RNA–Protein interactions for RNA: ENST00000590325.1

CALR-207, Transcript of calreticulin, humanhuman

TSL 2

Gene CALR, Length 781 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-207ENST00000590325 KRTAP19-5Q3LI72 72 aa5.31□□□□□ -1.56
CALR-207ENST00000590325 LCE3AQ5TA76 89 aa5.3□□□□□ -1.56
CALR-207ENST00000590325 SPRR2DP22532 72 aa5.27□□□□□ -1.57
CALR-207ENST00000590325 KRTAP2-3P0C7H8 128 aa5.24□□□□□ -1.57
CALR-207ENST00000590325 KRTAP2-4Q9BYR9 128 aa5.24□□□□□ -1.57
CALR-207ENST00000590325 ROMO1P60602 79 aa5.23□□□□□ -1.57
CALR-207ENST00000590325 KRTAP19-3Q7Z4W3 81 aa5.21□□□□□ -1.58
CALR-207ENST00000590325 LCE5AQ5TCM9 118 aa5.19□□□□□ -1.58
CALR-207ENST00000590325 MT1LQ93083 61 aa5.12□□□□□ -1.59
CALR-207ENST00000590325 DSTQ03001 7570 aaKnown RBP5.12□□□□□ -1.59
CALR-207ENST00000590325 MT1GP13640 62 aa5.11□□□□□ -1.59
CALR-207ENST00000590325 KRTAP12-3P60328 96 aa5.11□□□□□ -1.59
CALR-207ENST00000590325 LCE3BQ5TA77 95 aa5.1□□□□□ -1.59
CALR-207ENST00000590325 KRTAP2-2Q9BYT5 123 aa5.09□□□□□ -1.59
CALR-207ENST00000590325 KRTAP2-1Q9BYU5 128 aa5.09□□□□□ -1.59
CALR-207ENST00000590325 H3BS24 57 aa5.07□□□□□ -1.6
CALR-207ENST00000590325 KRTAP23-1A1A580 65 aa5.06□□□□□ -1.6
CALR-207ENST00000590325 PP632Q6XCG6 107 aa5.05□□□□□ -1.6
CALR-207ENST00000590325 MT1MQ8N339 61 aa5.03□□□□□ -1.6
CALR-207ENST00000590325 KRTAP15-1Q3LI76 137 aa4.95□□□□□ -1.62
CALR-207ENST00000590325 KRTAP4-3Q9BYR4 195 aa4.91□□□□□ -1.62
CALR-207ENST00000590325 KRTAP4-7Q9BYR0 210 aa4.89□□□□□ -1.63
CALR-207ENST00000590325 KRTAP19-4Q3LI73 84 aa4.82□□□□□ -1.64
CALR-207ENST00000590325 LCE3CQ5T5A8 94 aa4.73□□□□□ -1.65
CALR-207ENST00000590325 NDUFAF8A1L188 74 aa4.7□□□□□ -1.66
CALR-207ENST00000590325 KRTAP4-9Q9BYQ8 210 aa4.69□□□□□ -1.66
CALR-207ENST00000590325 LCE4AQ5TA78 99 aa4.67□□□□□ -1.66
CALR-207ENST00000590325 HMCN1Q96RW7 5635 aa4.66□□□□□ -1.66
CALR-207ENST00000590325 KRTAP5-4Q6L8H1 288 aa4.65□□□□□ -1.67
CALR-207ENST00000590325 LOC100996750A0A140TA64 210 aa4.61□□□□□ -1.67
CALR-207ENST00000590325 LCE1DQ5T752 114 aa4.61□□□□□ -1.67
CALR-207ENST00000590325 KRTAP5-5Q701N2 237 aaPredicted RBP4.61□□□□□ -1.67
CALR-207ENST00000590325 MT4P47944 62 aa4.59□□□□□ -1.67
CALR-207ENST00000590325 GPR98Q8WXG9 6306 aa4.55□□□□□ -1.68
CALR-207ENST00000590325 KRTAP4-6Q9BYQ5 205 aa4.5□□□□□ -1.69
CALR-207ENST00000590325 SYNE1Q8NF91 8797 aaKnown RBP4.48□□□□□ -1.69
CALR-207ENST00000590325 SPRR5A0A1B0GTR4 108 aa4.47□□□□□ -1.69
CALR-207ENST00000590325 KRTAP9-6A8MVA2 160 aa4.47□□□□□ -1.69
CALR-207ENST00000590325 LUZP6Q538Z0 58 aa4.42□□□□□ -1.7
CALR-207ENST00000590325 KRTAP12-4P60329 112 aa4.4□□□□□ -1.71
CALR-207ENST00000590325 AHNAK2Q8IVF2 5795 aa4.4□□□□□ -1.71
CALR-207ENST00000590325 KRTAP20-2Q3LI61 65 aa4.37□□□□□ -1.71
CALR-207ENST00000590325 MT1AP04731 61 aa4.35□□□□□ -1.71
CALR-207ENST00000590325 KRTAP6-1Q3LI64 71 aa4.32□□□□□ -1.72
CALR-207ENST00000590325 A0A0A0MQY5 61 aa4.31□□□□□ -1.72
CALR-207ENST00000590325 KRTAP5-10Q6L8G5 202 aa4.25□□□□□ -1.73
CALR-207ENST00000590325 KRTAP5-3Q6L8H2 238 aa4.24□□□□□ -1.73
CALR-207ENST00000590325 KRTAP9-4Q9BYQ2 154 aa4.19□□□□□ -1.74
CALR-207ENST00000590325 KRTAP5-2Q701N4 177 aa4.12□□□□□ -1.75
CALR-207ENST00000590325 KRTAP6-2Q3LI66 62 aa4.08□□□□□ -1.76
CALR-207ENST00000590325 KRTAP5-7Q6L8G8 165 aa4.08□□□□□ -1.76
CALR-207ENST00000590325 INE1O15225 51 aa4.01□□□□□ -1.77
CALR-207ENST00000590325 MT3P25713 68 aa3.97□□□□□ -1.77
CALR-207ENST00000590325 KRTAP4-11Q9BYQ6 195 aa3.93□□□□□ -1.78
CALR-207ENST00000590325 OBSCNQ5VST9 7968 aa3.91□□□□□ -1.78
CALR-207ENST00000590325 KRTAP5-8O75690 187 aa3.79□□□□□ -1.8
CALR-207ENST00000590325 MUC5ACP98088 5654 aa3.68□□□□□ -1.82
CALR-207ENST00000590325 KRTAP5-1Q6L8H4 278 aa3.66□□□□□ -1.82
CALR-207ENST00000590325 MUC5BQ9HC84 5762 aaPredicted RBP3.6□□□□□ -1.83
CALR-207ENST00000590325 AHNAKQ09666 5890 aaKnown RBP3.59□□□□□ -1.83
CALR-207ENST00000590325 LCE1EQ5T753 118 aa3.59□□□□□ -1.83
CALR-207ENST00000590325 KRTAP9-9Q9BYP9 154 aa3.53□□□□□ -1.84
CALR-207ENST00000590325 LCE3DQ9BYE3 92 aa3.46□□□□□ -1.86
CALR-207ENST00000590325 KRTAP4-2Q9BYR5 136 aa3.37□□□□□ -1.87
CALR-207ENST00000590325 LCE1BQ5T7P3 118 aa3.35□□□□□ -1.87
CALR-207ENST00000590325 LCE1CQ5T751 118 aa3.33□□□□□ -1.88
CALR-207ENST00000590325 LCE3EQ5T5B0 92 aa3.29□□□□□ -1.88
CALR-207ENST00000590325 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.07□□□□□ -1.92
CALR-207ENST00000590325 KRTAP5-11Q6L8G4 156 aa2.99□□□□□ -1.93
CALR-207ENST00000590325 KRTAP4-12Q9BQ66 201 aa2.95□□□□□ -1.94
CALR-207ENST00000590325 KRTAP21-2Q3LI59 83 aa2.84□□□□□ -1.95
CALR-207ENST00000590325 LCE1FQ5T754 118 aa2.84□□□□□ -1.95
CALR-207ENST00000590325 PRM1P04553 51 aa2.73□□□□□ -1.97
CALR-207ENST00000590325 PHGR1C9JFL3 82 aa2.58□□□□□ -2
CALR-207ENST00000590325 KRTAP4-4Q9BYR3 166 aa2.57□□□□□ -2
CALR-207ENST00000590325 MUC19Q7Z5P9 8384 aa2.39□□□□□ -2.03
CALR-207ENST00000590325 KRTAP21-1Q3LI58 79 aa1.86□□□□□ -2.11
CALR-207ENST00000590325 MUC16Q8WXI7 14507 aa1.72□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 9.7 ms