST00000598895 LCE3BQ5TA77 95 aa4.44□□□□□ -1.7
ZNF548-209ENST00000598895 KRTAP2-2Q9BYT5 123 aa4.44□□□□□ -1.7
ZNF548-209ENST00000598895 KRTAP2-1Q9BYU5 128 aa4.44□□□□□ -1.7
ZNF548-209ENST00000598895 KRTAP19-3Q7Z4W3 81 aa4.4□□□□□ -1.71
ZNF548-209ENST00000598895 LCE5AQ5TCM9 118 aa4.39□□□□□ -1.71
ZNF548-209ENST00000598895 KRTAP12-3P60328 96 aa4.37□□□□□ -1.71
ZNF548-209ENST00000598895 MT1GP13640 62 aa4.3□□□□□ -1.72
ZNF548-209ENST00000598895 MT1LQ93083 61 aa4.3□□□□□ -1.72
ZNF548-209ENST00000598895 INE1O15225 51 aa4.29□□□□□ -1.72
ZNF548-209ENST00000598895 MT1MQ8N339 61 aa4.26□□□□□ -1.73
ZNF548-209ENST00000598895 DSTQ03001 7570 aaKnown RBP4.24□□□□□ -1.73
ZNF548-209ENST00000598895 KRTAP4-3Q9BYR4 195 aa4.21□□□□□ -1.74
ZNF548-209ENST00000598895 KRTAP4-7Q9BYR0 210 aa4.15□□□□□ -1.75
ZNF548-209ENST00000598895 KRTAP19-4Q3LI73 84 aa4.14□□□□□ -1.75
ZNF548-209ENST00000598895 KRTAP4-9Q9BYQ8 210 aa4.13□□□□□ -1.75
ZNF548-209ENST00000598895 LCE3CQ5T5A8 94 aa4.12□□□□□ -1.75
ZNF548-209ENST00000598895 MT4P47944 62 aa4.03□□□□□ -1.76
ZNF548-209ENST00000598895 LCE1DQ5T752 114 aa4.02□□□□□ -1.77
ZNF548-209ENST00000598895 LCE4AQ5TA78 99 aa4.01□□□□□ -1.77
ZNF548-209ENST00000598895 KRTAP5-4Q6L8H1 288 aa3.95□□□□□ -1.78
ZNF548-209ENST00000598895 LOC100996750A0A140TA64 210 aa3.92□□□□□ -1.78
ZNF548-209ENST00000598895 KRTAP4-6Q9BYQ5 205 aa3.91□□□□□ -1.78
ZNF548-209ENST00000598895 HMCN1Q96RW7 5635 aa3.88□□□□□ -1.79
ZNF548-209ENST00000598895 KRTAP5-5Q701N2 237 aaPredicted RBP3.86□□□□□ -1.79
ZNF548-209ENST00000598895 KRTAP9-6A8MVA2 160 aa3.84□□□□□ -1.79
ZNF548-209ENST00000598895 GPR98Q8WXG9 6306 aa3.81□□□□□ -1.8
ZNF548-209ENST00000598895 KRTAP20-2Q3LI61 65 aa3.75□□□□□ -1.81
ZNF548-209ENST00000598895 KRTAP12-4P60329 112 aa3.74□□□□□ -1.81
ZNF548-209ENST00000598895 AHNAK2Q8IVF2 5795 aa3.72□□□□□ -1.81
ZNF548-209ENST00000598895 SYNE1Q8NF91 8797 aaKnown RBP3.68□□□□□ -1.82
ZNF548-209ENST00000598895 MT1AP04731 61 aa3.65□□□□□ -1.83
ZNF548-209ENST00000598895 KRTAP6-1Q3LI64 71 aa3.64□□□□□ -1.83
ZNF548-209ENST00000598895 KRTAP5-10Q6L8G5 202 aa3.64□□□□□ -1.83
ZNF548-209ENST00000598895 KRTAP5-3Q6L8H2 238 aa3.62□□□□□ -1.83
ZNF548-209ENST00000598895 KRTAP9-4Q9BYQ2 154 aa3.51□□□□□ -1.85
ZNF548-209ENST00000598895 KRTAP5-2Q701N4 177 aa3.48□□□□□ -1.85
ZNF548-209ENST00000598895 KRTAP5-7Q6L8G8 165 aa3.47□□□□□ -1.85
ZNF548-209ENST00000598895 KRTAP6-2Q3LI66 62 aa3.46□□□□□ -1.86
ZNF548-209ENST00000598895 KRTAP4-11Q9BYQ6 195 aa3.38□□□□□ -1.87
ZNF548-209ENST00000598895 MT3P25713 68 aa3.32□□□□□ -1.88
ZNF548-209ENST00000598895 KRTAP5-8O75690 187 aa3.28□□□□□ -1.88
ZNF548-209ENST00000598895 OBSCNQ5VST9 7968 aa3.23□□□□□ -1.89
ZNF548-209ENST00000598895 LCE3DQ9BYE3 92 aa3.19□□□□□ -1.9
ZNF548-209ENST00000598895 LCE3EQ5T5B0 92 aa3.18□□□□□ -1.9
ZNF548-209ENST00000598895 KRTAP5-1Q6L8H4 278 aa3.11□□□□□ -1.91
ZNF548-209ENST00000598895 KRTAP9-9Q9BYP9 154 aa3.08□□□□□ -1.92
ZNF548-209ENST00000598895 MUC5ACP98088 5654 aa3.03□□□□□ -1.92
ZNF548-209ENST00000598895 AHNAKQ09666 5890 aaKnown RBP3.01□□□□□ -1.93
ZNF548-209ENST00000598895 MUC5BQ9HC84 5762 aaPredicted RBP2.99□□□□□ -1.93
ZNF548-209ENST00000598895 PRM1P04553 51 aa2.99□□□□□ -1.93
ZNF548-209ENST00000598895 LCE1EQ5T753 118 aa2.99□□□□□ -1.93
ZNF548-209ENST00000598895 LCE1BQ5T7P3 118 aa2.9□□□□□ -1.95
ZNF548-209ENST00000598895 KRTAP4-2Q9BYR5 136 aa2.85□□□□□ -1.95
ZNF548-209ENST00000598895 LCE1CQ5T751 118 aa2.78□□□□□ -1.96
ZNF548-209ENST00000598895 KRTAP4-12Q9BQ66 201 aa2.6□□□□□ -1.99
ZNF548-209ENST00000598895 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.53□□□□□ -2
ZNF548-209ENST00000598895 KRTAP5-11Q6L8G4 156 aa2.51□□□□□ -2.01
ZNF548-209ENST00000598895 LCE1FQ5T754 118 aa2.39□□□□□ -2.03
ZNF548-209ENST00000598895 KRTAP21-2Q3LI59 83 aa2.38□□□□□ -2.03
ZNF548-209ENST00000598895 KRTAP4-4Q9BYR3 166 aa2.23□□□□□ -2.05
ZNF548-209ENST00000598895 PHGR1C9JFL3 82 aa2.17□□□□□ -2.06
ZNF548-209ENST00000598895 MUC19Q7Z5P9 8384 aa1.97□□□□□ -2.09
ZNF548-209ENST00000598895 KRTAP21-1Q3LI58 79 aa1.93□□□□□ -2.1
ZNF548-209ENST00000598895 MUC16Q8WXI7 14507 aa1.39□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 10.9 ms