RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 SPRR5A0A1B0GTR4 108 aa3.96□□□□□ -1.78
VPS25-203ENST00000589520 H3BS24 57 aa3.93□□□□□ -1.78
VPS25-203ENST00000589520 KRTAP19-4Q3LI73 84 aa3.92□□□□□ -1.78
VPS25-203ENST00000589520 NDUFAF8A1L188 74 aa3.9□□□□□ -1.79
VPS25-203ENST00000589520 KRTAP19-5Q3LI72 72 aa3.87□□□□□ -1.79
VPS25-203ENST00000589520 KRTAP2-2Q9BYT5 123 aa3.85□□□□□ -1.79
VPS25-203ENST00000589520 KRTAP2-1Q9BYU5 128 aa3.85□□□□□ -1.79
VPS25-203ENST00000589520 KRTAP4-8A0A0G2JLE6 195 aa3.82□□□□□ -1.8
VPS25-203ENST00000589520 KRTAP4-8Q9BYQ9 185 aa3.82□□□□□ -1.8
VPS25-203ENST00000589520 KRTAP5-9P26371 169 aa3.79□□□□□ -1.8
VPS25-203ENST00000589520 KRTAP19-7Q3SYF9 63 aa3.77□□□□□ -1.81
VPS25-203ENST00000589520 LCE3CQ5T5A8 94 aa3.75□□□□□ -1.81
VPS25-203ENST00000589520 MT1EP04732 61 aa3.72□□□□□ -1.81
VPS25-203ENST00000589520 SPRR2EP22531 72 aa3.7□□□□□ -1.82
VPS25-203ENST00000589520 SPRR2BP35325 72 aa3.7□□□□□ -1.82
VPS25-203ENST00000589520 SPRR2AP35326 72 aa3.7□□□□□ -1.82
VPS25-203ENST00000589520 MT1LQ93083 61 aa3.67□□□□□ -1.82
VPS25-203ENST00000589520 A0A0A0MQY5 61 aa3.6□□□□□ -1.83
VPS25-203ENST00000589520 MT1GP13640 62 aa3.59□□□□□ -1.83
VPS25-203ENST00000589520 SPRR2DP22532 72 aa3.59□□□□□ -1.83
VPS25-203ENST00000589520 SPRR2FQ96RM1 72 aa3.57□□□□□ -1.84
VPS25-203ENST00000589520 KRTAP4-9Q9BYQ8 210 aa3.57□□□□□ -1.84
VPS25-203ENST00000589520 AHNAK2Q8IVF2 5795 aa3.56□□□□□ -1.84
VPS25-203ENST00000589520 KRTAP19-3Q7Z4W3 81 aa3.56□□□□□ -1.84
VPS25-203ENST00000589520 LCE3BQ5TA77 95 aa3.54□□□□□ -1.84
VPS25-203ENST00000589520 LCE1AQ5T7P2 110 aa3.53□□□□□ -1.84
VPS25-203ENST00000589520 DSTQ03001 7570 aaKnown RBP3.52□□□□□ -1.85
VPS25-203ENST00000589520 MT1MQ8N339 61 aa3.49□□□□□ -1.85
VPS25-203ENST00000589520 KRTAP4-7Q9BYR0 210 aa3.48□□□□□ -1.85
VPS25-203ENST00000589520 LCE5AQ5TCM9 118 aa3.47□□□□□ -1.85
VPS25-203ENST00000589520 KRTAP5-10Q6L8G5 202 aa3.47□□□□□ -1.85
VPS25-203ENST00000589520 HMCN1Q96RW7 5635 aa3.47□□□□□ -1.85
VPS25-203ENST00000589520 KRTAP9-6A8MVA2 160 aa3.46□□□□□ -1.86
VPS25-203ENST00000589520 KRTAP5-7Q6L8G8 165 aa3.41□□□□□ -1.86
VPS25-203ENST00000589520 INE1O15225 51 aa3.35□□□□□ -1.87
VPS25-203ENST00000589520 LCE1DQ5T752 114 aa3.35□□□□□ -1.87
VPS25-203ENST00000589520 KRTAP4-3Q9BYR4 195 aa3.33□□□□□ -1.88
VPS25-203ENST00000589520 LOC100996750A0A140TA64 210 aa3.27□□□□□ -1.89
VPS25-203ENST00000589520 MT4P47944 62 aa3.23□□□□□ -1.89
VPS25-203ENST00000589520 KRTAP5-3Q6L8H2 238 aa3.21□□□□□ -1.9
VPS25-203ENST00000589520 AHNAKQ09666 5890 aaKnown RBP3.2□□□□□ -1.9
VPS25-203ENST00000589520 MT1AP04731 61 aa3.15□□□□□ -1.91
VPS25-203ENST00000589520 KRTAP5-5Q701N2 237 aaPredicted RBP3.13□□□□□ -1.91
VPS25-203ENST00000589520 MUC5ACP98088 5654 aa3.06□□□□□ -1.92
VPS25-203ENST00000589520 KRTAP6-1Q3LI64 71 aa3.06□□□□□ -1.92
VPS25-203ENST00000589520 KRTAP4-6Q9BYQ5 205 aa3.05□□□□□ -1.92
VPS25-203ENST00000589520 MUC5BQ9HC84 5762 aaPredicted RBP3.04□□□□□ -1.92
VPS25-203ENST00000589520 LCE4AQ5TA78 99 aa3.04□□□□□ -1.92
VPS25-203ENST00000589520 KRTAP9-4Q9BYQ2 154 aa2.99□□□□□ -1.93
VPS25-203ENST00000589520 KRTAP12-4P60329 112 aa2.93□□□□□ -1.94
VPS25-203ENST00000589520 KRTAP5-4Q6L8H1 288 aa2.93□□□□□ -1.94
VPS25-203ENST00000589520 SYNE1Q8NF91 8797 aaKnown RBP2.92□□□□□ -1.94
VPS25-203ENST00000589520 MT3P25713 68 aa2.88□□□□□ -1.95
VPS25-203ENST00000589520 KRTAP9-9Q9BYP9 154 aa2.88□□□□□ -1.95
VPS25-203ENST00000589520 KRTAP4-12Q9BQ66 201 aa2.86□□□□□ -1.95
VPS25-203ENST00000589520 LCE3DQ9BYE3 92 aa2.86□□□□□ -1.95
VPS25-203ENST00000589520 LCE3EQ5T5B0 92 aa2.82□□□□□ -1.96
VPS25-203ENST00000589520 KRTAP20-2Q3LI61 65 aa2.8□□□□□ -1.96
VPS25-203ENST00000589520 KRTAP6-2Q3LI66 62 aa2.79□□□□□ -1.96
VPS25-203ENST00000589520 KRTAP5-8O75690 187 aa2.76□□□□□ -1.97
VPS25-203ENST00000589520 KRTAP4-11Q9BYQ6 195 aa2.72□□□□□ -1.97
VPS25-203ENST00000589520 KRTAP5-2Q701N4 177 aa2.68□□□□□ -1.98
VPS25-203ENST00000589520 PRM1P04553 51 aa2.48□□□□□ -2.01
VPS25-203ENST00000589520 LCE1EQ5T753 118 aa2.48□□□□□ -2.01
VPS25-203ENST00000589520 OBSCNQ5VST9 7968 aa2.47□□□□□ -2.01
VPS25-203ENST00000589520 LCE1CQ5T751 118 aa2.29□□□□□ -2.04
VPS25-203ENST00000589520 LCE1BQ5T7P3 118 aa2.29□□□□□ -2.04
VPS25-203ENST00000589520 KRTAP5-1Q6L8H4 278 aa2.29□□□□□ -2.04
VPS25-203ENST00000589520 KRTAP4-2Q9BYR5 136 aa2.28□□□□□ -2.04
VPS25-203ENST00000589520 LCE1FQ5T754 118 aa2.22□□□□□ -2.05
VPS25-203ENST00000589520 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.17□□□□□ -2.06
VPS25-203ENST00000589520 PHGR1C9JFL3 82 aa2.08□□□□□ -2.08
VPS25-203ENST00000589520 KRTAP21-2Q3LI59 83 aa2.02□□□□□ -2.09
VPS25-203ENST00000589520 KRTAP5-11Q6L8G4 156 aa1.99□□□□□ -2.09
VPS25-203ENST00000589520 KRTAP4-4Q9BYR3 166 aa1.7□□□□□ -2.14
VPS25-203ENST00000589520 KRTAP21-1Q3LI58 79 aa1.58□□□□□ -2.16
VPS25-203ENST00000589520 MUC19Q7Z5P9 8384 aa1.57□□□□□ -2.16
VPS25-203ENST00000589520 MUC16Q8WXI7 14507 aa1.16□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 83.5 ms