RNA–Protein interactions for RNA: ENST00000594814.5

LRIT3-202, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRIT3, Length 3,566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-202ENST00000594814 MT1FP04733 61 aa1.79□□□□□ -2.12
LRIT3-202ENST00000594814 KMT2DO14686 5537 aa1.78□□□□□ -2.12
LRIT3-202ENST00000594814 MT2AP02795 61 aa1.77□□□□□ -2.13
LRIT3-202ENST00000594814 KRTAP10-10P60014 251 aa1.76□□□□□ -2.13
LRIT3-202ENST00000594814 SPRR2GQ9BYE4 73 aa1.73□□□□□ -2.13
LRIT3-202ENST00000594814 KRTAP9-3Q9BYQ3 159 aa1.73□□□□□ -2.13
LRIT3-202ENST00000594814 M0R2T5 61 aa1.72□□□□□ -2.13
LRIT3-202ENST00000594814 LCE4AQ5TA78 99 aa1.72□□□□□ -2.13
LRIT3-202ENST00000594814 LCE1EQ5T753 118 aa1.71□□□□□ -2.14
LRIT3-202ENST00000594814 KRTAP5-9P26371 169 aa1.69□□□□□ -2.14
LRIT3-202ENST00000594814 KRTAP10-12P60413 245 aa1.69□□□□□ -2.14
LRIT3-202ENST00000594814 LCE3AQ5TA76 89 aa1.69□□□□□ -2.14
LRIT3-202ENST00000594814 SYNE2Q8WXH0 6885 aaKnown RBP1.68□□□□□ -2.14
LRIT3-202ENST00000594814 FCGBPQ9Y6R7 5405 aaPredicted RBP1.68□□□□□ -2.14
LRIT3-202ENST00000594814 MT1BP07438 61 aa1.68□□□□□ -2.14
LRIT3-202ENST00000594814 NEBP20929 6669 aa1.68□□□□□ -2.14
LRIT3-202ENST00000594814 KRTAP12-3P60328 96 aa1.67□□□□□ -2.14
LRIT3-202ENST00000594814 KRTAP10-5P60370 271 aa1.67□□□□□ -2.14
LRIT3-202ENST00000594814 KRTAP2-3P0C7H8 128 aa1.66□□□□□ -2.14
LRIT3-202ENST00000594814 KRTAP2-4Q9BYR9 128 aa1.66□□□□□ -2.14
LRIT3-202ENST00000594814 KRTAP2-1Q9BYU5 128 aa1.66□□□□□ -2.14
LRIT3-202ENST00000594814 MACF1Q9UPN3 7388 aaKnown RBP1.65□□□□□ -2.15
LRIT3-202ENST00000594814 KRTAP19-8Q3LI54 63 aa1.63□□□□□ -2.15
LRIT3-202ENST00000594814 KRTAP20-1Q3LI63 56 aa1.63□□□□□ -2.15
LRIT3-202ENST00000594814 KRTAP19-6Q3LI70 58 aa1.63□□□□□ -2.15
LRIT3-202ENST00000594814 MT1XP80297 61 aa1.62□□□□□ -2.15
LRIT3-202ENST00000594814 LCE3CQ5T5A8 94 aa1.61□□□□□ -2.15
LRIT3-202ENST00000594814 MUC12Q9UKN1 5478 aa1.6□□□□□ -2.15
LRIT3-202ENST00000594814 KRTAP5-7Q6L8G8 165 aa1.6□□□□□ -2.15
LRIT3-202ENST00000594814 KRTAP10-7P60409 375 aaPredicted RBP1.58□□□□□ -2.16
LRIT3-202ENST00000594814 MDN1Q9NU22 5596 aa1.58□□□□□ -2.16
LRIT3-202ENST00000594814 KRTAP12-4P60329 112 aa1.57□□□□□ -2.16
LRIT3-202ENST00000594814 KRTAP5-4Q6L8H1 288 aa1.55□□□□□ -2.16
LRIT3-202ENST00000594814 MT3P25713 68 aa1.52□□□□□ -2.17
LRIT3-202ENST00000594814 KRTAP19-5Q3LI72 72 aa1.52□□□□□ -2.17
LRIT3-202ENST00000594814 DSTQ03001 7570 aaKnown RBP1.51□□□□□ -2.17
LRIT3-202ENST00000594814 KRTAP5-10Q6L8G5 202 aa1.49□□□□□ -2.17
LRIT3-202ENST00000594814 AHNAKQ09666 5890 aaKnown RBP1.48□□□□□ -2.17
LRIT3-202ENST00000594814 MT1EP04732 61 aa1.47□□□□□ -2.17
LRIT3-202ENST00000594814 KRTAP19-7Q3SYF9 63 aa1.46□□□□□ -2.18
LRIT3-202ENST00000594814 MT1AP04731 61 aa1.43□□□□□ -2.18
LRIT3-202ENST00000594814 KRTAP9-6A8MVA2 160 aa1.42□□□□□ -2.18
LRIT3-202ENST00000594814 MT1LQ93083 61 aa1.42□□□□□ -2.18
LRIT3-202ENST00000594814 KRTAP4-3Q9BYR4 195 aa1.41□□□□□ -2.18
LRIT3-202ENST00000594814 LCE3EQ5T5B0 92 aa1.38□□□□□ -2.19
LRIT3-202ENST00000594814 AHNAK2Q8IVF2 5795 aa1.38□□□□□ -2.19
LRIT3-202ENST00000594814 GPR98Q8WXG9 6306 aa1.38□□□□□ -2.19
LRIT3-202ENST00000594814 SPRR2FQ96RM1 72 aa1.36□□□□□ -2.19
LRIT3-202ENST00000594814 KRTAP4-4Q9BYR3 166 aa1.35□□□□□ -2.19
LRIT3-202ENST00000594814 KRTAP5-11Q6L8G4 156 aa1.34□□□□□ -2.19
LRIT3-202ENST00000594814 KRTAP5-1Q6L8H4 278 aa1.33□□□□□ -2.2
LRIT3-202ENST00000594814 KRTAP5-2Q701N4 177 aa1.32□□□□□ -2.2
LRIT3-202ENST00000594814 KRTAP5-8O75690 187 aa1.32□□□□□ -2.2
LRIT3-202ENST00000594814 KRTAP5-5Q701N2 237 aaPredicted RBP1.32□□□□□ -2.2
LRIT3-202ENST00000594814 KRTAP19-3Q7Z4W3 81 aa1.31□□□□□ -2.2
LRIT3-202ENST00000594814 MT1MQ8N339 61 aa1.31□□□□□ -2.2
LRIT3-202ENST00000594814 SYNE1Q8NF91 8797 aaKnown RBP1.29□□□□□ -2.2
LRIT3-202ENST00000594814 MT1GP13640 62 aa1.28□□□□□ -2.2
LRIT3-202ENST00000594814 SPRR2EP22531 72 aa1.28□□□□□ -2.2
LRIT3-202ENST00000594814 SPRR2BP35325 72 aa1.28□□□□□ -2.2
LRIT3-202ENST00000594814 SPRR2AP35326 72 aa1.28□□□□□ -2.2
LRIT3-202ENST00000594814 LCE3DQ9BYE3 92 aa1.28□□□□□ -2.21
LRIT3-202ENST00000594814 PRM1P04553 51 aa1.26□□□□□ -2.21
LRIT3-202ENST00000594814 OBSCNQ5VST9 7968 aa1.25□□□□□ -2.21
LRIT3-202ENST00000594814 SPRR2DP22532 72 aa1.22□□□□□ -2.21
LRIT3-202ENST00000594814 MUC5ACP98088 5654 aa1.21□□□□□ -2.22
LRIT3-202ENST00000594814 KRTAP6-1Q3LI64 71 aa1.19□□□□□ -2.22
LRIT3-202ENST00000594814 KRTAP6-2Q3LI66 62 aa1.15□□□□□ -2.23
LRIT3-202ENST00000594814 MT4P47944 62 aa1.13□□□□□ -2.23
LRIT3-202ENST00000594814 LCE1CQ5T751 118 aa1.11□□□□□ -2.23
LRIT3-202ENST00000594814 LCE1BQ5T7P3 118 aa1.11□□□□□ -2.23
LRIT3-202ENST00000594814 KRTAP20-2Q3LI61 65 aa1.07□□□□□ -2.24
LRIT3-202ENST00000594814 KRTAP21-1Q3LI58 79 aa1.06□□□□□ -2.24
LRIT3-202ENST00000594814 MUC19Q7Z5P9 8384 aa1.01□□□□□ -2.25
LRIT3-202ENST00000594814 KRTAP21-2Q3LI59 83 aa0.78□□□□□ -2.28
LRIT3-202ENST00000594814 PHGR1C9JFL3 82 aa0.64□□□□□ -2.31
LRIT3-202ENST00000594814 MUC16Q8WXI7 14507 aa0.58□□□□□ -2.32
Retrieved 77 of 20,778 RNA–protein pairs in 10.6 ms