RNA–Protein interactions for RNA: ENST00000589353.5

RANBP3-216, Transcript of RAN binding protein 3, humanhuman

TSL 5

Gene RANBP3, Length 490 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-216ENST00000589353 SYNE2Q8WXH0 6885 aaKnown RBP3.73□□□□□ -1.81
RANBP3-216ENST00000589353 KRTAP15-1Q3LI76 137 aa3.72□□□□□ -1.81
RANBP3-216ENST00000589353 LCE4AQ5TA78 99 aa3.72□□□□□ -1.81
RANBP3-216ENST00000589353 MACF1Q9UPN3 7388 aaKnown RBP3.7□□□□□ -1.82
RANBP3-216ENST00000589353 KRTAP19-4Q3LI73 84 aa3.68□□□□□ -1.82
RANBP3-216ENST00000589353 KRTAP19-7Q3SYF9 63 aa3.66□□□□□ -1.82
RANBP3-216ENST00000589353 MT1EP04732 61 aa3.63□□□□□ -1.83
RANBP3-216ENST00000589353 KRTAP4-11Q9BYQ6 195 aa3.63□□□□□ -1.83
RANBP3-216ENST00000589353 SPRR2FQ96RM1 72 aa3.59□□□□□ -1.83
RANBP3-216ENST00000589353 KRTAP6-3Q3LI67 103 aa3.58□□□□□ -1.84
RANBP3-216ENST00000589353 LCE5AQ5TCM9 118 aa3.57□□□□□ -1.84
RANBP3-216ENST00000589353 MT1LQ93083 61 aa3.56□□□□□ -1.84
RANBP3-216ENST00000589353 KMT2DO14686 5537 aa3.55□□□□□ -1.84
RANBP3-216ENST00000589353 KRTAP5-9P26371 169 aa3.55□□□□□ -1.84
RANBP3-216ENST00000589353 NEBP20929 6669 aa3.54□□□□□ -1.84
RANBP3-216ENST00000589353 LCE3CQ5T5A8 94 aa3.53□□□□□ -1.84
RANBP3-216ENST00000589353 H3BS24 57 aa3.52□□□□□ -1.85
RANBP3-216ENST00000589353 MT1GP13640 62 aa3.52□□□□□ -1.85
RANBP3-216ENST00000589353 KRTAP19-3Q7Z4W3 81 aa3.52□□□□□ -1.85
RANBP3-216ENST00000589353 MUC12Q9UKN1 5478 aa3.51□□□□□ -1.85
RANBP3-216ENST00000589353 SPRR5A0A1B0GTR4 108 aa3.5□□□□□ -1.85
RANBP3-216ENST00000589353 LUZP6Q538Z0 58 aa3.5□□□□□ -1.85
RANBP3-216ENST00000589353 KRTAP20-1Q3LI63 56 aa3.47□□□□□ -1.85
RANBP3-216ENST00000589353 KRTAP5-3Q6L8H2 238 aa3.44□□□□□ -1.86
RANBP3-216ENST00000589353 MDN1Q9NU22 5596 aa3.43□□□□□ -1.86
RANBP3-216ENST00000589353 SPRR2EP22531 72 aa3.43□□□□□ -1.86
RANBP3-216ENST00000589353 SPRR2BP35325 72 aa3.43□□□□□ -1.86
RANBP3-216ENST00000589353 SPRR2AP35326 72 aa3.43□□□□□ -1.86
RANBP3-216ENST00000589353 MT1MQ8N339 61 aa3.42□□□□□ -1.86
RANBP3-216ENST00000589353 LCE1AQ5T7P2 110 aa3.41□□□□□ -1.86
RANBP3-216ENST00000589353 SPRR2DP22532 72 aa3.32□□□□□ -1.88
RANBP3-216ENST00000589353 NDUFAF8A1L188 74 aa3.29□□□□□ -1.88
RANBP3-216ENST00000589353 KRTAP2-3P0C7H8 128 aa3.29□□□□□ -1.88
RANBP3-216ENST00000589353 KRTAP4-3Q9BYR4 195 aa3.29□□□□□ -1.88
RANBP3-216ENST00000589353 KRTAP2-4Q9BYR9 128 aa3.29□□□□□ -1.88
RANBP3-216ENST00000589353 KRTAP9-6A8MVA2 160 aa3.24□□□□□ -1.89
RANBP3-216ENST00000589353 GPR98Q8WXG9 6306 aa3.18□□□□□ -1.9
RANBP3-216ENST00000589353 KRTAP2-2Q9BYT5 123 aa3.16□□□□□ -1.9
RANBP3-216ENST00000589353 KRTAP2-1Q9BYU5 128 aa3.16□□□□□ -1.9
RANBP3-216ENST00000589353 KRTAP5-5Q701N2 237 aaPredicted RBP3.06□□□□□ -1.92
RANBP3-216ENST00000589353 MT1AP04731 61 aa3.05□□□□□ -1.92
RANBP3-216ENST00000589353 DSTQ03001 7570 aaKnown RBP3.05□□□□□ -1.92
RANBP3-216ENST00000589353 A0A0A0MQY5 61 aa3□□□□□ -1.93
RANBP3-216ENST00000589353 KRTAP6-1Q3LI64 71 aa2.98□□□□□ -1.93
RANBP3-216ENST00000589353 KRTAP5-4Q6L8H1 288 aa2.96□□□□□ -1.94
RANBP3-216ENST00000589353 KRTAP12-4P60329 112 aa2.95□□□□□ -1.94
RANBP3-216ENST00000589353 HMCN1Q96RW7 5635 aa2.86□□□□□ -1.95
RANBP3-216ENST00000589353 MT4P47944 62 aa2.83□□□□□ -1.96
RANBP3-216ENST00000589353 AHNAK2Q8IVF2 5795 aa2.82□□□□□ -1.96
RANBP3-216ENST00000589353 INE1O15225 51 aa2.8□□□□□ -1.96
RANBP3-216ENST00000589353 MT3P25713 68 aa2.8□□□□□ -1.96
RANBP3-216ENST00000589353 SYNE1Q8NF91 8797 aaKnown RBP2.78□□□□□ -1.96
RANBP3-216ENST00000589353 KRTAP20-2Q3LI61 65 aa2.77□□□□□ -1.97
RANBP3-216ENST00000589353 KRTAP6-2Q3LI66 62 aa2.75□□□□□ -1.97
RANBP3-216ENST00000589353 KRTAP5-10Q6L8G5 202 aa2.74□□□□□ -1.97
RANBP3-216ENST00000589353 KRTAP5-2Q701N4 177 aa2.67□□□□□ -1.98
RANBP3-216ENST00000589353 LCE3DQ9BYE3 92 aa2.67□□□□□ -1.98
RANBP3-216ENST00000589353 KRTAP5-7Q6L8G8 165 aa2.66□□□□□ -1.98
RANBP3-216ENST00000589353 LCE3EQ5T5B0 92 aa2.6□□□□□ -1.99
RANBP3-216ENST00000589353 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.54□□□□□ -2
RANBP3-216ENST00000589353 KRTAP5-11Q6L8G4 156 aa2.47□□□□□ -2.01
RANBP3-216ENST00000589353 OBSCNQ5VST9 7968 aa2.46□□□□□ -2.02
RANBP3-216ENST00000589353 AHNAKQ09666 5890 aaKnown RBP2.45□□□□□ -2.02
RANBP3-216ENST00000589353 LCE1EQ5T753 118 aa2.43□□□□□ -2.02
RANBP3-216ENST00000589353 MUC5BQ9HC84 5762 aaPredicted RBP2.4□□□□□ -2.03
RANBP3-216ENST00000589353 MUC5ACP98088 5654 aa2.37□□□□□ -2.03
RANBP3-216ENST00000589353 KRTAP5-1Q6L8H4 278 aa2.3□□□□□ -2.04
RANBP3-216ENST00000589353 KRTAP5-8O75690 187 aa2.29□□□□□ -2.04
RANBP3-216ENST00000589353 LCE1CQ5T751 118 aa2.25□□□□□ -2.05
RANBP3-216ENST00000589353 LCE1BQ5T7P3 118 aa2.25□□□□□ -2.05
RANBP3-216ENST00000589353 PRM1P04553 51 aa2.22□□□□□ -2.05
RANBP3-216ENST00000589353 KRTAP4-4Q9BYR3 166 aa2.15□□□□□ -2.07
RANBP3-216ENST00000589353 KRTAP21-2Q3LI59 83 aa1.94□□□□□ -2.1
RANBP3-216ENST00000589353 LCE1FQ5T754 118 aa1.94□□□□□ -2.1
RANBP3-216ENST00000589353 PHGR1C9JFL3 82 aa1.69□□□□□ -2.14
RANBP3-216ENST00000589353 MUC19Q7Z5P9 8384 aa1.4□□□□□ -2.19
RANBP3-216ENST00000589353 KRTAP21-1Q3LI58 79 aa1.35□□□□□ -2.19
RANBP3-216ENST00000589353 MUC16Q8WXI7 14507 aa1.14□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 11.4 ms