RNA–Protein interactions for RNA: ENST00000589493.1

BECN1-210, Transcript of beclin 1, humanhuman

TSL 2

Gene BECN1, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BECN1-210ENST00000589493 SSPOA2VEC9 5147 aa3.58□□□□□ -1.84
BECN1-210ENST00000589493 SPINT4Q6UDR6 99 aa3.58□□□□□ -1.84
BECN1-210ENST00000589493 PLAC4Q8WY50 150 aa3.57□□□□□ -1.84
BECN1-210ENST00000589493 LCE1FQ5T754 118 aa3.55□□□□□ -1.84
BECN1-210ENST00000589493 KRTAP10-12P60413 245 aa3.53□□□□□ -1.84
BECN1-210ENST00000589493 KRTAP19-6Q3LI70 58 aa3.52□□□□□ -1.85
BECN1-210ENST00000589493 KRTAP5-1Q6L8H4 278 aa3.51□□□□□ -1.85
BECN1-210ENST00000589493 MT1XP80297 61 aa3.5□□□□□ -1.85
BECN1-210ENST00000589493 KRTAP9-6A8MVA2 160 aa3.49□□□□□ -1.85
BECN1-210ENST00000589493 C10orf95Q9H7T3 257 aa3.47□□□□□ -1.85
BECN1-210ENST00000589493 PRO2289Q9P1D8 64 aa3.47□□□□□ -1.85
BECN1-210ENST00000589493 FCGBPQ9Y6R7 5405 aaPredicted RBP3.4□□□□□ -1.86
BECN1-210ENST00000589493 KRTAP25-1Q3LHN0 102 aa3.36□□□□□ -1.87
BECN1-210ENST00000589493 TNP1P09430 55 aa3.35□□□□□ -1.87
BECN1-210ENST00000589493 LCE3CQ5T5A8 94 aa3.35□□□□□ -1.87
BECN1-210ENST00000589493 KRTAP5-4Q6L8H1 288 aa3.35□□□□□ -1.87
BECN1-210ENST00000589493 KRTAP4-4Q9BYR3 166 aa3.35□□□□□ -1.87
BECN1-210ENST00000589493 MACF1Q9UPN3 7388 aaKnown RBP3.28□□□□□ -1.88
BECN1-210ENST00000589493 KRTAP5-9P26371 169 aa3.27□□□□□ -1.89
BECN1-210ENST00000589493 KRTAP6-3Q3LI67 103 aa3.25□□□□□ -1.89
BECN1-210ENST00000589493 KMT2DO14686 5537 aa3.25□□□□□ -1.89
BECN1-210ENST00000589493 PP632Q6XCG6 107 aa3.23□□□□□ -1.89
BECN1-210ENST00000589493 LCE3AQ5TA76 89 aa3.22□□□□□ -1.89
BECN1-210ENST00000589493 KRTAP8-1Q8IUC2 63 aa3.21□□□□□ -1.9
BECN1-210ENST00000589493 SYNE2Q8WXH0 6885 aaKnown RBP3.2□□□□□ -1.9
BECN1-210ENST00000589493 KRTAP19-7Q3SYF9 63 aa3.14□□□□□ -1.91
BECN1-210ENST00000589493 KRTAP19-5Q3LI72 72 aa3.12□□□□□ -1.91
BECN1-210ENST00000589493 KRTAP12-3P60328 96 aa3.1□□□□□ -1.91
BECN1-210ENST00000589493 SPRR2FQ96RM1 72 aa3.1□□□□□ -1.91
BECN1-210ENST00000589493 MT1EP04732 61 aa3.07□□□□□ -1.92
BECN1-210ENST00000589493 LCE3EQ5T5B0 92 aa3.06□□□□□ -1.92
BECN1-210ENST00000589493 MUC12Q9UKN1 5478 aa3.06□□□□□ -1.92
BECN1-210ENST00000589493 OBSCNQ5VST9 7968 aa3.03□□□□□ -1.92
BECN1-210ENST00000589493 SPRR2EP22531 72 aa3.02□□□□□ -1.93
BECN1-210ENST00000589493 SPRR2BP35325 72 aa3.02□□□□□ -1.93
BECN1-210ENST00000589493 SPRR2AP35326 72 aa3.02□□□□□ -1.93
BECN1-210ENST00000589493 MDN1Q9NU22 5596 aa3.01□□□□□ -1.93
BECN1-210ENST00000589493 INE1O15225 51 aa3□□□□□ -1.93
BECN1-210ENST00000589493 MT1LQ93083 61 aa3□□□□□ -1.93
BECN1-210ENST00000589493 NEBP20929 6669 aa2.99□□□□□ -1.93
BECN1-210ENST00000589493 KRTAP4-3Q9BYR4 195 aa2.99□□□□□ -1.93
BECN1-210ENST00000589493 MT1GP13640 62 aa2.96□□□□□ -1.94
BECN1-210ENST00000589493 KRTAP19-3Q7Z4W3 81 aa2.96□□□□□ -1.94
BECN1-210ENST00000589493 KRTAP20-1Q3LI63 56 aa2.94□□□□□ -1.94
BECN1-210ENST00000589493 SPRR2DP22532 72 aa2.93□□□□□ -1.94
BECN1-210ENST00000589493 KRTAP2-3P0C7H8 128 aa2.92□□□□□ -1.94
BECN1-210ENST00000589493 KRTAP2-4Q9BYR9 128 aa2.92□□□□□ -1.94
BECN1-210ENST00000589493 MT1MQ8N339 61 aa2.89□□□□□ -1.95
BECN1-210ENST00000589493 SPRR5A0A1B0GTR4 108 aa2.87□□□□□ -1.95
BECN1-210ENST00000589493 KRTAP2-1Q9BYU5 128 aa2.84□□□□□ -1.95
BECN1-210ENST00000589493 KRTAP5-2Q701N4 177 aa2.77□□□□□ -1.97
BECN1-210ENST00000589493 KRTAP5-5Q701N2 237 aaPredicted RBP2.74□□□□□ -1.97
BECN1-210ENST00000589493 DSTQ03001 7570 aaKnown RBP2.73□□□□□ -1.97
BECN1-210ENST00000589493 LCE1CQ5T751 118 aa2.57□□□□□ -2
BECN1-210ENST00000589493 LCE1BQ5T7P3 118 aa2.57□□□□□ -2
BECN1-210ENST00000589493 MT1AP04731 61 aa2.56□□□□□ -2
BECN1-210ENST00000589493 SYNE1Q8NF91 8797 aaKnown RBP2.56□□□□□ -2
BECN1-210ENST00000589493 KRTAP12-4P60329 112 aa2.51□□□□□ -2.01
BECN1-210ENST00000589493 KRTAP6-1Q3LI64 71 aa2.51□□□□□ -2.01
BECN1-210ENST00000589493 MT4P47944 62 aa2.5□□□□□ -2.01
BECN1-210ENST00000589493 HMCN1Q96RW7 5635 aa2.45□□□□□ -2.02
BECN1-210ENST00000589493 LCE3DQ9BYE3 92 aa2.42□□□□□ -2.02
BECN1-210ENST00000589493 KRTAP20-2Q3LI61 65 aa2.4□□□□□ -2.03
BECN1-210ENST00000589493 KRTAP6-2Q3LI66 62 aa2.32□□□□□ -2.04
BECN1-210ENST00000589493 GPR98Q8WXG9 6306 aa2.31□□□□□ -2.04
BECN1-210ENST00000589493 KRTAP5-8O75690 187 aa2.27□□□□□ -2.05
BECN1-210ENST00000589493 KRTAP5-10Q6L8G5 202 aa2.25□□□□□ -2.05
BECN1-210ENST00000589493 AHNAK2Q8IVF2 5795 aa2.22□□□□□ -2.05
BECN1-210ENST00000589493 KRTAP5-7Q6L8G8 165 aa2.18□□□□□ -2.06
BECN1-210ENST00000589493 MUC19Q7Z5P9 8384 aa2.09□□□□□ -2.07
BECN1-210ENST00000589493 MUC5ACP98088 5654 aa2.01□□□□□ -2.09
BECN1-210ENST00000589493 KRTAP21-2Q3LI59 83 aa1.86□□□□□ -2.11
BECN1-210ENST00000589493 AHNAKQ09666 5890 aaKnown RBP1.81□□□□□ -2.12
BECN1-210ENST00000589493 MUC5BQ9HC84 5762 aaPredicted RBP1.81□□□□□ -2.12
BECN1-210ENST00000589493 PRM1P04553 51 aa1.76□□□□□ -2.13
BECN1-210ENST00000589493 PHGR1C9JFL3 82 aa1.45□□□□□ -2.18
BECN1-210ENST00000589493 KRTAP21-1Q3LI58 79 aa1.12□□□□□ -2.23
BECN1-210ENST00000589493 MUC16Q8WXI7 14507 aa0.97□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 10.4 ms