RNA–Protein interactions for RNA: ENST00000590671.5

NCLN-205, Transcript of nicalin, humanhuman

TSL 2 BASIC

Gene NCLN, Length 2,070 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-205ENST00000590671 SYNE2Q8WXH0 6885 aaKnown RBP7.06□□□□□ -1.28
NCLN-205ENST00000590671 SPRR2FQ96RM1 72 aa6.97□□□□□ -1.29
NCLN-205ENST00000590671 KRTAP9-6A0A140TA67 174 aa6.89□□□□□ -1.31
NCLN-205ENST00000590671 KRTAP9-6A8MVA2 160 aa6.89□□□□□ -1.31
NCLN-205ENST00000590671 KRTAP19-3Q7Z4W3 81 aa6.88□□□□□ -1.31
NCLN-205ENST00000590671 KRTAP4-3Q9BYR4 195 aa6.84□□□□□ -1.31
NCLN-205ENST00000590671 KRTAP19-4Q3LI73 84 aa6.81□□□□□ -1.32
NCLN-205ENST00000590671 MT1MQ8N339 61 aa6.8□□□□□ -1.32
NCLN-205ENST00000590671 MT1GP13640 62 aa6.79□□□□□ -1.32
NCLN-205ENST00000590671 KRTAP5-9P26371 169 aa6.75□□□□□ -1.33
NCLN-205ENST00000590671 LCE5AQ5TCM9 118 aa6.75□□□□□ -1.33
NCLN-205ENST00000590671 MDN1Q9NU22 5596 aa6.75□□□□□ -1.33
NCLN-205ENST00000590671 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.69□□□□□ -1.34
NCLN-205ENST00000590671 LOC100996750A0A140TA64 210 aa6.65□□□□□ -1.35
NCLN-205ENST00000590671 LCE1AQ5T7P2 110 aa6.64□□□□□ -1.35
NCLN-205ENST00000590671 DSTQ03001 7570 aaKnown RBP6.6□□□□□ -1.35
NCLN-205ENST00000590671 SPRR2EP22531 72 aa6.54□□□□□ -1.36
NCLN-205ENST00000590671 SPRR2BP35325 72 aa6.54□□□□□ -1.36
NCLN-205ENST00000590671 SPRR2AP35326 72 aa6.54□□□□□ -1.36
NCLN-205ENST00000590671 KRTAP6-3Q3LI67 103 aa6.51□□□□□ -1.37
NCLN-205ENST00000590671 INE1O15225 51 aa6.47□□□□□ -1.37
NCLN-205ENST00000590671 KRTAP2-3P0C7H8 128 aa6.32□□□□□ -1.4
NCLN-205ENST00000590671 KRTAP2-4Q9BYR9 128 aa6.32□□□□□ -1.4
NCLN-205ENST00000590671 KRTAP2-1Q9BYU5 128 aa6.32□□□□□ -1.4
NCLN-205ENST00000590671 SPRR2DP22532 72 aa6.27□□□□□ -1.41
NCLN-205ENST00000590671 KRTAP9-7A8MTY7 169 aa6.22□□□□□ -1.41
NCLN-205ENST00000590671 NEBP20929 6669 aa6.18□□□□□ -1.42
NCLN-205ENST00000590671 KRTAP5-5Q701N2 237 aaPredicted RBP6.11□□□□□ -1.43
NCLN-205ENST00000590671 KRTAP6-1Q3LI64 71 aa6.05□□□□□ -1.44
NCLN-205ENST00000590671 LCE3BQ5TA77 95 aa6.02□□□□□ -1.45
NCLN-205ENST00000590671 MT1AP04731 61 aa5.99□□□□□ -1.45
NCLN-205ENST00000590671 SYNE1Q8NF91 8797 aaKnown RBP5.94□□□□□ -1.46
NCLN-205ENST00000590671 KRTAP4-9Q9BYQ8 210 aa5.74□□□□□ -1.49
NCLN-205ENST00000590671 KRTAP9-4Q9BYQ2 154 aa5.7□□□□□ -1.5
NCLN-205ENST00000590671 KRTAP5-4Q6L8H1 288 aa5.69□□□□□ -1.5
NCLN-205ENST00000590671 KRTAP4-6Q9BYQ5 205 aa5.54□□□□□ -1.52
NCLN-205ENST00000590671 MT4P47944 62 aa5.54□□□□□ -1.52
NCLN-205ENST00000590671 KRTAP12-4P60329 112 aa5.54□□□□□ -1.52
NCLN-205ENST00000590671 KRTAP6-2Q3LI66 62 aa5.54□□□□□ -1.52
NCLN-205ENST00000590671 KRTAP2-2Q9BYT5 123 aa5.54□□□□□ -1.52
NCLN-205ENST00000590671 KRTAP20-1Q3LI63 56 aa5.5□□□□□ -1.53
NCLN-205ENST00000590671 LCE4AQ5TA78 99 aa5.46□□□□□ -1.54
NCLN-205ENST00000590671 MT3P25713 68 aa5.39□□□□□ -1.55
NCLN-205ENST00000590671 HMCN1Q96RW7 5635 aa5.37□□□□□ -1.55
NCLN-205ENST00000590671 LCE3DQ9BYE3 92 aa5.37□□□□□ -1.55
NCLN-205ENST00000590671 LCE1DQ5T752 114 aa5.36□□□□□ -1.55
NCLN-205ENST00000590671 KRTAP20-2Q3LI61 65 aa5.35□□□□□ -1.55
NCLN-205ENST00000590671 OBSCNQ5VST9 7968 aa5.27□□□□□ -1.57
NCLN-205ENST00000590671 LCE3EQ5T5B0 92 aa5.22□□□□□ -1.57
NCLN-205ENST00000590671 KRTAP5-2Q701N4 177 aa5.2□□□□□ -1.58
NCLN-205ENST00000590671 KRTAP5-3Q6L8H2 238 aa5.15□□□□□ -1.59
NCLN-205ENST00000590671 PRM1P04553 51 aa4.73□□□□□ -1.65
NCLN-205ENST00000590671 AHNAK2Q8IVF2 5795 aa4.6□□□□□ -1.67
NCLN-205ENST00000590671 LCE1EQ5T753 118 aa4.59□□□□□ -1.67
NCLN-205ENST00000590671 KRTAP4-11Q9BYQ6 195 aa4.59□□□□□ -1.67
NCLN-205ENST00000590671 GPR98Q8WXG9 6306 aa4.55□□□□□ -1.68
NCLN-205ENST00000590671 KRTAP5-1Q6L8H4 278 aa4.52□□□□□ -1.69
NCLN-205ENST00000590671 MUC5ACP98088 5654 aa4.49□□□□□ -1.69
NCLN-205ENST00000590671 LCE1BQ5T7P3 118 aa4.47□□□□□ -1.69
NCLN-205ENST00000590671 KRTAP5-8O75690 187 aa4.42□□□□□ -1.7
NCLN-205ENST00000590671 KRTAP5-10Q6L8G5 202 aa4.39□□□□□ -1.71
NCLN-205ENST00000590671 KRTAP4-2Q9BYR5 136 aa4.39□□□□□ -1.71
NCLN-205ENST00000590671 LCE1CQ5T751 118 aa4.32□□□□□ -1.72
NCLN-205ENST00000590671 KRTAP5-7Q6L8G8 165 aa4.24□□□□□ -1.73
NCLN-205ENST00000590671 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.04□□□□□ -1.76
NCLN-205ENST00000590671 KRTAP21-2Q3LI59 83 aa3.94□□□□□ -1.78
NCLN-205ENST00000590671 MUC5BQ9HC84 5762 aaPredicted RBP3.91□□□□□ -1.78
NCLN-205ENST00000590671 KRTAP9-9Q9BYP9 154 aa3.87□□□□□ -1.79
NCLN-205ENST00000590671 KRTAP5-11Q6L8G4 156 aa3.78□□□□□ -1.8
NCLN-205ENST00000590671 KRTAP4-12Q9BQ66 201 aa3.71□□□□□ -1.82
NCLN-205ENST00000590671 KRTAP4-4Q9BYR3 166 aa3.61□□□□□ -1.83
NCLN-205ENST00000590671 AHNAKQ09666 5890 aaKnown RBP3.54□□□□□ -1.84
NCLN-205ENST00000590671 PHGR1C9JFL3 82 aa3.28□□□□□ -1.88
NCLN-205ENST00000590671 LCE1FQ5T754 118 aa3.27□□□□□ -1.89
NCLN-205ENST00000590671 MUC19Q7Z5P9 8384 aa3.13□□□□□ -1.91
NCLN-205ENST00000590671 KRTAP21-1Q3LI58 79 aa2.97□□□□□ -1.93
NCLN-205ENST00000590671 MUC16Q8WXI7 14507 aa2.09□□□□□ -2.07
Retrieved 77 of 20,778 RNA–protein pairs in 2667.1 ms