RNA–Protein interactions for RNA: ENST00000590315.5

DDX39A-213, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-213ENST00000590315 KRTAP20-1Q3LI63 56 aa4.64□□□□□ -1.67
DDX39A-213ENST00000590315 KRTAP23-1A1A580 65 aa4.62□□□□□ -1.67
DDX39A-213ENST00000590315 PP632Q6XCG6 107 aa4.59□□□□□ -1.67
DDX39A-213ENST00000590315 LCE5AQ5TCM9 118 aa4.58□□□□□ -1.68
DDX39A-213ENST00000590315 MT1LQ93083 61 aa4.58□□□□□ -1.68
DDX39A-213ENST00000590315 KRTAP2-3P0C7H8 128 aa4.57□□□□□ -1.68
DDX39A-213ENST00000590315 KRTAP2-4Q9BYR9 128 aa4.57□□□□□ -1.68
DDX39A-213ENST00000590315 MT1GP13640 62 aa4.56□□□□□ -1.68
DDX39A-213ENST00000590315 PMAIP1Q13794 54 aa4.56□□□□□ -1.68
DDX39A-213ENST00000590315 LCE3BQ5TA77 95 aa4.53□□□□□ -1.68
DDX39A-213ENST00000590315 MT1MQ8N339 61 aa4.51□□□□□ -1.69
DDX39A-213ENST00000590315 PRO0628Q9UI54 55 aa4.47□□□□□ -1.69
DDX39A-213ENST00000590315 KRTAP15-1Q3LI76 137 aa4.46□□□□□ -1.7
DDX39A-213ENST00000590315 KRTAP2-2Q9BYT5 123 aa4.44□□□□□ -1.7
DDX39A-213ENST00000590315 KRTAP2-1Q9BYU5 128 aa4.44□□□□□ -1.7
DDX39A-213ENST00000590315 KRTAP4-3Q9BYR4 195 aa4.41□□□□□ -1.7
DDX39A-213ENST00000590315 KRTAP4-7Q9BYR0 210 aa4.4□□□□□ -1.71
DDX39A-213ENST00000590315 DSTQ03001 7570 aaKnown RBP4.35□□□□□ -1.71
DDX39A-213ENST00000590315 KRTAP19-4Q3LI73 84 aa4.33□□□□□ -1.72
DDX39A-213ENST00000590315 PRAC1Q96KF2 57 aa4.33□□□□□ -1.72
DDX39A-213ENST00000590315 LCE3CQ5T5A8 94 aa4.31□□□□□ -1.72
DDX39A-213ENST00000590315 KTN1-AS1Q86SY8 53 aa4.23□□□□□ -1.73
DDX39A-213ENST00000590315 LOC100996750A0A140TA64 210 aa4.16□□□□□ -1.74
DDX39A-213ENST00000590315 KRTAP4-9Q9BYQ8 210 aa4.13□□□□□ -1.75
DDX39A-213ENST00000590315 LCE4AQ5TA78 99 aa4.12□□□□□ -1.75
DDX39A-213ENST00000590315 SVIPQ8NHG7 77 aa4.12□□□□□ -1.75
DDX39A-213ENST00000590315 MT4P47944 62 aa4.1□□□□□ -1.75
DDX39A-213ENST00000590315 LCE1DQ5T752 114 aa4.05□□□□□ -1.76
DDX39A-213ENST00000590315 KRTAP5-4Q6L8H1 288 aa4.05□□□□□ -1.76
DDX39A-213ENST00000590315 KRTAP5-5Q701N2 237 aaPredicted RBP4.04□□□□□ -1.76
DDX39A-213ENST00000590315 KRTAP9-6A8MVA2 160 aa4.02□□□□□ -1.77
DDX39A-213ENST00000590315 KRTAP4-6Q9BYQ5 205 aa3.95□□□□□ -1.78
DDX39A-213ENST00000590315 KRTAP12-4P60329 112 aa3.94□□□□□ -1.78
DDX39A-213ENST00000590315 MT1AP04731 61 aa3.92□□□□□ -1.78
DDX39A-213ENST00000590315 HMCN1Q96RW7 5635 aa3.91□□□□□ -1.78
DDX39A-213ENST00000590315 KRTAP6-1Q3LI64 71 aa3.88□□□□□ -1.79
DDX39A-213ENST00000590315 SYNE1Q8NF91 8797 aaKnown RBP3.86□□□□□ -1.79
DDX39A-213ENST00000590315 KRTAP20-2Q3LI61 65 aa3.85□□□□□ -1.79
DDX39A-213ENST00000590315 SPRR5A0A1B0GTR4 108 aa3.84□□□□□ -1.79
DDX39A-213ENST00000590315 KRTAP9-4Q9BYQ2 154 aa3.74□□□□□ -1.81
DDX39A-213ENST00000590315 AHNAK2Q8IVF2 5795 aa3.72□□□□□ -1.81
DDX39A-213ENST00000590315 KRTAP5-3Q6L8H2 238 aa3.68□□□□□ -1.82
DDX39A-213ENST00000590315 GPR98Q8WXG9 6306 aa3.67□□□□□ -1.82
DDX39A-213ENST00000590315 KRTAP6-2Q3LI66 62 aa3.65□□□□□ -1.83
DDX39A-213ENST00000590315 LUZP6Q538Z0 58 aa3.64□□□□□ -1.83
DDX39A-213ENST00000590315 KRTAP5-2Q701N4 177 aa3.6□□□□□ -1.83
DDX39A-213ENST00000590315 MT3P25713 68 aa3.57□□□□□ -1.84
DDX39A-213ENST00000590315 KRTAP5-10Q6L8G5 202 aa3.55□□□□□ -1.84
DDX39A-213ENST00000590315 KRTAP4-11Q9BYQ6 195 aa3.42□□□□□ -1.86
DDX39A-213ENST00000590315 KRTAP5-7Q6L8G8 165 aa3.37□□□□□ -1.87
DDX39A-213ENST00000590315 H3BS24 57 aa3.34□□□□□ -1.87
DDX39A-213ENST00000590315 OBSCNQ5VST9 7968 aa3.33□□□□□ -1.88
DDX39A-213ENST00000590315 KRTAP5-8O75690 187 aa3.29□□□□□ -1.88
DDX39A-213ENST00000590315 NDUFAF8A1L188 74 aa3.23□□□□□ -1.89
DDX39A-213ENST00000590315 LCE3DQ9BYE3 92 aa3.19□□□□□ -1.9
DDX39A-213ENST00000590315 KRTAP5-1Q6L8H4 278 aa3.17□□□□□ -1.9
DDX39A-213ENST00000590315 LCE1EQ5T753 118 aa3.15□□□□□ -1.91
DDX39A-213ENST00000590315 KRTAP9-9Q9BYP9 154 aa3.12□□□□□ -1.91
DDX39A-213ENST00000590315 MUC5ACP98088 5654 aa3.09□□□□□ -1.91
DDX39A-213ENST00000590315 LCE1BQ5T7P3 118 aa3.06□□□□□ -1.92
DDX39A-213ENST00000590315 LCE3EQ5T5B0 92 aa3.05□□□□□ -1.92
DDX39A-213ENST00000590315 KRTAP4-12Q9BQ66 201 aa2.96□□□□□ -1.94
DDX39A-213ENST00000590315 KRTAP4-2Q9BYR5 136 aa2.96□□□□□ -1.94
DDX39A-213ENST00000590315 MUC5BQ9HC84 5762 aaPredicted RBP2.95□□□□□ -1.94
DDX39A-213ENST00000590315 AHNAKQ09666 5890 aaKnown RBP2.95□□□□□ -1.94
DDX39A-213ENST00000590315 LCE1CQ5T751 118 aa2.92□□□□□ -1.94
DDX39A-213ENST00000590315 A0A0A0MQY5 61 aa2.75□□□□□ -1.97
DDX39A-213ENST00000590315 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.68□□□□□ -1.98
DDX39A-213ENST00000590315 KRTAP5-11Q6L8G4 156 aa2.63□□□□□ -1.99
DDX39A-213ENST00000590315 INE1O15225 51 aa2.61□□□□□ -1.99
DDX39A-213ENST00000590315 KRTAP21-2Q3LI59 83 aa2.51□□□□□ -2.01
DDX39A-213ENST00000590315 PRM1P04553 51 aa2.5□□□□□ -2.01
DDX39A-213ENST00000590315 LCE1FQ5T754 118 aa2.47□□□□□ -2.01
DDX39A-213ENST00000590315 KRTAP4-4Q9BYR3 166 aa2.34□□□□□ -2.03
DDX39A-213ENST00000590315 PHGR1C9JFL3 82 aa2.26□□□□□ -2.05
DDX39A-213ENST00000590315 MUC19Q7Z5P9 8384 aa2.05□□□□□ -2.08
DDX39A-213ENST00000590315 KRTAP21-1Q3LI58 79 aa1.57□□□□□ -2.16
DDX39A-213ENST00000590315 MUC16Q8WXI7 14507 aa1.48□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 12.1 ms