RNA–Protein interactions for RNA: ENST00000594047.2

SYNM-204, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 6,407 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-204ENST00000594047 MT1MQ8N339 61 aa5.67□□□□□ -1.5
SYNM-204ENST00000594047 SYNE2Q8WXH0 6885 aaKnown RBP5.65□□□□□ -1.51
SYNM-204ENST00000594047 KRTAP20-1Q3LI63 56 aa5.61□□□□□ -1.51
SYNM-204ENST00000594047 MT3P25713 68 aa5.61□□□□□ -1.51
SYNM-204ENST00000594047 LCE5AQ5TCM9 118 aa5.6□□□□□ -1.51
SYNM-204ENST00000594047 PRM1P04553 51 aa5.59□□□□□ -1.51
SYNM-204ENST00000594047 KMT2CQ8NEZ4 4911 aaKnown RBP5.58□□□□□ -1.52
SYNM-204ENST00000594047 KRTAP4-9Q9BYQ8 210 aa5.54□□□□□ -1.52
SYNM-204ENST00000594047 KRTAP19-2Q3LHN2 52 aa5.54□□□□□ -1.52
SYNM-204ENST00000594047 FLGP20930 4061 aaPredicted RBP5.53□□□□□ -1.52
SYNM-204ENST00000594047 KRTAP9-7A8MTY7 169 aa5.51□□□□□ -1.53
SYNM-204ENST00000594047 MUC17Q685J3 4493 aa5.49□□□□□ -1.53
SYNM-204ENST00000594047 EPPK1P58107 5090 aaKnown RBP5.37□□□□□ -1.55
SYNM-204ENST00000594047 LCE1CQ5T751 118 aa5.24□□□□□ -1.57
SYNM-204ENST00000594047 LCE1EQ5T753 118 aa5.24□□□□□ -1.57
SYNM-204ENST00000594047 LCE1FQ5T754 118 aa5.24□□□□□ -1.57
SYNM-204ENST00000594047 LCE1AQ5T7P2 110 aa5.24□□□□□ -1.57
SYNM-204ENST00000594047 LCE2AQ5TA79 106 aaPredicted RBP5.23□□□□□ -1.57
SYNM-204ENST00000594047 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.16□□□□□ -1.58
SYNM-204ENST00000594047 KRTAP2-3P0C7H8 128 aa5.14□□□□□ -1.59
SYNM-204ENST00000594047 KRTAP2-4Q9BYR9 128 aa5.14□□□□□ -1.59
SYNM-204ENST00000594047 KRTAP19-7Q3SYF9 63 aa5.13□□□□□ -1.59
SYNM-204ENST00000594047 KRTAP6-2Q3LI66 62 aa5.13□□□□□ -1.59
SYNM-204ENST00000594047 ABCA13Q86UQ4 5058 aa5.13□□□□□ -1.59
SYNM-204ENST00000594047 MUC2Q02817 5179 aa5.13□□□□□ -1.59
SYNM-204ENST00000594047 MT1AP04731 61 aa5.12□□□□□ -1.59
SYNM-204ENST00000594047 FAT4Q6V0I7 4981 aa5.12□□□□□ -1.59
SYNM-204ENST00000594047 HMCN2Q8NDA2 5059 aa5.11□□□□□ -1.59
SYNM-204ENST00000594047 KRTAP2-1Q9BYU5 128 aa5.11□□□□□ -1.59
SYNM-204ENST00000594047 KRTAP6-1Q3LI64 71 aa5.03□□□□□ -1.6
SYNM-204ENST00000594047 KRTAP6-3Q3LI67 103 aa5.03□□□□□ -1.6
SYNM-204ENST00000594047 UBR4Q5T4S7 5183 aa4.94□□□□□ -1.62
SYNM-204ENST00000594047 KRTAP2-2Q9BYT5 123 aa4.94□□□□□ -1.62
SYNM-204ENST00000594047 RNF213Q63HN8 5207 aa4.91□□□□□ -1.62
SYNM-204ENST00000594047 SYNE1Q8NF91 8797 aaKnown RBP4.87□□□□□ -1.63
SYNM-204ENST00000594047 KRTAP9-4Q9BYQ2 154 aa4.84□□□□□ -1.63
SYNM-204ENST00000594047 LCE4AQ5TA78 99 aa4.82□□□□□ -1.64
SYNM-204ENST00000594047 OBSCNQ5VST9 7968 aa4.69□□□□□ -1.66
SYNM-204ENST00000594047 KRTAP9-6A8MVA2 160 aa4.67□□□□□ -1.66
SYNM-204ENST00000594047 KRTAP9-9Q9BYP9 154 aa4.62□□□□□ -1.67
SYNM-204ENST00000594047 KMT2DO14686 5537 aa4.48□□□□□ -1.69
SYNM-204ENST00000594047 DSTQ03001 7570 aaKnown RBP4.42□□□□□ -1.7
SYNM-204ENST00000594047 KRTAP4-6Q9BYQ5 205 aa4.4□□□□□ -1.7
SYNM-204ENST00000594047 FCGBPQ9Y6R7 5405 aaPredicted RBP4.35□□□□□ -1.71
SYNM-204ENST00000594047 MACF1Q9UPN3 7388 aaKnown RBP4.34□□□□□ -1.71
SYNM-204ENST00000594047 KRTAP4-12Q9BQ66 201 aa4.3□□□□□ -1.72
SYNM-204ENST00000594047 KRTAP4-2Q9BYR5 136 aa4.3□□□□□ -1.72
SYNM-204ENST00000594047 KRTAP20-2Q3LI61 65 aa4.3□□□□□ -1.72
SYNM-204ENST00000594047 KRTAP4-4Q9BYR3 166 aa4.29□□□□□ -1.72
SYNM-204ENST00000594047 USH2AO75445 5202 aa4.27□□□□□ -1.73
SYNM-204ENST00000594047 KRTAP4-11Q9BYQ6 195 aa4.26□□□□□ -1.73
SYNM-204ENST00000594047 NEBP20929 6669 aa4.2□□□□□ -1.74
SYNM-204ENST00000594047 SSPOA2VEC9 5147 aa4.03□□□□□ -1.76
SYNM-204ENST00000594047 KRTAP5-9P26371 169 aa3.92□□□□□ -1.78
SYNM-204ENST00000594047 MUC12Q9UKN1 5478 aa3.79□□□□□ -1.8
SYNM-204ENST00000594047 KRTAP5-4Q6L8H1 288 aa3.65□□□□□ -1.83
SYNM-204ENST00000594047 MUC19Q7Z5P9 8384 aa3.6□□□□□ -1.83
SYNM-204ENST00000594047 MDN1Q9NU22 5596 aa3.55□□□□□ -1.84
SYNM-204ENST00000594047 KRTAP5-5Q701N2 237 aaPredicted RBP3.42□□□□□ -1.86
SYNM-204ENST00000594047 GPR98Q8WXG9 6306 aa3.39□□□□□ -1.87
SYNM-204ENST00000594047 KRTAP5-3Q6L8H2 238 aa3.36□□□□□ -1.87
SYNM-204ENST00000594047 PHGR1C9JFL3 82 aa3.2□□□□□ -1.9
SYNM-204ENST00000594047 MUC5ACP98088 5654 aa3.2□□□□□ -1.9
SYNM-204ENST00000594047 KRTAP5-8O75690 187 aa3.17□□□□□ -1.9
SYNM-204ENST00000594047 HMCN1Q96RW7 5635 aa2.95□□□□□ -1.94
SYNM-204ENST00000594047 KRTAP5-10Q6L8G5 202 aa2.64□□□□□ -1.99
SYNM-204ENST00000594047 KRTAP5-2Q701N4 177 aa2.62□□□□□ -1.99
SYNM-204ENST00000594047 AHNAK2Q8IVF2 5795 aa2.55□□□□□ -2
SYNM-204ENST00000594047 KRTAP5-1Q6L8H4 278 aa2.54□□□□□ -2
SYNM-204ENST00000594047 MUC5BQ9HC84 5762 aaPredicted RBP2.54□□□□□ -2
SYNM-204ENST00000594047 AHNAKQ09666 5890 aaKnown RBP2.38□□□□□ -2.03
SYNM-204ENST00000594047 KRTAP5-11Q6L8G4 156 aa2.33□□□□□ -2.04
SYNM-204ENST00000594047 KRTAP21-2Q3LI59 83 aa2.27□□□□□ -2.05
SYNM-204ENST00000594047 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.05□□□□□ -2.08
SYNM-204ENST00000594047 KRTAP21-1Q3LI58 79 aa2.03□□□□□ -2.08
SYNM-204ENST00000594047 KRTAP5-7Q6L8G8 165 aa1.96□□□□□ -2.09
SYNM-204ENST00000594047 MUC16Q8WXI7 14507 aa1.75□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 10.7 ms