RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 KRTAP25-1Q3LHN0 102 aa4.8□□□□□ -1.64
DDX39A-219ENST00000592927 TNP1P09430 55 aa4.79□□□□□ -1.64
DDX39A-219ENST00000592927 A0A0A0MQY5 61 aa4.78□□□□□ -1.64
DDX39A-219ENST00000592927 KRTAP8-1Q8IUC2 63 aa4.75□□□□□ -1.65
DDX39A-219ENST00000592927 KRTAP4-9Q9BYQ8 210 aa4.73□□□□□ -1.65
DDX39A-219ENST00000592927 KRTAP10-7P60409 375 aaPredicted RBP4.72□□□□□ -1.65
DDX39A-219ENST00000592927 KRTAP10-12P60413 245 aa4.69□□□□□ -1.66
DDX39A-219ENST00000592927 KRTAP23-1A1A580 65 aa4.67□□□□□ -1.66
DDX39A-219ENST00000592927 PRAC1Q96KF2 57 aa4.65□□□□□ -1.67
DDX39A-219ENST00000592927 PP632Q6XCG6 107 aa4.64□□□□□ -1.67
DDX39A-219ENST00000592927 KRTAP4-8A0A0G2JLE6 195 aa4.63□□□□□ -1.67
DDX39A-219ENST00000592927 KRTAP4-8Q9BYQ9 185 aa4.63□□□□□ -1.67
DDX39A-219ENST00000592927 HMCN1Q96RW7 5635 aa4.55□□□□□ -1.68
DDX39A-219ENST00000592927 LCE3AQ5TA76 89 aa4.55□□□□□ -1.68
DDX39A-219ENST00000592927 AHNAK2Q8IVF2 5795 aa4.54□□□□□ -1.68
DDX39A-219ENST00000592927 KRTAP5-10Q6L8G5 202 aa4.52□□□□□ -1.69
DDX39A-219ENST00000592927 LCE1DQ5T752 114 aa4.51□□□□□ -1.69
DDX39A-219ENST00000592927 KRTAP5-7Q6L8G8 165 aa4.43□□□□□ -1.7
DDX39A-219ENST00000592927 KRTAP19-7Q3SYF9 63 aa4.4□□□□□ -1.71
DDX39A-219ENST00000592927 SPRR5A0A1B0GTR4 108 aa4.39□□□□□ -1.71
DDX39A-219ENST00000592927 MT4P47944 62 aa4.39□□□□□ -1.71
DDX39A-219ENST00000592927 KRTAP12-3P60328 96 aa4.39□□□□□ -1.71
DDX39A-219ENST00000592927 KRTAP19-5Q3LI72 72 aa4.39□□□□□ -1.71
DDX39A-219ENST00000592927 MT1EP04732 61 aa4.36□□□□□ -1.71
DDX39A-219ENST00000592927 KRTAP15-1Q3LI76 137 aa4.29□□□□□ -1.72
DDX39A-219ENST00000592927 LCE4AQ5TA78 99 aa4.29□□□□□ -1.72
DDX39A-219ENST00000592927 KRTAP5-3Q6L8H2 238 aa4.27□□□□□ -1.73
DDX39A-219ENST00000592927 KRTAP19-3Q7Z4W3 81 aa4.27□□□□□ -1.73
DDX39A-219ENST00000592927 KRTAP19-4Q3LI73 84 aa4.24□□□□□ -1.73
DDX39A-219ENST00000592927 LCE5AQ5TCM9 118 aa4.23□□□□□ -1.73
DDX39A-219ENST00000592927 MT1LQ93083 61 aa4.22□□□□□ -1.73
DDX39A-219ENST00000592927 MT1GP13640 62 aa4.21□□□□□ -1.74
DDX39A-219ENST00000592927 KRTAP4-6Q9BYQ5 205 aa4.19□□□□□ -1.74
DDX39A-219ENST00000592927 MT1MQ8N339 61 aa4.13□□□□□ -1.75
DDX39A-219ENST00000592927 LCE3CQ5T5A8 94 aa4.1□□□□□ -1.75
DDX39A-219ENST00000592927 KRTAP5-4Q6L8H1 288 aa4.08□□□□□ -1.76
DDX39A-219ENST00000592927 KRTAP4-7Q9BYR0 210 aa4.02□□□□□ -1.77
DDX39A-219ENST00000592927 KRTAP4-3Q9BYR4 195 aa4.02□□□□□ -1.77
DDX39A-219ENST00000592927 AHNAKQ09666 5890 aaKnown RBP3.98□□□□□ -1.77
DDX39A-219ENST00000592927 KRTAP20-2Q3LI61 65 aa3.92□□□□□ -1.78
DDX39A-219ENST00000592927 MUC5ACP98088 5654 aa3.9□□□□□ -1.79
DDX39A-219ENST00000592927 LUZP6Q538Z0 58 aa3.89□□□□□ -1.79
DDX39A-219ENST00000592927 KRTAP9-6A8MVA2 160 aa3.82□□□□□ -1.8
DDX39A-219ENST00000592927 MUC5BQ9HC84 5762 aaPredicted RBP3.81□□□□□ -1.8
DDX39A-219ENST00000592927 LOC100996750A0A140TA64 210 aa3.8□□□□□ -1.8
DDX39A-219ENST00000592927 KRTAP5-5Q701N2 237 aaPredicted RBP3.75□□□□□ -1.81
DDX39A-219ENST00000592927 KRTAP4-11Q9BYQ6 195 aa3.74□□□□□ -1.81
DDX39A-219ENST00000592927 KRTAP5-8O75690 187 aa3.7□□□□□ -1.82
DDX39A-219ENST00000592927 KRTAP12-4P60329 112 aa3.7□□□□□ -1.82
DDX39A-219ENST00000592927 NDUFAF8A1L188 74 aa3.68□□□□□ -1.82
DDX39A-219ENST00000592927 SYNE1Q8NF91 8797 aaKnown RBP3.63□□□□□ -1.83
DDX39A-219ENST00000592927 MT1AP04731 61 aa3.59□□□□□ -1.83
DDX39A-219ENST00000592927 KRTAP9-9Q9BYP9 154 aa3.57□□□□□ -1.84
DDX39A-219ENST00000592927 KRTAP6-1Q3LI64 71 aa3.55□□□□□ -1.84
DDX39A-219ENST00000592927 OBSCNQ5VST9 7968 aa3.48□□□□□ -1.85
DDX39A-219ENST00000592927 KRTAP5-2Q701N4 177 aa3.47□□□□□ -1.85
DDX39A-219ENST00000592927 KRTAP9-4Q9BYQ2 154 aa3.45□□□□□ -1.86
DDX39A-219ENST00000592927 KRTAP6-2Q3LI66 62 aa3.35□□□□□ -1.87
DDX39A-219ENST00000592927 MT3P25713 68 aa3.29□□□□□ -1.88
DDX39A-219ENST00000592927 KRTAP5-1Q6L8H4 278 aa3.24□□□□□ -1.89
DDX39A-219ENST00000592927 INE1O15225 51 aa3.12□□□□□ -1.91
DDX39A-219ENST00000592927 LCE3DQ9BYE3 92 aa3.07□□□□□ -1.92
DDX39A-219ENST00000592927 LCE3EQ5T5B0 92 aa2.99□□□□□ -1.93
DDX39A-219ENST00000592927 LCE1EQ5T753 118 aa2.94□□□□□ -1.94
DDX39A-219ENST00000592927 KRTAP4-12Q9BQ66 201 aa2.8□□□□□ -1.96
DDX39A-219ENST00000592927 KRTAP4-2Q9BYR5 136 aa2.8□□□□□ -1.96
DDX39A-219ENST00000592927 LCE1BQ5T7P3 118 aa2.77□□□□□ -1.97
DDX39A-219ENST00000592927 LCE1CQ5T751 118 aa2.73□□□□□ -1.97
DDX39A-219ENST00000592927 PHGR1C9JFL3 82 aa2.68□□□□□ -1.98
DDX39A-219ENST00000592927 KRTAP5-11Q6L8G4 156 aa2.61□□□□□ -1.99
DDX39A-219ENST00000592927 PRM1P04553 51 aa2.53□□□□□ -2
DDX39A-219ENST00000592927 LCE1FQ5T754 118 aa2.53□□□□□ -2
DDX39A-219ENST00000592927 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.51□□□□□ -2.01
DDX39A-219ENST00000592927 KRTAP21-2Q3LI59 83 aa2.33□□□□□ -2.04
DDX39A-219ENST00000592927 MUC19Q7Z5P9 8384 aa2.2□□□□□ -2.06
DDX39A-219ENST00000592927 KRTAP4-4Q9BYR3 166 aa2.1□□□□□ -2.07
DDX39A-219ENST00000592927 KRTAP21-1Q3LI58 79 aa2.03□□□□□ -2.08
DDX39A-219ENST00000592927 MUC16Q8WXI7 14507 aa1.49□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 24.2 ms