RNA–Protein interactions for RNA: ENST00000589863.5

SAFB-207, Transcript of scaffold attachment factor B, humanhuman

TSL 2

Gene SAFB, Length 2,708 nt, Biotype nonsense mediated decay, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB-207ENST00000589863 KRTAP2-1Q9BYU5 128 aa5.78□□□□□ -1.48
SAFB-207ENST00000589863 DSTQ03001 7570 aaKnown RBP5.72□□□□□ -1.49
SAFB-207ENST00000589863 KRTAP4-3Q9BYR4 195 aa5.67□□□□□ -1.5
SAFB-207ENST00000589863 LOC100996750A0A140TA64 210 aa5.65□□□□□ -1.51
SAFB-207ENST00000589863 KRTAP19-6Q3LI70 58 aa5.61□□□□□ -1.51
SAFB-207ENST00000589863 KRTAP19-4Q3LI73 84 aa5.59□□□□□ -1.51
SAFB-207ENST00000589863 MACF1Q9UPN3 7388 aaKnown RBP5.57□□□□□ -1.52
SAFB-207ENST00000589863 LCE2DQ5TA82 110 aaPredicted RBP5.56□□□□□ -1.52
SAFB-207ENST00000589863 MT1GP13640 62 aa5.54□□□□□ -1.52
SAFB-207ENST00000589863 SYNE2Q8WXH0 6885 aaKnown RBP5.52□□□□□ -1.53
SAFB-207ENST00000589863 CRCT1Q9UGL9 99 aa5.5□□□□□ -1.53
SAFB-207ENST00000589863 MDN1Q9NU22 5596 aa5.45□□□□□ -1.54
SAFB-207ENST00000589863 MT1MQ8N339 61 aa5.45□□□□□ -1.54
SAFB-207ENST00000589863 KRTAP19-3Q7Z4W3 81 aa5.42□□□□□ -1.54
SAFB-207ENST00000589863 KRTAP9-2Q9BYQ4 174 aa5.37□□□□□ -1.55
SAFB-207ENST00000589863 SPRR2FQ96RM1 72 aa5.26□□□□□ -1.57
SAFB-207ENST00000589863 SYNE1Q8NF91 8797 aaKnown RBP5.26□□□□□ -1.57
SAFB-207ENST00000589863 LCE5AQ5TCM9 118 aa5.23□□□□□ -1.57
SAFB-207ENST00000589863 KRTAP12-4P60329 112 aa5.2□□□□□ -1.58
SAFB-207ENST00000589863 LCE3BQ5TA77 95 aa5.16□□□□□ -1.58
SAFB-207ENST00000589863 KRTAP4-9Q9BYQ8 210 aa5.13□□□□□ -1.59
SAFB-207ENST00000589863 OBSCNQ5VST9 7968 aa5.04□□□□□ -1.6
SAFB-207ENST00000589863 KRTAP6-1Q3LI64 71 aa5.01□□□□□ -1.61
SAFB-207ENST00000589863 KRTAP9-6A0A140TA67 174 aa4.95□□□□□ -1.62
SAFB-207ENST00000589863 MT1AP04731 61 aa4.86□□□□□ -1.63
SAFB-207ENST00000589863 LCE1AQ5T7P2 110 aa4.85□□□□□ -1.63
SAFB-207ENST00000589863 LCE3DQ9BYE3 92 aa4.8□□□□□ -1.64
SAFB-207ENST00000589863 KRTAP5-5Q701N2 237 aaPredicted RBP4.78□□□□□ -1.64
SAFB-207ENST00000589863 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.76□□□□□ -1.65
SAFB-207ENST00000589863 SPRR2EP22531 72 aa4.76□□□□□ -1.65
SAFB-207ENST00000589863 SPRR2BP35325 72 aa4.76□□□□□ -1.65
SAFB-207ENST00000589863 SPRR2AP35326 72 aa4.76□□□□□ -1.65
SAFB-207ENST00000589863 KRTAP5-9P26371 169 aa4.73□□□□□ -1.65
SAFB-207ENST00000589863 KRTAP9-7A8MTY7 169 aa4.73□□□□□ -1.65
SAFB-207ENST00000589863 LCE3EQ5T5B0 92 aa4.73□□□□□ -1.65
SAFB-207ENST00000589863 KRTAP2-2Q9BYT5 123 aa4.67□□□□□ -1.66
SAFB-207ENST00000589863 PRM1P04553 51 aa4.62□□□□□ -1.67
SAFB-207ENST00000589863 KRTAP9-4Q9BYQ2 154 aa4.58□□□□□ -1.68
SAFB-207ENST00000589863 KRTAP6-3Q3LI67 103 aa4.55□□□□□ -1.68
SAFB-207ENST00000589863 SPRR2DP22532 72 aa4.52□□□□□ -1.69
SAFB-207ENST00000589863 KRTAP4-6Q9BYQ5 205 aa4.52□□□□□ -1.69
SAFB-207ENST00000589863 KRTAP6-2Q3LI66 62 aa4.48□□□□□ -1.69
SAFB-207ENST00000589863 NEBP20929 6669 aa4.36□□□□□ -1.71
SAFB-207ENST00000589863 MT3P25713 68 aa4.36□□□□□ -1.71
SAFB-207ENST00000589863 LCE1EQ5T753 118 aa4.21□□□□□ -1.74
SAFB-207ENST00000589863 MT4P47944 62 aa4.15□□□□□ -1.74
SAFB-207ENST00000589863 HMCN1Q96RW7 5635 aa4.14□□□□□ -1.75
SAFB-207ENST00000589863 KRTAP5-4Q6L8H1 288 aa4.12□□□□□ -1.75
SAFB-207ENST00000589863 LCE1FQ5T754 118 aa4.04□□□□□ -1.76
SAFB-207ENST00000589863 LCE1DQ5T752 114 aa4.04□□□□□ -1.76
SAFB-207ENST00000589863 KRTAP20-1Q3LI63 56 aa3.97□□□□□ -1.77
SAFB-207ENST00000589863 KRTAP20-2Q3LI61 65 aa3.93□□□□□ -1.78
SAFB-207ENST00000589863 KRTAP5-2Q701N4 177 aa3.87□□□□□ -1.79
SAFB-207ENST00000589863 MUC5ACP98088 5654 aa3.83□□□□□ -1.8
SAFB-207ENST00000589863 LCE4AQ5TA78 99 aa3.78□□□□□ -1.8
SAFB-207ENST00000589863 KRTAP5-3Q6L8H2 238 aa3.71□□□□□ -1.82
SAFB-207ENST00000589863 KRTAP9-9Q9BYP9 154 aa3.66□□□□□ -1.82
SAFB-207ENST00000589863 LCE1BQ5T7P3 118 aa3.62□□□□□ -1.83
SAFB-207ENST00000589863 KRTAP4-12Q9BQ66 201 aa3.59□□□□□ -1.83
SAFB-207ENST00000589863 KRTAP4-11Q9BYQ6 195 aa3.52□□□□□ -1.85
SAFB-207ENST00000589863 KRTAP5-10Q6L8G5 202 aa3.51□□□□□ -1.85
SAFB-207ENST00000589863 KRTAP4-2Q9BYR5 136 aa3.47□□□□□ -1.85
SAFB-207ENST00000589863 KRTAP5-1Q6L8H4 278 aa3.41□□□□□ -1.86
SAFB-207ENST00000589863 AHNAK2Q8IVF2 5795 aa3.37□□□□□ -1.87
SAFB-207ENST00000589863 LCE1CQ5T751 118 aa3.32□□□□□ -1.88
SAFB-207ENST00000589863 MUC5BQ9HC84 5762 aaPredicted RBP3.24□□□□□ -1.89
SAFB-207ENST00000589863 KRTAP21-2Q3LI59 83 aa3.21□□□□□ -1.9
SAFB-207ENST00000589863 MUC19Q7Z5P9 8384 aa3.14□□□□□ -1.91
SAFB-207ENST00000589863 KRTAP5-8O75690 187 aa3.12□□□□□ -1.91
SAFB-207ENST00000589863 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.11□□□□□ -1.91
SAFB-207ENST00000589863 KRTAP4-4Q9BYR3 166 aa3.06□□□□□ -1.92
SAFB-207ENST00000589863 GPR98Q8WXG9 6306 aa2.95□□□□□ -1.94
SAFB-207ENST00000589863 KRTAP5-7Q6L8G8 165 aa2.94□□□□□ -1.94
SAFB-207ENST00000589863 KRTAP21-1Q3LI58 79 aa2.84□□□□□ -1.95
SAFB-207ENST00000589863 KRTAP5-11Q6L8G4 156 aa2.84□□□□□ -1.96
SAFB-207ENST00000589863 PHGR1C9JFL3 82 aa2.48□□□□□ -2.01
SAFB-207ENST00000589863 AHNAKQ09666 5890 aaKnown RBP2.42□□□□□ -2.02
SAFB-207ENST00000589863 MUC16Q8WXI7 14507 aa1.69□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 7.7 ms