RNA–Protein interactions for RNA: ENST00000594461.2

LINC00347-202, long intergenic non-protein coding RNA 347, humanhuman

TSL 1 (best) BASIC

Gene LINC00347, Length 2,371 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00347-202ENST00000594461 CRCT1Q9UGL9 99 aa2.72□□□□□ -1.97
LINC00347-202ENST00000594461 KRTAP19-2Q3LHN2 52 aa2.71□□□□□ -1.98
LINC00347-202ENST00000594461 KRTAP2-3P0C7H8 128 aa2.71□□□□□ -1.98
LINC00347-202ENST00000594461 KRTAP2-4Q9BYR9 128 aa2.71□□□□□ -1.98
LINC00347-202ENST00000594461 KRTAP2-1Q9BYU5 128 aa2.71□□□□□ -1.98
LINC00347-202ENST00000594461 FLGP20930 4061 aaPredicted RBP2.7□□□□□ -1.98
LINC00347-202ENST00000594461 KRTAP5-2Q701N4 177 aa2.7□□□□□ -1.98
LINC00347-202ENST00000594461 M0R2T5 61 aa2.68□□□□□ -1.98
LINC00347-202ENST00000594461 LCE1AQ5T7P2 110 aa2.68□□□□□ -1.98
LINC00347-202ENST00000594461 KRTAP6-3Q3LI67 103 aa2.68□□□□□ -1.98
LINC00347-202ENST00000594461 KRTAP12-3P60328 96 aa2.66□□□□□ -1.98
LINC00347-202ENST00000594461 KRTAP10-5P60370 271 aa2.66□□□□□ -1.98
LINC00347-202ENST00000594461 MT1HP80294 61 aa2.65□□□□□ -1.98
LINC00347-202ENST00000594461 LCE1EQ5T753 118 aa2.58□□□□□ -2
LINC00347-202ENST00000594461 KRTAP12-4P60329 112 aa2.56□□□□□ -2
LINC00347-202ENST00000594461 LCE3CQ5T5A8 94 aa2.55□□□□□ -2
LINC00347-202ENST00000594461 MT1FP04733 61 aa2.54□□□□□ -2
LINC00347-202ENST00000594461 MT2AP02795 61 aa2.53□□□□□ -2
LINC00347-202ENST00000594461 KRTAP5-8O75690 187 aa2.51□□□□□ -2.01
LINC00347-202ENST00000594461 KRTAP9-6A8MVA2 160 aa2.49□□□□□ -2.01
LINC00347-202ENST00000594461 SSPOA2VEC9 5147 aa2.48□□□□□ -2.01
LINC00347-202ENST00000594461 LCE1FQ5T754 118 aa2.47□□□□□ -2.01
LINC00347-202ENST00000594461 USH2AO75445 5202 aa2.45□□□□□ -2.02
LINC00347-202ENST00000594461 FSIP2Q5CZC0 6907 aa2.44□□□□□ -2.02
LINC00347-202ENST00000594461 KRTAP4-3Q9BYR4 195 aa2.44□□□□□ -2.02
LINC00347-202ENST00000594461 SPRR2GQ9BYE4 73 aa2.41□□□□□ -2.02
LINC00347-202ENST00000594461 GPR98Q8WXG9 6306 aa2.41□□□□□ -2.02
LINC00347-202ENST00000594461 KRTAP20-1Q3LI63 56 aa2.38□□□□□ -2.03
LINC00347-202ENST00000594461 KRTAP19-5Q3LI72 72 aa2.38□□□□□ -2.03
LINC00347-202ENST00000594461 MT1BP07438 61 aa2.36□□□□□ -2.03
LINC00347-202ENST00000594461 NEBP20929 6669 aa2.33□□□□□ -2.04
LINC00347-202ENST00000594461 PRM1P04553 51 aa2.33□□□□□ -2.04
LINC00347-202ENST00000594461 KRTAP19-8Q3LI54 63 aa2.31□□□□□ -2.04
LINC00347-202ENST00000594461 MT1XP80297 61 aa2.27□□□□□ -2.05
LINC00347-202ENST00000594461 KMT2DO14686 5537 aa2.25□□□□□ -2.05
LINC00347-202ENST00000594461 FCGBPQ9Y6R7 5405 aaPredicted RBP2.24□□□□□ -2.05
LINC00347-202ENST00000594461 KRTAP19-6Q3LI70 58 aa2.21□□□□□ -2.06
LINC00347-202ENST00000594461 OBSCNQ5VST9 7968 aa2.2□□□□□ -2.06
LINC00347-202ENST00000594461 KRTAP5-5Q701N2 237 aaPredicted RBP2.2□□□□□ -2.06
LINC00347-202ENST00000594461 MACF1Q9UPN3 7388 aaKnown RBP2.16□□□□□ -2.06
LINC00347-202ENST00000594461 SYNE2Q8WXH0 6885 aaKnown RBP2.15□□□□□ -2.07
LINC00347-202ENST00000594461 MT3P25713 68 aa2.13□□□□□ -2.07
LINC00347-202ENST00000594461 LCE3EQ5T5B0 92 aa2.13□□□□□ -2.07
LINC00347-202ENST00000594461 SYNE1Q8NF91 8797 aaKnown RBP2.13□□□□□ -2.07
LINC00347-202ENST00000594461 MT1AP04731 61 aa2.1□□□□□ -2.07
LINC00347-202ENST00000594461 LCE3DQ9BYE3 92 aa2.08□□□□□ -2.08
LINC00347-202ENST00000594461 MUC12Q9UKN1 5478 aa2.07□□□□□ -2.08
LINC00347-202ENST00000594461 SPRR2FQ96RM1 72 aa2.06□□□□□ -2.08
LINC00347-202ENST00000594461 MT1EP04732 61 aa2.03□□□□□ -2.08
LINC00347-202ENST00000594461 KRTAP6-2Q3LI66 62 aa2.03□□□□□ -2.08
LINC00347-202ENST00000594461 MDN1Q9NU22 5596 aa2.01□□□□□ -2.09
LINC00347-202ENST00000594461 KRTAP19-7Q3SYF9 63 aa2.01□□□□□ -2.09
LINC00347-202ENST00000594461 MT1LQ93083 61 aa2.01□□□□□ -2.09
LINC00347-202ENST00000594461 MUC5BQ9HC84 5762 aaPredicted RBP2□□□□□ -2.09
LINC00347-202ENST00000594461 KRTAP5-7Q6L8G8 165 aa1.99□□□□□ -2.09
LINC00347-202ENST00000594461 AHNAKQ09666 5890 aaKnown RBP1.97□□□□□ -2.09
LINC00347-202ENST00000594461 SPRR2EP22531 72 aa1.95□□□□□ -2.1
LINC00347-202ENST00000594461 SPRR2BP35325 72 aa1.95□□□□□ -2.1
LINC00347-202ENST00000594461 SPRR2AP35326 72 aa1.95□□□□□ -2.1
LINC00347-202ENST00000594461 DSTQ03001 7570 aaKnown RBP1.95□□□□□ -2.1
LINC00347-202ENST00000594461 AHNAK2Q8IVF2 5795 aa1.94□□□□□ -2.1
LINC00347-202ENST00000594461 MT1GP13640 62 aa1.93□□□□□ -2.1
LINC00347-202ENST00000594461 KRTAP5-10Q6L8G5 202 aa1.9□□□□□ -2.11
LINC00347-202ENST00000594461 KRTAP19-3Q7Z4W3 81 aa1.9□□□□□ -2.11
LINC00347-202ENST00000594461 SPRR2DP22532 72 aa1.88□□□□□ -2.11
LINC00347-202ENST00000594461 MT1MQ8N339 61 aa1.87□□□□□ -2.11
LINC00347-202ENST00000594461 KRTAP6-1Q3LI64 71 aa1.71□□□□□ -2.14
LINC00347-202ENST00000594461 LCE1CQ5T751 118 aa1.71□□□□□ -2.14
LINC00347-202ENST00000594461 LCE1BQ5T7P3 118 aa1.71□□□□□ -2.14
LINC00347-202ENST00000594461 MT4P47944 62 aa1.7□□□□□ -2.14
LINC00347-202ENST00000594461 MUC19Q7Z5P9 8384 aa1.68□□□□□ -2.14
LINC00347-202ENST00000594461 MUC5ACP98088 5654 aa1.67□□□□□ -2.14
LINC00347-202ENST00000594461 KRTAP21-1Q3LI58 79 aa1.57□□□□□ -2.16
LINC00347-202ENST00000594461 KRTAP20-2Q3LI61 65 aa1.55□□□□□ -2.16
LINC00347-202ENST00000594461 PHGR1C9JFL3 82 aa1.1□□□□□ -2.23
LINC00347-202ENST00000594461 KRTAP21-2Q3LI59 83 aa1.07□□□□□ -2.24
LINC00347-202ENST00000594461 MUC16Q8WXI7 14507 aa0.8□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 105.2 ms