RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 KRTAP23-1A1A580 65 aa6.91□□□□□ -1.3
DDX39A-214ENST00000590556 KRTAP12-3P60328 96 aa6.9□□□□□ -1.3
DDX39A-214ENST00000590556 KRTAP2-3P0C7H8 128 aa6.88□□□□□ -1.31
DDX39A-214ENST00000590556 LCE5AQ5TCM9 118 aa6.88□□□□□ -1.31
DDX39A-214ENST00000590556 KRTAP2-4Q9BYR9 128 aa6.88□□□□□ -1.31
DDX39A-214ENST00000590556 MT1LQ93083 61 aa6.84□□□□□ -1.31
DDX39A-214ENST00000590556 MT1GP13640 62 aa6.82□□□□□ -1.32
DDX39A-214ENST00000590556 PP632Q6XCG6 107 aa6.77□□□□□ -1.33
DDX39A-214ENST00000590556 LCE3BQ5TA77 95 aa6.73□□□□□ -1.33
DDX39A-214ENST00000590556 MT1MQ8N339 61 aa6.71□□□□□ -1.34
DDX39A-214ENST00000590556 KRTAP2-2Q9BYT5 123 aa6.67□□□□□ -1.34
DDX39A-214ENST00000590556 KRTAP2-1Q9BYU5 128 aa6.67□□□□□ -1.34
DDX39A-214ENST00000590556 PMAIP1Q13794 54 aa6.6□□□□□ -1.35
DDX39A-214ENST00000590556 KRTAP15-1Q3LI76 137 aa6.6□□□□□ -1.35
DDX39A-214ENST00000590556 DSTQ03001 7570 aaKnown RBP6.55□□□□□ -1.36
DDX39A-214ENST00000590556 KRTAP4-3Q9BYR4 195 aa6.54□□□□□ -1.36
DDX39A-214ENST00000590556 KRTAP19-4Q3LI73 84 aa6.53□□□□□ -1.36
DDX39A-214ENST00000590556 KRTAP4-7Q9BYR0 210 aa6.53□□□□□ -1.36
DDX39A-214ENST00000590556 PRO0628Q9UI54 55 aa6.48□□□□□ -1.37
DDX39A-214ENST00000590556 LCE3CQ5T5A8 94 aa6.4□□□□□ -1.38
DDX39A-214ENST00000590556 PRAC1Q96KF2 57 aa6.25□□□□□ -1.41
DDX39A-214ENST00000590556 GPR98Q8WXG9 6306 aa6.24□□□□□ -1.41
DDX39A-214ENST00000590556 LOC100996750A0A140TA64 210 aa6.17□□□□□ -1.42
DDX39A-214ENST00000590556 LCE4AQ5TA78 99 aa6.17□□□□□ -1.42
DDX39A-214ENST00000590556 KRTAP4-9Q9BYQ8 210 aa6.14□□□□□ -1.43
DDX39A-214ENST00000590556 KRTAP5-4Q6L8H1 288 aa6.12□□□□□ -1.43
DDX39A-214ENST00000590556 KRTAP5-5Q701N2 237 aaPredicted RBP6.09□□□□□ -1.43
DDX39A-214ENST00000590556 KTN1-AS1Q86SY8 53 aa6.09□□□□□ -1.43
DDX39A-214ENST00000590556 MT4P47944 62 aa6.05□□□□□ -1.44
DDX39A-214ENST00000590556 LCE1DQ5T752 114 aa6.05□□□□□ -1.44
DDX39A-214ENST00000590556 KRTAP9-6A8MVA2 160 aa6.01□□□□□ -1.45
DDX39A-214ENST00000590556 HMCN1Q96RW7 5635 aa5.94□□□□□ -1.46
DDX39A-214ENST00000590556 KRTAP4-6Q9BYQ5 205 aa5.92□□□□□ -1.46
DDX39A-214ENST00000590556 KRTAP12-4P60329 112 aa5.86□□□□□ -1.47
DDX39A-214ENST00000590556 MT1AP04731 61 aa5.83□□□□□ -1.48
DDX39A-214ENST00000590556 SYNE1Q8NF91 8797 aaKnown RBP5.81□□□□□ -1.48
DDX39A-214ENST00000590556 SVIPQ8NHG7 77 aa5.81□□□□□ -1.48
DDX39A-214ENST00000590556 SPRR5A0A1B0GTR4 108 aa5.78□□□□□ -1.48
DDX39A-214ENST00000590556 KRTAP6-1Q3LI64 71 aa5.77□□□□□ -1.49
DDX39A-214ENST00000590556 KRTAP20-2Q3LI61 65 aa5.76□□□□□ -1.49
DDX39A-214ENST00000590556 AHNAK2Q8IVF2 5795 aa5.71□□□□□ -1.5
DDX39A-214ENST00000590556 KRTAP9-4Q9BYQ2 154 aa5.59□□□□□ -1.51
DDX39A-214ENST00000590556 KRTAP5-10Q6L8G5 202 aa5.58□□□□□ -1.52
DDX39A-214ENST00000590556 KRTAP5-3Q6L8H2 238 aa5.56□□□□□ -1.52
DDX39A-214ENST00000590556 KRTAP5-2Q701N4 177 aa5.44□□□□□ -1.54
DDX39A-214ENST00000590556 KRTAP6-2Q3LI66 62 aa5.43□□□□□ -1.54
DDX39A-214ENST00000590556 KRTAP5-7Q6L8G8 165 aa5.42□□□□□ -1.54
DDX39A-214ENST00000590556 MT3P25713 68 aa5.32□□□□□ -1.56
DDX39A-214ENST00000590556 LUZP6Q538Z0 58 aa5.21□□□□□ -1.58
DDX39A-214ENST00000590556 KRTAP4-11Q9BYQ6 195 aa5.15□□□□□ -1.59
DDX39A-214ENST00000590556 KRTAP5-8O75690 187 aa4.96□□□□□ -1.62
DDX39A-214ENST00000590556 OBSCNQ5VST9 7968 aa4.95□□□□□ -1.62
DDX39A-214ENST00000590556 KRTAP5-1Q6L8H4 278 aa4.8□□□□□ -1.64
DDX39A-214ENST00000590556 AHNAKQ09666 5890 aaKnown RBP4.79□□□□□ -1.64
DDX39A-214ENST00000590556 MUC5ACP98088 5654 aa4.77□□□□□ -1.65
DDX39A-214ENST00000590556 LCE1EQ5T753 118 aa4.76□□□□□ -1.65
DDX39A-214ENST00000590556 LCE3DQ9BYE3 92 aa4.71□□□□□ -1.66
DDX39A-214ENST00000590556 MUC5BQ9HC84 5762 aaPredicted RBP4.71□□□□□ -1.66
DDX39A-214ENST00000590556 KRTAP9-9Q9BYP9 154 aa4.65□□□□□ -1.67
DDX39A-214ENST00000590556 NDUFAF8A1L188 74 aa4.61□□□□□ -1.67
DDX39A-214ENST00000590556 LCE3EQ5T5B0 92 aa4.5□□□□□ -1.69
DDX39A-214ENST00000590556 LCE1BQ5T7P3 118 aa4.48□□□□□ -1.69
DDX39A-214ENST00000590556 KRTAP4-2Q9BYR5 136 aa4.45□□□□□ -1.7
DDX39A-214ENST00000590556 LCE1CQ5T751 118 aa4.42□□□□□ -1.7
DDX39A-214ENST00000590556 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.07□□□□□ -1.76
DDX39A-214ENST00000590556 KRTAP5-11Q6L8G4 156 aa3.96□□□□□ -1.78
DDX39A-214ENST00000590556 KRTAP4-12Q9BQ66 201 aa3.9□□□□□ -1.79
DDX39A-214ENST00000590556 A0A0A0MQY5 61 aa3.88□□□□□ -1.79
DDX39A-214ENST00000590556 KRTAP21-2Q3LI59 83 aa3.79□□□□□ -1.8
DDX39A-214ENST00000590556 INE1O15225 51 aa3.77□□□□□ -1.81
DDX39A-214ENST00000590556 LCE1FQ5T754 118 aa3.75□□□□□ -1.81
DDX39A-214ENST00000590556 PRM1P04553 51 aa3.62□□□□□ -1.83
DDX39A-214ENST00000590556 KRTAP4-4Q9BYR3 166 aa3.42□□□□□ -1.86
DDX39A-214ENST00000590556 PHGR1C9JFL3 82 aa3.41□□□□□ -1.86
DDX39A-214ENST00000590556 MUC19Q7Z5P9 8384 aa3.06□□□□□ -1.92
DDX39A-214ENST00000590556 H3BS24 57 aa2.86□□□□□ -1.95
DDX39A-214ENST00000590556 KRTAP21-1Q3LI58 79 aa2.52□□□□□ -2.01
DDX39A-214ENST00000590556 MUC16Q8WXI7 14507 aa2.2□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 5.3 ms