RNA–Protein interactions for RNA: ENST00000589828.1

VAT1-207, Transcript of vesicle amine transport 1, humanhuman

TSL 2

Gene VAT1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-207ENST00000589828 NDUFAF8A1L188 74 aa3.34□□□□□ -1.87
VAT1-207ENST00000589828 SPATA8Q6RVD6 105 aa3.34□□□□□ -1.87
VAT1-207ENST00000589828 MRPL34Q9BQ48 92 aaKnown RBP3.34□□□□□ -1.87
VAT1-207ENST00000589828 S4R3F8 94 aa3.33□□□□□ -1.88
VAT1-207ENST00000589828 MT3P25713 68 aa3.3□□□□□ -1.88
VAT1-207ENST00000589828 KRTAP12-2P59991 146 aa3.3□□□□□ -1.88
VAT1-207ENST00000589828 COA5Q86WW8 74 aa3.28□□□□□ -1.88
VAT1-207ENST00000589828 PRO2289Q9P1D8 64 aa3.28□□□□□ -1.88
VAT1-207ENST00000589828 CRIPTQ9P021 101 aa3.27□□□□□ -1.89
VAT1-207ENST00000589828 A0A1B0GU33 70 aa3.26□□□□□ -1.89
VAT1-207ENST00000589828 K7EQZ3 153 aa3.25□□□□□ -1.89
VAT1-207ENST00000589828 SPINT4Q6UDR6 99 aa3.24□□□□□ -1.89
VAT1-207ENST00000589828 KRTAP10-7P60409 375 aaPredicted RBP3.2□□□□□ -1.9
VAT1-207ENST00000589828 DSTQ03001 7570 aaKnown RBP3.2□□□□□ -1.9
VAT1-207ENST00000589828 A0A1B0GU69 56 aa3.19□□□□□ -1.9
VAT1-207ENST00000589828 PLAC4Q8WY50 150 aa3.16□□□□□ -1.9
VAT1-207ENST00000589828 HMCN1Q96RW7 5635 aa3.15□□□□□ -1.9
VAT1-207ENST00000589828 KRTAP10-12P60413 245 aa3.15□□□□□ -1.91
VAT1-207ENST00000589828 Q8N9L7 120 aa3.15□□□□□ -1.91
VAT1-207ENST00000589828 H0YAA0 97 aa3.13□□□□□ -1.91
VAT1-207ENST00000589828 KRTAP5-10Q6L8G5 202 aa3.13□□□□□ -1.91
VAT1-207ENST00000589828 AHNAK2Q8IVF2 5795 aa3.13□□□□□ -1.91
VAT1-207ENST00000589828 ACYP2P14621 99 aa3.09□□□□□ -1.91
VAT1-207ENST00000589828 MT4P47944 62 aa3.08□□□□□ -1.92
VAT1-207ENST00000589828 R4GN34 69 aa3.06□□□□□ -1.92
VAT1-207ENST00000589828 KRTAP5-7Q6L8G8 165 aa3.05□□□□□ -1.92
VAT1-207ENST00000589828 TP53AIP1Q9HCN2 124 aa3.05□□□□□ -1.92
VAT1-207ENST00000589828 KRTAP19-3Q7Z4W3 81 aa3.02□□□□□ -1.93
VAT1-207ENST00000589828 KRTAP19-7Q3SYF9 63 aa3.01□□□□□ -1.93
VAT1-207ENST00000589828 M0QZ58 72 aa3□□□□□ -1.93
VAT1-207ENST00000589828 LCE1FQ5T754 118 aa3□□□□□ -1.93
VAT1-207ENST00000589828 MT1EP04732 61 aa2.99□□□□□ -1.93
VAT1-207ENST00000589828 LCE1EQ5T753 118 aa2.98□□□□□ -1.93
VAT1-207ENST00000589828 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.97□□□□□ -1.93
VAT1-207ENST00000589828 INE1O15225 51 aa2.95□□□□□ -1.94
VAT1-207ENST00000589828 KRTAP5-4Q6L8H1 288 aa2.95□□□□□ -1.94
VAT1-207ENST00000589828 KRTAP5-11Q6L8G4 156 aa2.94□□□□□ -1.94
VAT1-207ENST00000589828 SPRR5A0A1B0GTR4 108 aa2.93□□□□□ -1.94
VAT1-207ENST00000589828 MT1GP13640 62 aa2.88□□□□□ -1.95
VAT1-207ENST00000589828 MT1MQ8N339 61 aa2.87□□□□□ -1.95
VAT1-207ENST00000589828 KRTAP4-3Q9BYR4 195 aa2.85□□□□□ -1.95
VAT1-207ENST00000589828 LCE3CQ5T5A8 94 aa2.83□□□□□ -1.96
VAT1-207ENST00000589828 KRTAP19-5Q3LI72 72 aa2.82□□□□□ -1.96
VAT1-207ENST00000589828 PP632Q6XCG6 107 aa2.82□□□□□ -1.96
VAT1-207ENST00000589828 KRTAP20-2Q3LI61 65 aa2.8□□□□□ -1.96
VAT1-207ENST00000589828 MT1LQ93083 61 aa2.8□□□□□ -1.96
VAT1-207ENST00000589828 A0A0D9SG42 100 aa2.72□□□□□ -1.97
VAT1-207ENST00000589828 KRTAP9-6A8MVA2 160 aa2.7□□□□□ -1.98
VAT1-207ENST00000589828 KRTAP13-4Q3LI77 160 aa2.69□□□□□ -1.98
VAT1-207ENST00000589828 KRTAP5-5Q701N2 237 aaPredicted RBP2.67□□□□□ -1.98
VAT1-207ENST00000589828 AHNAKQ09666 5890 aaKnown RBP2.65□□□□□ -1.98
VAT1-207ENST00000589828 KRTAP12-4P60329 112 aa2.64□□□□□ -1.99
VAT1-207ENST00000589828 C10orf95Q9H7T3 257 aa2.63□□□□□ -1.99
VAT1-207ENST00000589828 MUC5BQ9HC84 5762 aaPredicted RBP2.62□□□□□ -1.99
VAT1-207ENST00000589828 SYNE1Q8NF91 8797 aaKnown RBP2.62□□□□□ -1.99
VAT1-207ENST00000589828 MUC5ACP98088 5654 aa2.62□□□□□ -1.99
VAT1-207ENST00000589828 KRTAP5-8O75690 187 aa2.59□□□□□ -1.99
VAT1-207ENST00000589828 LCE3EQ5T5B0 92 aa2.58□□□□□ -2
VAT1-207ENST00000589828 LCE3AQ5TA76 89 aa2.58□□□□□ -2
VAT1-207ENST00000589828 KRTAP5-2Q701N4 177 aa2.52□□□□□ -2.01
VAT1-207ENST00000589828 KRTAP5-1Q6L8H4 278 aa2.51□□□□□ -2.01
VAT1-207ENST00000589828 KRTAP12-1P59990 96 aa2.48□□□□□ -2.01
VAT1-207ENST00000589828 KRTAP4-4Q9BYR3 166 aa2.48□□□□□ -2.01
VAT1-207ENST00000589828 KRTAP12-3P60328 96 aa2.45□□□□□ -2.02
VAT1-207ENST00000589828 TNP1P09430 55 aa2.4□□□□□ -2.03
VAT1-207ENST00000589828 KRTAP6-1Q3LI64 71 aa2.4□□□□□ -2.03
VAT1-207ENST00000589828 MT1AP04731 61 aa2.36□□□□□ -2.03
VAT1-207ENST00000589828 KRTAP6-2Q3LI66 62 aa2.34□□□□□ -2.03
VAT1-207ENST00000589828 OBSCNQ5VST9 7968 aa2.32□□□□□ -2.04
VAT1-207ENST00000589828 LCE3DQ9BYE3 92 aa2.12□□□□□ -2.07
VAT1-207ENST00000589828 LCE1BQ5T7P3 118 aa2□□□□□ -2.09
VAT1-207ENST00000589828 LCE1CQ5T751 118 aa1.98□□□□□ -2.09
VAT1-207ENST00000589828 PHGR1C9JFL3 82 aa1.82□□□□□ -2.12
VAT1-207ENST00000589828 KRTAP21-2Q3LI59 83 aa1.58□□□□□ -2.16
VAT1-207ENST00000589828 PRM1P04553 51 aa1.55□□□□□ -2.16
VAT1-207ENST00000589828 MUC19Q7Z5P9 8384 aa1.54□□□□□ -2.16
VAT1-207ENST00000589828 KRTAP21-1Q3LI58 79 aa1.38□□□□□ -2.19
VAT1-207ENST00000589828 MUC16Q8WXI7 14507 aa1.12□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 49.7 ms