RNA–Protein interactions for RNA: ENST00000596304.5

UBA52-208, Transcript of ubiquitin A-52 residue ribosomal protein fusion product 1, human

APPRIS P1 TSL 5 BASIC

Gene UBA52, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA52-208	ENST00000596304	SERP2	Q8N6R1	65 aa		4.74	□□□□□ -1.65
UBA52-208	ENST00000596304		K7ERU9	68 aa		4.73	□□□□□ -1.65
UBA52-208	ENST00000596304	KRTAP19-4	Q3LI73	84 aa		4.7	□□□□□ -1.66
UBA52-208	ENST00000596304	KRTAP4-7	Q9BYR0	210 aa		4.65	□□□□□ -1.67
UBA52-208	ENST00000596304		A8MU10	97 aa		4.64	□□□□□ -1.67
UBA52-208	ENST00000596304	TNP1	P09430	55 aa		4.64	□□□□□ -1.67
UBA52-208	ENST00000596304	KRTAP5-3	Q6L8H2	238 aa		4.64	□□□□□ -1.67
UBA52-208	ENST00000596304	KRTAP5-7	Q6L8G8	165 aa		4.63	□□□□□ -1.67
UBA52-208	ENST00000596304	SMIM26	A0A096LP01	95 aa		4.62	□□□□□ -1.67
UBA52-208	ENST00000596304		A0A1B0GU69	56 aa		4.57	□□□□□ -1.68
UBA52-208	ENST00000596304	KRTAP20-2	Q3LI61	65 aa		4.57	□□□□□ -1.68
UBA52-208	ENST00000596304		H7BZZ5	65 aa		4.53	□□□□□ -1.68
UBA52-208	ENST00000596304	KRTAP12-3	P60328	96 aa		4.53	□□□□□ -1.68
UBA52-208	ENST00000596304	COX7C	P15954	63 aa		4.52	□□□□□ -1.69
UBA52-208	ENST00000596304	KRTAP5-5	Q701N2	237 aa	Predicted RBP	4.52	□□□□□ -1.69
UBA52-208	ENST00000596304	SPRR5	A0A1B0GTR4	108 aa		4.49	□□□□□ -1.69
UBA52-208	ENST00000596304	PCP4	P48539	62 aa		4.47	□□□□□ -1.69
UBA52-208	ENST00000596304	KRTAP4-2	Q9BYR5	136 aa		4.45	□□□□□ -1.7
UBA52-208	ENST00000596304	KRTAP12-4	P60329	112 aa		4.43	□□□□□ -1.7
UBA52-208	ENST00000596304	SYNE1	Q8NF91	8797 aa	Known RBP	4.42	□□□□□ -1.7
UBA52-208	ENST00000596304	KRTAP4-11	Q9BYQ6	195 aa		4.41	□□□□□ -1.7
UBA52-208	ENST00000596304	PRR15L	Q9BU68	103 aa		4.32	□□□□□ -1.72
UBA52-208	ENST00000596304	LINC01558	Q9Y6Z2	57 aa		4.26	□□□□□ -1.73
UBA52-208	ENST00000596304	KRTAP25-1	Q3LHN0	102 aa		4.23	□□□□□ -1.73
UBA52-208	ENST00000596304	KRTAP23-1	A1A580	65 aa		4.21	□□□□□ -1.74
UBA52-208	ENST00000596304	ANAPC13	Q9BS18	74 aa		4.21	□□□□□ -1.74
UBA52-208	ENST00000596304	UQCR11	O14957	56 aa		4.19	□□□□□ -1.74
UBA52-208	ENST00000596304	KRTAP5-2	Q701N4	177 aa		4.18	□□□□□ -1.74
UBA52-208	ENST00000596304	CCDC179	H3BU77	68 aa		4.17	□□□□□ -1.74
UBA52-208	ENST00000596304	ATP5E	P56381	51 aa	Predicted RBP	4.15	□□□□□ -1.75
UBA52-208	ENST00000596304	LCE3C	Q5T5A8	94 aa		4.15	□□□□□ -1.75
UBA52-208	ENST00000596304	KRTAP6-1	Q3LI64	71 aa		4.14	□□□□□ -1.75
UBA52-208	ENST00000596304	KRTAP15-1	Q3LI76	137 aa		4.14	□□□□□ -1.75
UBA52-208	ENST00000596304	MT1A	P04731	61 aa		4.13	□□□□□ -1.75
UBA52-208	ENST00000596304	KRTAP5-8	O75690	187 aa		4.1	□□□□□ -1.75
UBA52-208	ENST00000596304	MIR22HG	Q0VDD5	57 aa		4.08	□□□□□ -1.76
UBA52-208	ENST00000596304		K7ERS5	55 aa		4.02	□□□□□ -1.77
UBA52-208	ENST00000596304	TMEM258	P61165	79 aa		4.01	□□□□□ -1.77
UBA52-208	ENST00000596304	RPS28	P62857	69 aa	Known RBP	3.99	□□□□□ -1.77
UBA52-208	ENST00000596304	KRTAP6-2	Q3LI66	62 aa		3.99	□□□□□ -1.77
UBA52-208	ENST00000596304	OBSCN	Q5VST9	7968 aa		3.97	□□□□□ -1.77
UBA52-208	ENST00000596304	MUC5AC	P98088	5654 aa		3.97	□□□□□ -1.77
UBA52-208	ENST00000596304	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.97	□□□□□ -1.77
UBA52-208	ENST00000596304		A0A0A0MQY5	61 aa		3.96	□□□□□ -1.78
UBA52-208	ENST00000596304	KRTAP9-6	A8MVA2	160 aa		3.95	□□□□□ -1.78
UBA52-208	ENST00000596304	AHNAK	Q09666	5890 aa	Known RBP	3.94	□□□□□ -1.78
UBA52-208	ENST00000596304	PSPHP1	O15172	72 aa		3.87	□□□□□ -1.79
UBA52-208	ENST00000596304		Q1T7F1	81 aa		3.8	□□□□□ -1.8
UBA52-208	ENST00000596304	KRTAP5-1	Q6L8H4	278 aa		3.8	□□□□□ -1.8
UBA52-208	ENST00000596304	CDC42SE1	Q9NRR8	79 aa		3.8	□□□□□ -1.8
UBA52-208	ENST00000596304		V9GYY9	64 aa		3.78	□□□□□ -1.8
UBA52-208	ENST00000596304	MT3	P25713	68 aa		3.77	□□□□□ -1.81
UBA52-208	ENST00000596304	ROMO1	P60602	79 aa		3.72	□□□□□ -1.81
UBA52-208	ENST00000596304		A6NED7	52 aa		3.7	□□□□□ -1.82
UBA52-208	ENST00000596304	PRO0628	Q9UI54	55 aa		3.69	□□□□□ -1.82
UBA52-208	ENST00000596304	BRK1	Q8WUW1	75 aa		3.58	□□□□□ -1.84
UBA52-208	ENST00000596304	LCE1E	Q5T753	118 aa		3.51	□□□□□ -1.85
UBA52-208	ENST00000596304	PMAIP1	Q13794	54 aa		3.43	□□□□□ -1.86
UBA52-208	ENST00000596304	KTN1-AS1	Q86SY8	53 aa		3.38	□□□□□ -1.87
UBA52-208	ENST00000596304	LCE1B	Q5T7P3	118 aa		3.36	□□□□□ -1.87
UBA52-208	ENST00000596304	PRAC1	Q96KF2	57 aa		3.28	□□□□□ -1.88
UBA52-208	ENST00000596304	LCE1C	Q5T751	118 aa		3.27	□□□□□ -1.89
UBA52-208	ENST00000596304	NDUFAF8	A1L188	74 aa		3.08	□□□□□ -1.92
UBA52-208	ENST00000596304	KRTAP5-11	Q6L8G4	156 aa		2.99	□□□□□ -1.93
UBA52-208	ENST00000596304	LCE1F	Q5T754	118 aa		2.95	□□□□□ -1.94
UBA52-208	ENST00000596304	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	2.94	□□□□□ -1.94
UBA52-208	ENST00000596304	LCE3D	Q9BYE3	92 aa		2.93	□□□□□ -1.94
UBA52-208	ENST00000596304	PHGR1	C9JFL3	82 aa		2.81	□□□□□ -1.96
UBA52-208	ENST00000596304	LUZP6	Q538Z0	58 aa		2.77	□□□□□ -1.97
UBA52-208	ENST00000596304	KRTAP21-2	Q3LI59	83 aa		2.72	□□□□□ -1.97
UBA52-208	ENST00000596304	LCE3E	Q5T5B0	92 aa		2.71	□□□□□ -1.98
UBA52-208	ENST00000596304	KRTAP4-4	Q9BYR3	166 aa		2.56	□□□□□ -2
UBA52-208	ENST00000596304	MUC19	Q7Z5P9	8384 aa		2.45	□□□□□ -2.02
UBA52-208	ENST00000596304	INE1	O15225	51 aa		2.29	□□□□□ -2.04
UBA52-208	ENST00000596304	KRTAP21-1	Q3LI58	79 aa		2.11	□□□□□ -2.07
UBA52-208	ENST00000596304	PRM1	P04553	51 aa		1.91	□□□□□ -2.1
UBA52-208	ENST00000596304	MUC16	Q8WXI7	14507 aa		1.76	□□□□□ -2.13

Retrieved 77 of 20,778 RNA–protein pairs in 136.4 ms