RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 CAMK2N1Q7Z7J9 78 aa5.94□□□□□ -1.46
TGFB1-202ENST00000597453 KRTAP12-1P59990 96 aa5.88□□□□□ -1.47
TGFB1-202ENST00000597453 SPINT4Q6UDR6 99 aa5.85□□□□□ -1.47
TGFB1-202ENST00000597453 DSTQ03001 7570 aaKnown RBP5.79□□□□□ -1.48
TGFB1-202ENST00000597453 GPR98Q8WXG9 6306 aa5.77□□□□□ -1.49
TGFB1-202ENST00000597453 KRTAP19-7Q3SYF9 63 aa5.72□□□□□ -1.49
TGFB1-202ENST00000597453 LCE5AQ5TCM9 118 aa5.69□□□□□ -1.5
TGFB1-202ENST00000597453 MT1EP04732 61 aa5.67□□□□□ -1.5
TGFB1-202ENST00000597453 KRTAP19-3Q7Z4W3 81 aa5.64□□□□□ -1.51
TGFB1-202ENST00000597453 KRTAP4-9Q9BYQ8 210 aa5.59□□□□□ -1.51
TGFB1-202ENST00000597453 C10orf95Q9H7T3 257 aa5.58□□□□□ -1.52
TGFB1-202ENST00000597453 TNP1P09430 55 aa5.53□□□□□ -1.52
TGFB1-202ENST00000597453 KRTAP19-5Q3LI72 72 aa5.52□□□□□ -1.53
TGFB1-202ENST00000597453 MT1GP13640 62 aa5.47□□□□□ -1.53
TGFB1-202ENST00000597453 PP632Q6XCG6 107 aa5.47□□□□□ -1.53
TGFB1-202ENST00000597453 LCE3AQ5TA76 89 aa5.44□□□□□ -1.54
TGFB1-202ENST00000597453 LCE1DQ5T752 114 aa5.43□□□□□ -1.54
TGFB1-202ENST00000597453 HMCN1Q96RW7 5635 aa5.43□□□□□ -1.54
TGFB1-202ENST00000597453 KRTAP23-1A1A580 65 aa5.41□□□□□ -1.54
TGFB1-202ENST00000597453 MT1MQ8N339 61 aa5.41□□□□□ -1.54
TGFB1-202ENST00000597453 KRTAP15-1Q3LI76 137 aa5.4□□□□□ -1.54
TGFB1-202ENST00000597453 MT1LQ93083 61 aa5.38□□□□□ -1.55
TGFB1-202ENST00000597453 LCE4AQ5TA78 99 aa5.36□□□□□ -1.55
TGFB1-202ENST00000597453 MT4P47944 62 aa5.35□□□□□ -1.55
TGFB1-202ENST00000597453 AHNAK2Q8IVF2 5795 aa5.35□□□□□ -1.55
TGFB1-202ENST00000597453 KRTAP4-3Q9BYR4 195 aa5.32□□□□□ -1.56
TGFB1-202ENST00000597453 KRTAP5-4Q6L8H1 288 aa5.25□□□□□ -1.57
TGFB1-202ENST00000597453 KRTAP12-3P60328 96 aa5.24□□□□□ -1.57
TGFB1-202ENST00000597453 KRTAP4-6Q9BYQ5 205 aa5.2□□□□□ -1.58
TGFB1-202ENST00000597453 H3BS24 57 aa5.16□□□□□ -1.58
TGFB1-202ENST00000597453 KRTAP4-7Q9BYR0 210 aa5.14□□□□□ -1.59
TGFB1-202ENST00000597453 KRTAP5-10Q6L8G5 202 aa5.13□□□□□ -1.59
TGFB1-202ENST00000597453 NDUFAF8A1L188 74 aa5.1□□□□□ -1.59
TGFB1-202ENST00000597453 SPRR5A0A1B0GTR4 108 aa5.01□□□□□ -1.61
TGFB1-202ENST00000597453 LUZP6Q538Z0 58 aa4.99□□□□□ -1.61
TGFB1-202ENST00000597453 KRTAP19-4Q3LI73 84 aa4.98□□□□□ -1.61
TGFB1-202ENST00000597453 KRTAP5-3Q6L8H2 238 aa4.98□□□□□ -1.61
TGFB1-202ENST00000597453 KRTAP5-5Q701N2 237 aaPredicted RBP4.98□□□□□ -1.61
TGFB1-202ENST00000597453 KRTAP20-2Q3LI61 65 aa4.97□□□□□ -1.61
TGFB1-202ENST00000597453 KRTAP5-7Q6L8G8 165 aa4.94□□□□□ -1.62
TGFB1-202ENST00000597453 SYNE1Q8NF91 8797 aaKnown RBP4.91□□□□□ -1.62
TGFB1-202ENST00000597453 LOC100996750A0A140TA64 210 aa4.88□□□□□ -1.63
TGFB1-202ENST00000597453 KRTAP12-4P60329 112 aa4.84□□□□□ -1.63
TGFB1-202ENST00000597453 LCE3CQ5T5A8 94 aa4.84□□□□□ -1.63
TGFB1-202ENST00000597453 A0A0A0MQY5 61 aa4.67□□□□□ -1.66
TGFB1-202ENST00000597453 MT1AP04731 61 aa4.57□□□□□ -1.68
TGFB1-202ENST00000597453 KRTAP6-1Q3LI64 71 aa4.57□□□□□ -1.68
TGFB1-202ENST00000597453 KRTAP5-2Q701N4 177 aa4.57□□□□□ -1.68
TGFB1-202ENST00000597453 KRTAP4-11Q9BYQ6 195 aa4.56□□□□□ -1.68
TGFB1-202ENST00000597453 KRTAP9-6A8MVA2 160 aa4.55□□□□□ -1.68
TGFB1-202ENST00000597453 AHNAKQ09666 5890 aaKnown RBP4.49□□□□□ -1.69
TGFB1-202ENST00000597453 KRTAP5-8O75690 187 aa4.44□□□□□ -1.7
TGFB1-202ENST00000597453 KRTAP9-4Q9BYQ2 154 aa4.43□□□□□ -1.7
TGFB1-202ENST00000597453 MUC5BQ9HC84 5762 aaPredicted RBP4.42□□□□□ -1.7
TGFB1-202ENST00000597453 MUC5ACP98088 5654 aa4.41□□□□□ -1.7
TGFB1-202ENST00000597453 OBSCNQ5VST9 7968 aa4.4□□□□□ -1.71
TGFB1-202ENST00000597453 KRTAP6-2Q3LI66 62 aa4.39□□□□□ -1.71
TGFB1-202ENST00000597453 INE1O15225 51 aa4.34□□□□□ -1.71
TGFB1-202ENST00000597453 KRTAP9-9Q9BYP9 154 aa4.2□□□□□ -1.74
TGFB1-202ENST00000597453 MT3P25713 68 aa4.17□□□□□ -1.74
TGFB1-202ENST00000597453 KRTAP5-1Q6L8H4 278 aa4.13□□□□□ -1.75
TGFB1-202ENST00000597453 LCE1EQ5T753 118 aa3.87□□□□□ -1.79
TGFB1-202ENST00000597453 KRTAP4-2Q9BYR5 136 aa3.71□□□□□ -1.82
TGFB1-202ENST00000597453 LCE1BQ5T7P3 118 aa3.68□□□□□ -1.82
TGFB1-202ENST00000597453 LCE1CQ5T751 118 aa3.59□□□□□ -1.83
TGFB1-202ENST00000597453 LCE3DQ9BYE3 92 aa3.52□□□□□ -1.85
TGFB1-202ENST00000597453 KRTAP4-12Q9BQ66 201 aa3.43□□□□□ -1.86
TGFB1-202ENST00000597453 LCE3EQ5T5B0 92 aa3.41□□□□□ -1.86
TGFB1-202ENST00000597453 KRTAP5-11Q6L8G4 156 aa3.28□□□□□ -1.88
TGFB1-202ENST00000597453 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.25□□□□□ -1.89
TGFB1-202ENST00000597453 LCE1FQ5T754 118 aa3.21□□□□□ -1.9
TGFB1-202ENST00000597453 PRM1P04553 51 aa3.12□□□□□ -1.91
TGFB1-202ENST00000597453 KRTAP21-2Q3LI59 83 aa3.02□□□□□ -1.93
TGFB1-202ENST00000597453 PHGR1C9JFL3 82 aa2.99□□□□□ -1.93
TGFB1-202ENST00000597453 KRTAP4-4Q9BYR3 166 aa2.8□□□□□ -1.96
TGFB1-202ENST00000597453 MUC19Q7Z5P9 8384 aa2.73□□□□□ -1.97
TGFB1-202ENST00000597453 KRTAP21-1Q3LI58 79 aa2.25□□□□□ -2.05
TGFB1-202ENST00000597453 MUC16Q8WXI7 14507 aa1.86□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 62 ms