RNA–Protein interactions for RNA: ENST00000597047.1

ZNF548-206, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-206ENST00000597047 SPRR2EP22531 72 aa3.51□□□□□ -1.85
ZNF548-206ENST00000597047 SPRR2BP35325 72 aa3.51□□□□□ -1.85
ZNF548-206ENST00000597047 SPRR2AP35326 72 aa3.51□□□□□ -1.85
ZNF548-206ENST00000597047 KRTAP19-5Q3LI72 72 aa3.48□□□□□ -1.85
ZNF548-206ENST00000597047 PRAC1Q96KF2 57 aa3.48□□□□□ -1.85
ZNF548-206ENST00000597047 KRTAP19-7Q3SYF9 63 aa3.44□□□□□ -1.86
ZNF548-206ENST00000597047 MT1EP04732 61 aa3.42□□□□□ -1.86
ZNF548-206ENST00000597047 LCE1AQ5T7P2 110 aa3.42□□□□□ -1.86
ZNF548-206ENST00000597047 GPR98Q8WXG9 6306 aa3.41□□□□□ -1.86
ZNF548-206ENST00000597047 KRTAP23-1A1A580 65 aa3.4□□□□□ -1.87
ZNF548-206ENST00000597047 PP632Q6XCG6 107 aa3.4□□□□□ -1.87
ZNF548-206ENST00000597047 SPRR2DP22532 72 aa3.38□□□□□ -1.87
ZNF548-206ENST00000597047 KRTAP12-3P60328 96 aa3.37□□□□□ -1.87
ZNF548-206ENST00000597047 KRTAP19-3Q7Z4W3 81 aa3.34□□□□□ -1.87
ZNF548-206ENST00000597047 MT1LQ93083 61 aa3.31□□□□□ -1.88
ZNF548-206ENST00000597047 LCE3BQ5TA77 95 aa3.29□□□□□ -1.88
ZNF548-206ENST00000597047 MT1GP13640 62 aa3.28□□□□□ -1.88
ZNF548-206ENST00000597047 LCE5AQ5TCM9 118 aa3.28□□□□□ -1.88
ZNF548-206ENST00000597047 A0A0A0MQY5 61 aa3.27□□□□□ -1.89
ZNF548-206ENST00000597047 MT1MQ8N339 61 aa3.25□□□□□ -1.89
ZNF548-206ENST00000597047 KRTAP15-1Q3LI76 137 aa3.24□□□□□ -1.89
ZNF548-206ENST00000597047 KRTAP4-9Q9BYQ8 210 aa3.23□□□□□ -1.89
ZNF548-206ENST00000597047 KRTAP4-7Q9BYR0 210 aa3.23□□□□□ -1.89
ZNF548-206ENST00000597047 KRTAP4-3Q9BYR4 195 aa3.22□□□□□ -1.89
ZNF548-206ENST00000597047 DSTQ03001 7570 aaKnown RBP3.19□□□□□ -1.9
ZNF548-206ENST00000597047 LCE3CQ5T5A8 94 aa3.13□□□□□ -1.91
ZNF548-206ENST00000597047 NDUFAF8A1L188 74 aa3.08□□□□□ -1.92
ZNF548-206ENST00000597047 KRTAP19-4Q3LI73 84 aa3.08□□□□□ -1.92
ZNF548-206ENST00000597047 LCE1DQ5T752 114 aa3.06□□□□□ -1.92
ZNF548-206ENST00000597047 KRTAP5-10Q6L8G5 202 aa3.06□□□□□ -1.92
ZNF548-206ENST00000597047 LOC100996750A0A140TA64 210 aa3.05□□□□□ -1.92
ZNF548-206ENST00000597047 LUZP6Q538Z0 58 aa3.05□□□□□ -1.92
ZNF548-206ENST00000597047 HMCN1Q96RW7 5635 aa3.02□□□□□ -1.93
ZNF548-206ENST00000597047 SPRR5A0A1B0GTR4 108 aa2.99□□□□□ -1.93
ZNF548-206ENST00000597047 MT4P47944 62 aa2.99□□□□□ -1.93
ZNF548-206ENST00000597047 KRTAP5-7Q6L8G8 165 aa2.99□□□□□ -1.93
ZNF548-206ENST00000597047 AHNAK2Q8IVF2 5795 aa2.98□□□□□ -1.93
ZNF548-206ENST00000597047 LCE4AQ5TA78 99 aa2.95□□□□□ -1.94
ZNF548-206ENST00000597047 KRTAP9-6A8MVA2 160 aa2.93□□□□□ -1.94
ZNF548-206ENST00000597047 KRTAP5-3Q6L8H2 238 aa2.89□□□□□ -1.95
ZNF548-206ENST00000597047 KRTAP5-5Q701N2 237 aaPredicted RBP2.89□□□□□ -1.95
ZNF548-206ENST00000597047 KRTAP5-4Q6L8H1 288 aa2.88□□□□□ -1.95
ZNF548-206ENST00000597047 KRTAP4-6Q9BYQ5 205 aa2.87□□□□□ -1.95
ZNF548-206ENST00000597047 KRTAP12-4P60329 112 aa2.83□□□□□ -1.96
ZNF548-206ENST00000597047 SYNE1Q8NF91 8797 aaKnown RBP2.81□□□□□ -1.96
ZNF548-206ENST00000597047 MT1AP04731 61 aa2.81□□□□□ -1.96
ZNF548-206ENST00000597047 KRTAP6-1Q3LI64 71 aa2.81□□□□□ -1.96
ZNF548-206ENST00000597047 KRTAP20-2Q3LI61 65 aa2.76□□□□□ -1.97
ZNF548-206ENST00000597047 INE1O15225 51 aa2.72□□□□□ -1.97
ZNF548-206ENST00000597047 KRTAP9-4Q9BYQ2 154 aa2.71□□□□□ -1.98
ZNF548-206ENST00000597047 KRTAP6-2Q3LI66 62 aa2.65□□□□□ -1.99
ZNF548-206ENST00000597047 MT3P25713 68 aa2.59□□□□□ -1.99
ZNF548-206ENST00000597047 AHNAKQ09666 5890 aaKnown RBP2.58□□□□□ -2
ZNF548-206ENST00000597047 MUC5ACP98088 5654 aa2.56□□□□□ -2
ZNF548-206ENST00000597047 KRTAP5-2Q701N4 177 aa2.56□□□□□ -2
ZNF548-206ENST00000597047 KRTAP4-11Q9BYQ6 195 aa2.54□□□□□ -2
ZNF548-206ENST00000597047 MUC5BQ9HC84 5762 aaPredicted RBP2.52□□□□□ -2.01
ZNF548-206ENST00000597047 KRTAP5-8O75690 187 aa2.51□□□□□ -2.01
ZNF548-206ENST00000597047 OBSCNQ5VST9 7968 aa2.44□□□□□ -2.02
ZNF548-206ENST00000597047 KRTAP9-9Q9BYP9 154 aa2.42□□□□□ -2.02
ZNF548-206ENST00000597047 LCE3DQ9BYE3 92 aa2.32□□□□□ -2.04
ZNF548-206ENST00000597047 KRTAP5-1Q6L8H4 278 aa2.27□□□□□ -2.05
ZNF548-206ENST00000597047 LCE1EQ5T753 118 aa2.24□□□□□ -2.05
ZNF548-206ENST00000597047 LCE1BQ5T7P3 118 aa2.24□□□□□ -2.05
ZNF548-206ENST00000597047 LCE3EQ5T5B0 92 aa2.23□□□□□ -2.05
ZNF548-206ENST00000597047 KRTAP4-2Q9BYR5 136 aa2.12□□□□□ -2.07
ZNF548-206ENST00000597047 LCE1CQ5T751 118 aa2.09□□□□□ -2.07
ZNF548-206ENST00000597047 KRTAP4-12Q9BQ66 201 aa1.94□□□□□ -2.1
ZNF548-206ENST00000597047 PRM1P04553 51 aa1.91□□□□□ -2.1
ZNF548-206ENST00000597047 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.89□□□□□ -2.11
ZNF548-206ENST00000597047 KRTAP5-11Q6L8G4 156 aa1.86□□□□□ -2.11
ZNF548-206ENST00000597047 PHGR1C9JFL3 82 aa1.82□□□□□ -2.12
ZNF548-206ENST00000597047 KRTAP21-2Q3LI59 83 aa1.81□□□□□ -2.12
ZNF548-206ENST00000597047 LCE1FQ5T754 118 aa1.75□□□□□ -2.13
ZNF548-206ENST00000597047 KRTAP4-4Q9BYR3 166 aa1.73□□□□□ -2.13
ZNF548-206ENST00000597047 MUC19Q7Z5P9 8384 aa1.5□□□□□ -2.17
ZNF548-206ENST00000597047 KRTAP21-1Q3LI58 79 aa1.36□□□□□ -2.19
ZNF548-206ENST00000597047 MUC16Q8WXI7 14507 aa1.09□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 5.9 ms