RNA–Protein interactions for RNA: ENST00000590550.6

MBD3-207, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2 BASIC

Gene MBD3, Length 2,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-207ENST00000590550 KRTAP19-6Q3LI70 58 aa6.42□□□□□ -1.38
MBD3-207ENST00000590550 KRTAP4-3Q9BYR4 195 aa6.41□□□□□ -1.38
MBD3-207ENST00000590550 LOC100996750A0A140TA64 210 aa6.37□□□□□ -1.39
MBD3-207ENST00000590550 LCE2DQ5TA82 110 aaPredicted RBP6.3□□□□□ -1.4
MBD3-207ENST00000590550 DSTQ03001 7570 aaKnown RBP6.28□□□□□ -1.4
MBD3-207ENST00000590550 MT1GP13640 62 aa6.27□□□□□ -1.41
MBD3-207ENST00000590550 KRTAP19-4Q3LI73 84 aa6.27□□□□□ -1.41
MBD3-207ENST00000590550 CRCT1Q9UGL9 99 aa6.23□□□□□ -1.41
MBD3-207ENST00000590550 KRTAP12-4P60329 112 aa6.19□□□□□ -1.42
MBD3-207ENST00000590550 MT1MQ8N339 61 aa6.17□□□□□ -1.42
MBD3-207ENST00000590550 KRTAP19-3Q7Z4W3 81 aa6.15□□□□□ -1.43
MBD3-207ENST00000590550 MACF1Q9UPN3 7388 aaKnown RBP6.03□□□□□ -1.44
MBD3-207ENST00000590550 SPRR2FQ96RM1 72 aa6.02□□□□□ -1.45
MBD3-207ENST00000590550 KRTAP9-2Q9BYQ4 174 aa6□□□□□ -1.45
MBD3-207ENST00000590550 LCE5AQ5TCM9 118 aa5.93□□□□□ -1.46
MBD3-207ENST00000590550 SYNE2Q8WXH0 6885 aaKnown RBP5.91□□□□□ -1.46
MBD3-207ENST00000590550 SYNE1Q8NF91 8797 aaKnown RBP5.86□□□□□ -1.47
MBD3-207ENST00000590550 MDN1Q9NU22 5596 aa5.85□□□□□ -1.47
MBD3-207ENST00000590550 LCE3BQ5TA77 95 aa5.81□□□□□ -1.48
MBD3-207ENST00000590550 KRTAP4-9Q9BYQ8 210 aa5.78□□□□□ -1.48
MBD3-207ENST00000590550 KRTAP6-1Q3LI64 71 aa5.66□□□□□ -1.5
MBD3-207ENST00000590550 KRTAP9-7A8MTY7 169 aa5.61□□□□□ -1.51
MBD3-207ENST00000590550 PRM1P04553 51 aa5.59□□□□□ -1.52
MBD3-207ENST00000590550 LCE1AQ5T7P2 110 aa5.55□□□□□ -1.52
MBD3-207ENST00000590550 OBSCNQ5VST9 7968 aa5.54□□□□□ -1.52
MBD3-207ENST00000590550 MT1AP04731 61 aa5.49□□□□□ -1.53
MBD3-207ENST00000590550 KRTAP5-5Q701N2 237 aaPredicted RBP5.45□□□□□ -1.54
MBD3-207ENST00000590550 KRTAP9-6A0A140TA67 174 aa5.45□□□□□ -1.54
MBD3-207ENST00000590550 LCE3DQ9BYE3 92 aa5.44□□□□□ -1.54
MBD3-207ENST00000590550 SPRR2EP22531 72 aa5.44□□□□□ -1.54
MBD3-207ENST00000590550 SPRR2BP35325 72 aa5.44□□□□□ -1.54
MBD3-207ENST00000590550 SPRR2AP35326 72 aa5.44□□□□□ -1.54
MBD3-207ENST00000590550 KRTAP5-9P26371 169 aa5.43□□□□□ -1.54
MBD3-207ENST00000590550 LCE3EQ5T5B0 92 aa5.41□□□□□ -1.54
MBD3-207ENST00000590550 KRTAP6-3Q3LI67 103 aa5.32□□□□□ -1.56
MBD3-207ENST00000590550 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.32□□□□□ -1.56
MBD3-207ENST00000590550 SPRR2DP22532 72 aa5.18□□□□□ -1.58
MBD3-207ENST00000590550 KRTAP6-2Q3LI66 62 aa5.17□□□□□ -1.58
MBD3-207ENST00000590550 KRTAP9-4Q9BYQ2 154 aa5.17□□□□□ -1.58
MBD3-207ENST00000590550 KRTAP2-2Q9BYT5 123 aa5.06□□□□□ -1.6
MBD3-207ENST00000590550 NEBP20929 6669 aa4.94□□□□□ -1.62
MBD3-207ENST00000590550 MT3P25713 68 aa4.93□□□□□ -1.62
MBD3-207ENST00000590550 LCE1EQ5T753 118 aa4.84□□□□□ -1.63
MBD3-207ENST00000590550 KRTAP4-6Q9BYQ5 205 aa4.71□□□□□ -1.66
MBD3-207ENST00000590550 KRTAP5-4Q6L8H1 288 aa4.7□□□□□ -1.66
MBD3-207ENST00000590550 MT4P47944 62 aa4.68□□□□□ -1.66
MBD3-207ENST00000590550 LCE1DQ5T752 114 aa4.65□□□□□ -1.67
MBD3-207ENST00000590550 KRTAP20-2Q3LI61 65 aa4.48□□□□□ -1.69
MBD3-207ENST00000590550 HMCN1Q96RW7 5635 aa4.48□□□□□ -1.69
MBD3-207ENST00000590550 KRTAP20-1Q3LI63 56 aa4.4□□□□□ -1.7
MBD3-207ENST00000590550 KRTAP5-2Q701N4 177 aa4.39□□□□□ -1.71
MBD3-207ENST00000590550 LCE4AQ5TA78 99 aa4.35□□□□□ -1.71
MBD3-207ENST00000590550 MUC5ACP98088 5654 aa4.28□□□□□ -1.72
MBD3-207ENST00000590550 KRTAP5-3Q6L8H2 238 aa4.24□□□□□ -1.73
MBD3-207ENST00000590550 KRTAP4-11Q9BYQ6 195 aa4.22□□□□□ -1.73
MBD3-207ENST00000590550 LCE1BQ5T7P3 118 aa4.13□□□□□ -1.75
MBD3-207ENST00000590550 KRTAP5-10Q6L8G5 202 aa3.92□□□□□ -1.78
MBD3-207ENST00000590550 KRTAP4-2Q9BYR5 136 aa3.85□□□□□ -1.79
MBD3-207ENST00000590550 LCE1FQ5T754 118 aa3.84□□□□□ -1.79
MBD3-207ENST00000590550 KRTAP5-1Q6L8H4 278 aa3.82□□□□□ -1.8
MBD3-207ENST00000590550 MUC19Q7Z5P9 8384 aa3.77□□□□□ -1.81
MBD3-207ENST00000590550 LCE1CQ5T751 118 aa3.76□□□□□ -1.81
MBD3-207ENST00000590550 AHNAK2Q8IVF2 5795 aa3.73□□□□□ -1.81
MBD3-207ENST00000590550 KRTAP21-2Q3LI59 83 aa3.61□□□□□ -1.83
MBD3-207ENST00000590550 KRTAP5-8O75690 187 aa3.53□□□□□ -1.84
MBD3-207ENST00000590550 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.5□□□□□ -1.85
MBD3-207ENST00000590550 KRTAP4-4Q9BYR3 166 aa3.47□□□□□ -1.85
MBD3-207ENST00000590550 KRTAP21-1Q3LI58 79 aa3.46□□□□□ -1.86
MBD3-207ENST00000590550 GPR98Q8WXG9 6306 aa3.42□□□□□ -1.86
MBD3-207ENST00000590550 MUC5BQ9HC84 5762 aaPredicted RBP3.39□□□□□ -1.87
MBD3-207ENST00000590550 KRTAP5-7Q6L8G8 165 aa3.36□□□□□ -1.87
MBD3-207ENST00000590550 KRTAP4-12Q9BQ66 201 aa3.27□□□□□ -1.89
MBD3-207ENST00000590550 KRTAP5-11Q6L8G4 156 aa3.22□□□□□ -1.89
MBD3-207ENST00000590550 KRTAP9-9Q9BYP9 154 aa3.06□□□□□ -1.92
MBD3-207ENST00000590550 PHGR1C9JFL3 82 aa2.82□□□□□ -1.96
MBD3-207ENST00000590550 AHNAKQ09666 5890 aaKnown RBP2.75□□□□□ -1.97
MBD3-207ENST00000590550 MUC16Q8WXI7 14507 aa1.85□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 95.4 ms