RNA–Protein interactions for RNA: ENST00000598118.1

GRAMD1A-207, Transcript of GRAM domain containing 1A, humanhuman

TSL 1 (best)

Gene GRAMD1A, Length 2,277 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-207ENST00000598118 INE1O15225 51 aa6.77□□□□□ -1.33
GRAMD1A-207ENST00000598118 KRTAP19-4Q3LI73 84 aa6.7□□□□□ -1.34
GRAMD1A-207ENST00000598118 FCGBPQ9Y6R7 5405 aaPredicted RBP6.63□□□□□ -1.35
GRAMD1A-207ENST00000598118 KRTAP2-3P0C7H8 128 aa6.61□□□□□ -1.35
GRAMD1A-207ENST00000598118 KRTAP2-4Q9BYR9 128 aa6.61□□□□□ -1.35
GRAMD1A-207ENST00000598118 KRTAP2-1Q9BYU5 128 aa6.61□□□□□ -1.35
GRAMD1A-207ENST00000598118 MUC12Q9UKN1 5478 aa6.54□□□□□ -1.36
GRAMD1A-207ENST00000598118 KRTAP4-3Q9BYR4 195 aa6.52□□□□□ -1.37
GRAMD1A-207ENST00000598118 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.46□□□□□ -1.37
GRAMD1A-207ENST00000598118 LOC100996750A0A140TA64 210 aa6.46□□□□□ -1.38
GRAMD1A-207ENST00000598118 KRTAP19-3Q7Z4W3 81 aa6.42□□□□□ -1.38
GRAMD1A-207ENST00000598118 MT1MQ8N339 61 aa6.41□□□□□ -1.38
GRAMD1A-207ENST00000598118 MT1GP13640 62 aa6.38□□□□□ -1.39
GRAMD1A-207ENST00000598118 KRTAP9-7A8MTY7 169 aa6.38□□□□□ -1.39
GRAMD1A-207ENST00000598118 SPRR2FQ96RM1 72 aa6.23□□□□□ -1.41
GRAMD1A-207ENST00000598118 LCE5AQ5TCM9 118 aa6.23□□□□□ -1.41
GRAMD1A-207ENST00000598118 MACF1Q9UPN3 7388 aaKnown RBP6.21□□□□□ -1.42
GRAMD1A-207ENST00000598118 DSTQ03001 7570 aaKnown RBP6.19□□□□□ -1.42
GRAMD1A-207ENST00000598118 SYNE2Q8WXH0 6885 aaKnown RBP6.16□□□□□ -1.42
GRAMD1A-207ENST00000598118 KRTAP6-3Q3LI67 103 aa6.03□□□□□ -1.44
GRAMD1A-207ENST00000598118 MDN1Q9NU22 5596 aa5.97□□□□□ -1.45
GRAMD1A-207ENST00000598118 LCE3BQ5TA77 95 aa5.86□□□□□ -1.47
GRAMD1A-207ENST00000598118 LCE1AQ5T7P2 110 aa5.85□□□□□ -1.47
GRAMD1A-207ENST00000598118 KRTAP5-9P26371 169 aa5.83□□□□□ -1.48
GRAMD1A-207ENST00000598118 KRTAP6-1Q3LI64 71 aa5.81□□□□□ -1.48
GRAMD1A-207ENST00000598118 NEBP20929 6669 aa5.81□□□□□ -1.48
GRAMD1A-207ENST00000598118 KRTAP12-4P60329 112 aa5.81□□□□□ -1.48
GRAMD1A-207ENST00000598118 KRTAP4-9Q9BYQ8 210 aa5.76□□□□□ -1.49
GRAMD1A-207ENST00000598118 MT1AP04731 61 aa5.73□□□□□ -1.49
GRAMD1A-207ENST00000598118 SYNE1Q8NF91 8797 aaKnown RBP5.7□□□□□ -1.5
GRAMD1A-207ENST00000598118 KRTAP5-5Q701N2 237 aaPredicted RBP5.69□□□□□ -1.5
GRAMD1A-207ENST00000598118 SPRR2EP22531 72 aa5.69□□□□□ -1.5
GRAMD1A-207ENST00000598118 SPRR2BP35325 72 aa5.69□□□□□ -1.5
GRAMD1A-207ENST00000598118 SPRR2AP35326 72 aa5.69□□□□□ -1.5
GRAMD1A-207ENST00000598118 KRTAP20-1Q3LI63 56 aa5.58□□□□□ -1.52
GRAMD1A-207ENST00000598118 LCE3DQ9BYE3 92 aa5.48□□□□□ -1.53
GRAMD1A-207ENST00000598118 SPRR2DP22532 72 aa5.44□□□□□ -1.54
GRAMD1A-207ENST00000598118 KRTAP9-4Q9BYQ2 154 aa5.4□□□□□ -1.54
GRAMD1A-207ENST00000598118 LCE3EQ5T5B0 92 aa5.39□□□□□ -1.55
GRAMD1A-207ENST00000598118 KRTAP4-6Q9BYQ5 205 aa5.31□□□□□ -1.56
GRAMD1A-207ENST00000598118 KRTAP2-2Q9BYT5 123 aa5.26□□□□□ -1.57
GRAMD1A-207ENST00000598118 KRTAP6-2Q3LI66 62 aa5.22□□□□□ -1.57
GRAMD1A-207ENST00000598118 MT3P25713 68 aa5.13□□□□□ -1.59
GRAMD1A-207ENST00000598118 PRM1P04553 51 aa5.12□□□□□ -1.59
GRAMD1A-207ENST00000598118 OBSCNQ5VST9 7968 aa5.12□□□□□ -1.59
GRAMD1A-207ENST00000598118 KRTAP5-4Q6L8H1 288 aa5.04□□□□□ -1.6
GRAMD1A-207ENST00000598118 MT4P47944 62 aa4.82□□□□□ -1.64
GRAMD1A-207ENST00000598118 KRTAP20-2Q3LI61 65 aa4.74□□□□□ -1.65
GRAMD1A-207ENST00000598118 LCE4AQ5TA78 99 aa4.72□□□□□ -1.65
GRAMD1A-207ENST00000598118 LCE1DQ5T752 114 aa4.71□□□□□ -1.66
GRAMD1A-207ENST00000598118 KRTAP5-2Q701N4 177 aa4.7□□□□□ -1.66
GRAMD1A-207ENST00000598118 GPR98Q8WXG9 6306 aa4.69□□□□□ -1.66
GRAMD1A-207ENST00000598118 HMCN1Q96RW7 5635 aa4.63□□□□□ -1.67
GRAMD1A-207ENST00000598118 KRTAP5-3Q6L8H2 238 aa4.53□□□□□ -1.68
GRAMD1A-207ENST00000598118 AHNAK2Q8IVF2 5795 aa4.49□□□□□ -1.69
GRAMD1A-207ENST00000598118 KRTAP5-10Q6L8G5 202 aa4.39□□□□□ -1.71
GRAMD1A-207ENST00000598118 MUC5ACP98088 5654 aa4.38□□□□□ -1.71
GRAMD1A-207ENST00000598118 KRTAP9-9Q9BYP9 154 aa4.29□□□□□ -1.72
GRAMD1A-207ENST00000598118 LCE1EQ5T753 118 aa4.22□□□□□ -1.73
GRAMD1A-207ENST00000598118 KRTAP5-7Q6L8G8 165 aa4.21□□□□□ -1.74
GRAMD1A-207ENST00000598118 LCE1BQ5T7P3 118 aa4.17□□□□□ -1.74
GRAMD1A-207ENST00000598118 KRTAP4-12Q9BQ66 201 aa4.14□□□□□ -1.75
GRAMD1A-207ENST00000598118 KRTAP4-2Q9BYR5 136 aa4.09□□□□□ -1.76
GRAMD1A-207ENST00000598118 KRTAP5-1Q6L8H4 278 aa4.02□□□□□ -1.77
GRAMD1A-207ENST00000598118 LCE1CQ5T751 118 aa4□□□□□ -1.77
GRAMD1A-207ENST00000598118 KRTAP4-11Q9BYQ6 195 aa3.97□□□□□ -1.77
GRAMD1A-207ENST00000598118 KRTAP5-8O75690 187 aa3.86□□□□□ -1.79
GRAMD1A-207ENST00000598118 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.77□□□□□ -1.81
GRAMD1A-207ENST00000598118 KRTAP21-2Q3LI59 83 aa3.77□□□□□ -1.81
GRAMD1A-207ENST00000598118 MUC5BQ9HC84 5762 aaPredicted RBP3.69□□□□□ -1.82
GRAMD1A-207ENST00000598118 AHNAKQ09666 5890 aaKnown RBP3.68□□□□□ -1.82
GRAMD1A-207ENST00000598118 KRTAP4-4Q9BYR3 166 aa3.45□□□□□ -1.86
GRAMD1A-207ENST00000598118 KRTAP5-11Q6L8G4 156 aa3.44□□□□□ -1.86
GRAMD1A-207ENST00000598118 KRTAP21-1Q3LI58 79 aa3.21□□□□□ -1.9
GRAMD1A-207ENST00000598118 MUC19Q7Z5P9 8384 aa3.19□□□□□ -1.9
GRAMD1A-207ENST00000598118 PHGR1C9JFL3 82 aa2.99□□□□□ -1.93
GRAMD1A-207ENST00000598118 LCE1FQ5T754 118 aa2.9□□□□□ -1.95
GRAMD1A-207ENST00000598118 MUC16Q8WXI7 14507 aa1.99□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 72.1 ms