RNA–Protein interactions for RNA: ENST00000596788.1

IRF3-214, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-214ENST00000596788 SPRR2AP35326 72 aa7.54□□□□□ -1.2
IRF3-214ENST00000596788 LCE1AQ5T7P2 110 aa7.54□□□□□ -1.2
IRF3-214ENST00000596788 MDN1Q9NU22 5596 aa7.49□□□□□ -1.21
IRF3-214ENST00000596788 MT1LQ93083 61 aa7.47□□□□□ -1.21
IRF3-214ENST00000596788 KRTAP19-3Q7Z4W3 81 aa7.46□□□□□ -1.22
IRF3-214ENST00000596788 NEBP20929 6669 aa7.44□□□□□ -1.22
IRF3-214ENST00000596788 LCE5AQ5TCM9 118 aa7.38□□□□□ -1.23
IRF3-214ENST00000596788 KRTAP15-1Q3LI76 137 aa7.37□□□□□ -1.23
IRF3-214ENST00000596788 MT1GP13640 62 aa7.33□□□□□ -1.24
IRF3-214ENST00000596788 SPRR2DP22532 72 aa7.27□□□□□ -1.25
IRF3-214ENST00000596788 MT1MQ8N339 61 aa7.27□□□□□ -1.25
IRF3-214ENST00000596788 SVIPQ8NHG7 77 aa7.25□□□□□ -1.25
IRF3-214ENST00000596788 KRTAP4-7Q9BYR0 210 aa7.17□□□□□ -1.26
IRF3-214ENST00000596788 KRTAP19-4Q3LI73 84 aa7.15□□□□□ -1.26
IRF3-214ENST00000596788 LCE3CQ5T5A8 94 aa7.11□□□□□ -1.27
IRF3-214ENST00000596788 KRTAP4-3Q9BYR4 195 aa7.11□□□□□ -1.27
IRF3-214ENST00000596788 KRTAP20-1Q3LI63 56 aa7.01□□□□□ -1.29
IRF3-214ENST00000596788 LCE3BQ5TA77 95 aa7.01□□□□□ -1.29
IRF3-214ENST00000596788 KRTAP2-3P0C7H8 128 aa6.99□□□□□ -1.29
IRF3-214ENST00000596788 KRTAP2-4Q9BYR9 128 aa6.99□□□□□ -1.29
IRF3-214ENST00000596788 DSTQ03001 7570 aaKnown RBP6.81□□□□□ -1.32
IRF3-214ENST00000596788 KRTAP2-2Q9BYT5 123 aa6.81□□□□□ -1.32
IRF3-214ENST00000596788 KRTAP2-1Q9BYU5 128 aa6.81□□□□□ -1.32
IRF3-214ENST00000596788 LOC100996750A0A140TA64 210 aa6.75□□□□□ -1.33
IRF3-214ENST00000596788 KRTAP9-6A8MVA2 160 aa6.74□□□□□ -1.33
IRF3-214ENST00000596788 SPRR5A0A1B0GTR4 108 aa6.69□□□□□ -1.34
IRF3-214ENST00000596788 KRTAP5-5Q701N2 237 aaPredicted RBP6.6□□□□□ -1.35
IRF3-214ENST00000596788 KRTAP5-4Q6L8H1 288 aa6.49□□□□□ -1.37
IRF3-214ENST00000596788 LCE4AQ5TA78 99 aa6.45□□□□□ -1.38
IRF3-214ENST00000596788 MT1AP04731 61 aa6.36□□□□□ -1.39
IRF3-214ENST00000596788 KRTAP4-9Q9BYQ8 210 aa6.35□□□□□ -1.39
IRF3-214ENST00000596788 MT4P47944 62 aa6.32□□□□□ -1.4
IRF3-214ENST00000596788 KRTAP6-1Q3LI64 71 aa6.3□□□□□ -1.4
IRF3-214ENST00000596788 LCE1DQ5T752 114 aa6.29□□□□□ -1.4
IRF3-214ENST00000596788 LUZP6Q538Z0 58 aa6.25□□□□□ -1.41
IRF3-214ENST00000596788 KRTAP4-6Q9BYQ5 205 aa6.23□□□□□ -1.41
IRF3-214ENST00000596788 GPR98Q8WXG9 6306 aa6.21□□□□□ -1.42
IRF3-214ENST00000596788 SYNE1Q8NF91 8797 aaKnown RBP6.2□□□□□ -1.42
IRF3-214ENST00000596788 KRTAP12-4P60329 112 aa6.18□□□□□ -1.42
IRF3-214ENST00000596788 HMCN1Q96RW7 5635 aa6.14□□□□□ -1.43
IRF3-214ENST00000596788 KRTAP20-2Q3LI61 65 aa6.09□□□□□ -1.43
IRF3-214ENST00000596788 KRTAP9-4Q9BYQ2 154 aa6.05□□□□□ -1.44
IRF3-214ENST00000596788 NDUFAF8A1L188 74 aa5.91□□□□□ -1.46
IRF3-214ENST00000596788 KRTAP5-3Q6L8H2 238 aa5.88□□□□□ -1.47
IRF3-214ENST00000596788 KRTAP6-2Q3LI66 62 aa5.86□□□□□ -1.47
IRF3-214ENST00000596788 KRTAP5-2Q701N4 177 aa5.83□□□□□ -1.48
IRF3-214ENST00000596788 MT3P25713 68 aa5.74□□□□□ -1.49
IRF3-214ENST00000596788 AHNAK2Q8IVF2 5795 aa5.69□□□□□ -1.5
IRF3-214ENST00000596788 KRTAP5-10Q6L8G5 202 aa5.47□□□□□ -1.53
IRF3-214ENST00000596788 KRTAP4-11Q9BYQ6 195 aa5.36□□□□□ -1.55
IRF3-214ENST00000596788 A0A0A0MQY5 61 aa5.26□□□□□ -1.57
IRF3-214ENST00000596788 LCE3DQ9BYE3 92 aa5.25□□□□□ -1.57
IRF3-214ENST00000596788 OBSCNQ5VST9 7968 aa5.23□□□□□ -1.57
IRF3-214ENST00000596788 KRTAP5-8O75690 187 aa5.18□□□□□ -1.58
IRF3-214ENST00000596788 KRTAP5-7Q6L8G8 165 aa5.18□□□□□ -1.58
IRF3-214ENST00000596788 LCE1EQ5T753 118 aa5.09□□□□□ -1.59
IRF3-214ENST00000596788 KRTAP5-1Q6L8H4 278 aa5.09□□□□□ -1.59
IRF3-214ENST00000596788 LCE3EQ5T5B0 92 aa5.06□□□□□ -1.6
IRF3-214ENST00000596788 INE1O15225 51 aa4.98□□□□□ -1.61
IRF3-214ENST00000596788 H3BS24 57 aa4.93□□□□□ -1.62
IRF3-214ENST00000596788 MUC5ACP98088 5654 aa4.88□□□□□ -1.63
IRF3-214ENST00000596788 KRTAP4-2Q9BYR5 136 aa4.8□□□□□ -1.64
IRF3-214ENST00000596788 LCE1BQ5T7P3 118 aa4.78□□□□□ -1.64
IRF3-214ENST00000596788 KRTAP9-9Q9BYP9 154 aa4.74□□□□□ -1.65
IRF3-214ENST00000596788 LCE1CQ5T751 118 aa4.73□□□□□ -1.65
IRF3-214ENST00000596788 AHNAKQ09666 5890 aaKnown RBP4.69□□□□□ -1.66
IRF3-214ENST00000596788 MUC5BQ9HC84 5762 aaPredicted RBP4.51□□□□□ -1.69
IRF3-214ENST00000596788 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.41□□□□□ -1.7
IRF3-214ENST00000596788 PRM1P04553 51 aa4.25□□□□□ -1.73
IRF3-214ENST00000596788 KRTAP5-11Q6L8G4 156 aa4.24□□□□□ -1.73
IRF3-214ENST00000596788 KRTAP21-2Q3LI59 83 aa4.13□□□□□ -1.75
IRF3-214ENST00000596788 KRTAP4-12Q9BQ66 201 aa4.09□□□□□ -1.75
IRF3-214ENST00000596788 LCE1FQ5T754 118 aa3.91□□□□□ -1.78
IRF3-214ENST00000596788 KRTAP4-4Q9BYR3 166 aa3.7□□□□□ -1.82
IRF3-214ENST00000596788 PHGR1C9JFL3 82 aa3.64□□□□□ -1.83
IRF3-214ENST00000596788 MUC19Q7Z5P9 8384 aa3.16□□□□□ -1.9
IRF3-214ENST00000596788 KRTAP21-1Q3LI58 79 aa2.51□□□□□ -2.01
IRF3-214ENST00000596788 MUC16Q8WXI7 14507 aa2.33□□□□□ -2.04
Retrieved 78 of 20,778 RNA–protein pairs in 64.3 ms