RNA–Protein interactions for RNA: ENST00000591075.1

NPC1-211, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 809 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-211ENST00000591075 KRTAP12-1P59990 96 aa3.82□□□□□ -1.8
NPC1-211ENST00000591075 LCE1EQ5T753 118 aa3.81□□□□□ -1.8
NPC1-211ENST00000591075 CAMK2N1Q7Z7J9 78 aa3.79□□□□□ -1.8
NPC1-211ENST00000591075 KRTAP10-5P60370 271 aa3.78□□□□□ -1.8
NPC1-211ENST00000591075 KRTAP6-3Q3LI67 103 aa3.78□□□□□ -1.8
NPC1-211ENST00000591075 PRO2289Q9P1D8 64 aa3.78□□□□□ -1.8
NPC1-211ENST00000591075 KRTAP12-2P59991 146 aa3.77□□□□□ -1.81
NPC1-211ENST00000591075 LCE1AQ5T7P2 110 aa3.71□□□□□ -1.82
NPC1-211ENST00000591075 NEBP20929 6669 aa3.66□□□□□ -1.82
NPC1-211ENST00000591075 ROMO1P60602 79 aa3.66□□□□□ -1.82
NPC1-211ENST00000591075 MT1XP80297 61 aa3.64□□□□□ -1.83
NPC1-211ENST00000591075 TNP1P09430 55 aa3.63□□□□□ -1.83
NPC1-211ENST00000591075 KRTAP25-1Q3LHN0 102 aa3.63□□□□□ -1.83
NPC1-211ENST00000591075 C10orf95Q9H7T3 257 aa3.61□□□□□ -1.83
NPC1-211ENST00000591075 MUC12Q9UKN1 5478 aa3.6□□□□□ -1.83
NPC1-211ENST00000591075 NDUFAF8A1L188 74 aa3.6□□□□□ -1.83
NPC1-211ENST00000591075 KRTAP2-2Q9BYT5 123 aa3.6□□□□□ -1.83
NPC1-211ENST00000591075 KRTAP8-1Q8IUC2 63 aa3.57□□□□□ -1.84
NPC1-211ENST00000591075 KMT2DO14686 5537 aa3.56□□□□□ -1.84
NPC1-211ENST00000591075 SPRR2FQ96RM1 72 aa3.56□□□□□ -1.84
NPC1-211ENST00000591075 MDN1Q9NU22 5596 aa3.53□□□□□ -1.84
NPC1-211ENST00000591075 KRTAP20-1Q3LI63 56 aa3.53□□□□□ -1.84
NPC1-211ENST00000591075 PP632Q6XCG6 107 aa3.53□□□□□ -1.84
NPC1-211ENST00000591075 KRTAP10-12P60413 245 aa3.51□□□□□ -1.85
NPC1-211ENST00000591075 SPRR2EP22531 72 aa3.5□□□□□ -1.85
NPC1-211ENST00000591075 SPRR2BP35325 72 aa3.5□□□□□ -1.85
NPC1-211ENST00000591075 SPRR2AP35326 72 aa3.5□□□□□ -1.85
NPC1-211ENST00000591075 LUZP6Q538Z0 58 aa3.49□□□□□ -1.85
NPC1-211ENST00000591075 OBSCNQ5VST9 7968 aa3.48□□□□□ -1.85
NPC1-211ENST00000591075 KRTAP5-2Q701N4 177 aa3.45□□□□□ -1.86
NPC1-211ENST00000591075 MT3P25713 68 aa3.44□□□□□ -1.86
NPC1-211ENST00000591075 KRTAP2-3P0C7H8 128 aa3.43□□□□□ -1.86
NPC1-211ENST00000591075 KRTAP2-4Q9BYR9 128 aa3.43□□□□□ -1.86
NPC1-211ENST00000591075 SPRR2DP22532 72 aa3.4□□□□□ -1.87
NPC1-211ENST00000591075 KRTAP4-3Q9BYR4 195 aa3.38□□□□□ -1.87
NPC1-211ENST00000591075 LCE3AQ5TA76 89 aa3.36□□□□□ -1.87
NPC1-211ENST00000591075 KRTAP2-1Q9BYU5 128 aa3.32□□□□□ -1.88
NPC1-211ENST00000591075 KRTAP12-3P60328 96 aa3.3□□□□□ -1.88
NPC1-211ENST00000591075 KRTAP19-5Q3LI72 72 aa3.26□□□□□ -1.89
NPC1-211ENST00000591075 KRTAP19-7Q3SYF9 63 aa3.25□□□□□ -1.89
NPC1-211ENST00000591075 KRTAP9-6A8MVA2 160 aa3.23□□□□□ -1.89
NPC1-211ENST00000591075 MT1EP04732 61 aa3.21□□□□□ -1.9
NPC1-211ENST00000591075 KRTAP19-3Q7Z4W3 81 aa3.2□□□□□ -1.9
NPC1-211ENST00000591075 MT1GP13640 62 aa3.16□□□□□ -1.9
NPC1-211ENST00000591075 MT1LQ93083 61 aa3.14□□□□□ -1.91
NPC1-211ENST00000591075 DSTQ03001 7570 aaKnown RBP3.12□□□□□ -1.91
NPC1-211ENST00000591075 LCE3CQ5T5A8 94 aa3.08□□□□□ -1.92
NPC1-211ENST00000591075 MT1MQ8N339 61 aa3.06□□□□□ -1.92
NPC1-211ENST00000591075 LCE1FQ5T754 118 aa3.04□□□□□ -1.92
NPC1-211ENST00000591075 SPRR5A0A1B0GTR4 108 aa2.98□□□□□ -1.93
NPC1-211ENST00000591075 GPR98Q8WXG9 6306 aa2.97□□□□□ -1.93
NPC1-211ENST00000591075 MT4P47944 62 aa2.96□□□□□ -1.94
NPC1-211ENST00000591075 KRTAP5-8O75690 187 aa2.92□□□□□ -1.94
NPC1-211ENST00000591075 HMCN1Q96RW7 5635 aa2.92□□□□□ -1.94
NPC1-211ENST00000591075 INE1O15225 51 aa2.85□□□□□ -1.95
NPC1-211ENST00000591075 KRTAP12-4P60329 112 aa2.8□□□□□ -1.96
NPC1-211ENST00000591075 AHNAK2Q8IVF2 5795 aa2.8□□□□□ -1.96
NPC1-211ENST00000591075 KRTAP5-5Q701N2 237 aaPredicted RBP2.75□□□□□ -1.97
NPC1-211ENST00000591075 KRTAP20-2Q3LI61 65 aa2.73□□□□□ -1.97
NPC1-211ENST00000591075 SYNE1Q8NF91 8797 aaKnown RBP2.73□□□□□ -1.97
NPC1-211ENST00000591075 MT1AP04731 61 aa2.71□□□□□ -1.98
NPC1-211ENST00000591075 KRTAP5-10Q6L8G5 202 aa2.69□□□□□ -1.98
NPC1-211ENST00000591075 LCE3EQ5T5B0 92 aa2.62□□□□□ -1.99
NPC1-211ENST00000591075 KRTAP6-1Q3LI64 71 aa2.6□□□□□ -1.99
NPC1-211ENST00000591075 KRTAP5-7Q6L8G8 165 aa2.6□□□□□ -1.99
NPC1-211ENST00000591075 KRTAP6-2Q3LI66 62 aa2.5□□□□□ -2.01
NPC1-211ENST00000591075 LCE1CQ5T751 118 aa2.42□□□□□ -2.02
NPC1-211ENST00000591075 LCE1BQ5T7P3 118 aa2.42□□□□□ -2.02
NPC1-211ENST00000591075 MUC5BQ9HC84 5762 aaPredicted RBP2.32□□□□□ -2.04
NPC1-211ENST00000591075 LCE3DQ9BYE3 92 aa2.32□□□□□ -2.04
NPC1-211ENST00000591075 AHNAKQ09666 5890 aaKnown RBP2.31□□□□□ -2.04
NPC1-211ENST00000591075 MUC5ACP98088 5654 aa2.27□□□□□ -2.05
NPC1-211ENST00000591075 MUC19Q7Z5P9 8384 aa2.14□□□□□ -2.07
NPC1-211ENST00000591075 PRM1P04553 51 aa1.83□□□□□ -2.12
NPC1-211ENST00000591075 KRTAP21-2Q3LI59 83 aa1.82□□□□□ -2.12
NPC1-211ENST00000591075 PHGR1C9JFL3 82 aa1.62□□□□□ -2.15
NPC1-211ENST00000591075 KRTAP21-1Q3LI58 79 aa1.24□□□□□ -2.21
NPC1-211ENST00000591075 MUC16Q8WXI7 14507 aa1.07□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 99.5 ms