RNA–Protein interactions for RNA: ENST00000589104.5

KDM4B-208, Transcript of lysine demethylase 4B, humanhuman

TSL 2

Gene KDM4B, Length 3,470 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-208ENST00000589104 KRTAP19-6Q3LI70 58 aa4.57□□□□□ -1.68
KDM4B-208ENST00000589104 KRTAP9-6A0A140TA67 174 aa4.55□□□□□ -1.68
KDM4B-208ENST00000589104 KRTAP4-7Q9BYR0 210 aa4.54□□□□□ -1.68
KDM4B-208ENST00000589104 DSTQ03001 7570 aaKnown RBP4.51□□□□□ -1.69
KDM4B-208ENST00000589104 CRCT1Q9UGL9 99 aa4.46□□□□□ -1.7
KDM4B-208ENST00000589104 LCE2DQ5TA82 110 aaPredicted RBP4.45□□□□□ -1.7
KDM4B-208ENST00000589104 SYNE1Q8NF91 8797 aaKnown RBP4.44□□□□□ -1.7
KDM4B-208ENST00000589104 FCGBPQ9Y6R7 5405 aaPredicted RBP4.38□□□□□ -1.71
KDM4B-208ENST00000589104 KRTAP12-4P60329 112 aa4.32□□□□□ -1.72
KDM4B-208ENST00000589104 MT1MQ8N339 61 aa4.31□□□□□ -1.72
KDM4B-208ENST00000589104 KRTAP9-2Q9BYQ4 174 aa4.3□□□□□ -1.72
KDM4B-208ENST00000589104 KRTAP19-3Q7Z4W3 81 aa4.27□□□□□ -1.73
KDM4B-208ENST00000589104 LCE5AQ5TCM9 118 aa4.26□□□□□ -1.73
KDM4B-208ENST00000589104 LOC100996750A0A140TA64 210 aa4.25□□□□□ -1.73
KDM4B-208ENST00000589104 MT1GP13640 62 aa4.24□□□□□ -1.73
KDM4B-208ENST00000589104 KRTAP4-3Q9BYR4 195 aa4.23□□□□□ -1.73
KDM4B-208ENST00000589104 MUC12Q9UKN1 5478 aa4.23□□□□□ -1.73
KDM4B-208ENST00000589104 MT1AP04731 61 aa4.11□□□□□ -1.75
KDM4B-208ENST00000589104 KRTAP5-5Q701N2 237 aaPredicted RBP4.11□□□□□ -1.75
KDM4B-208ENST00000589104 SYNE2Q8WXH0 6885 aaKnown RBP4.11□□□□□ -1.75
KDM4B-208ENST00000589104 KRTAP4-9Q9BYQ8 210 aa4□□□□□ -1.77
KDM4B-208ENST00000589104 KRTAP5-9P26371 169 aa3.97□□□□□ -1.77
KDM4B-208ENST00000589104 KRTAP9-7A8MTY7 169 aa3.93□□□□□ -1.78
KDM4B-208ENST00000589104 LCE3BQ5TA77 95 aa3.93□□□□□ -1.78
KDM4B-208ENST00000589104 KRTAP6-1Q3LI64 71 aa3.91□□□□□ -1.78
KDM4B-208ENST00000589104 SPRR2FQ96RM1 72 aa3.91□□□□□ -1.78
KDM4B-208ENST00000589104 PRM1P04553 51 aa3.91□□□□□ -1.78
KDM4B-208ENST00000589104 MUC19Q7Z5P9 8384 aa3.9□□□□□ -1.79
KDM4B-208ENST00000589104 LCE1EQ5T753 118 aa3.89□□□□□ -1.79
KDM4B-208ENST00000589104 MACF1Q9UPN3 7388 aaKnown RBP3.88□□□□□ -1.79
KDM4B-208ENST00000589104 LCE1AQ5T7P2 110 aa3.81□□□□□ -1.8
KDM4B-208ENST00000589104 KRTAP6-3Q3LI67 103 aa3.78□□□□□ -1.8
KDM4B-208ENST00000589104 MDN1Q9NU22 5596 aa3.75□□□□□ -1.81
KDM4B-208ENST00000589104 LCE3DQ9BYE3 92 aa3.71□□□□□ -1.82
KDM4B-208ENST00000589104 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.7□□□□□ -1.82
KDM4B-208ENST00000589104 KRTAP9-4Q9BYQ2 154 aa3.7□□□□□ -1.82
KDM4B-208ENST00000589104 LCE3EQ5T5B0 92 aa3.68□□□□□ -1.82
KDM4B-208ENST00000589104 LCE1FQ5T754 118 aa3.68□□□□□ -1.82
KDM4B-208ENST00000589104 KRTAP2-2Q9BYT5 123 aa3.64□□□□□ -1.83
KDM4B-208ENST00000589104 LCE1DQ5T752 114 aa3.6□□□□□ -1.83
KDM4B-208ENST00000589104 KRTAP5-4Q6L8H1 288 aa3.56□□□□□ -1.84
KDM4B-208ENST00000589104 SPRR2EP22531 72 aa3.55□□□□□ -1.84
KDM4B-208ENST00000589104 SPRR2BP35325 72 aa3.55□□□□□ -1.84
KDM4B-208ENST00000589104 SPRR2AP35326 72 aa3.55□□□□□ -1.84
KDM4B-208ENST00000589104 KRTAP6-2Q3LI66 62 aa3.54□□□□□ -1.84
KDM4B-208ENST00000589104 GPR98Q8WXG9 6306 aa3.47□□□□□ -1.85
KDM4B-208ENST00000589104 NEBP20929 6669 aa3.42□□□□□ -1.86
KDM4B-208ENST00000589104 SPRR2DP22532 72 aa3.39□□□□□ -1.87
KDM4B-208ENST00000589104 KRTAP5-2Q701N4 177 aa3.39□□□□□ -1.87
KDM4B-208ENST00000589104 MT3P25713 68 aa3.36□□□□□ -1.87
KDM4B-208ENST00000589104 KRTAP20-1Q3LI63 56 aa3.35□□□□□ -1.87
KDM4B-208ENST00000589104 LCE4AQ5TA78 99 aa3.22□□□□□ -1.89
KDM4B-208ENST00000589104 KRTAP5-3Q6L8H2 238 aa3.14□□□□□ -1.91
KDM4B-208ENST00000589104 MT4P47944 62 aa3.12□□□□□ -1.91
KDM4B-208ENST00000589104 KRTAP20-2Q3LI61 65 aa3.11□□□□□ -1.91
KDM4B-208ENST00000589104 KRTAP4-6Q9BYQ5 205 aa3.06□□□□□ -1.92
KDM4B-208ENST00000589104 KRTAP5-1Q6L8H4 278 aa3.05□□□□□ -1.92
KDM4B-208ENST00000589104 KRTAP9-9Q9BYP9 154 aa3.03□□□□□ -1.92
KDM4B-208ENST00000589104 MUC5ACP98088 5654 aa2.98□□□□□ -1.93
KDM4B-208ENST00000589104 KRTAP4-11Q9BYQ6 195 aa2.97□□□□□ -1.93
KDM4B-208ENST00000589104 KRTAP5-10Q6L8G5 202 aa2.97□□□□□ -1.93
KDM4B-208ENST00000589104 HMCN1Q96RW7 5635 aa2.93□□□□□ -1.94
KDM4B-208ENST00000589104 MUC5BQ9HC84 5762 aaPredicted RBP2.91□□□□□ -1.94
KDM4B-208ENST00000589104 KRTAP5-7Q6L8G8 165 aa2.9□□□□□ -1.94
KDM4B-208ENST00000589104 LCE1BQ5T7P3 118 aa2.9□□□□□ -1.95
KDM4B-208ENST00000589104 AHNAK2Q8IVF2 5795 aa2.89□□□□□ -1.95
KDM4B-208ENST00000589104 AHNAKQ09666 5890 aaKnown RBP2.84□□□□□ -1.95
KDM4B-208ENST00000589104 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.84□□□□□ -1.95
KDM4B-208ENST00000589104 LCE1CQ5T751 118 aa2.82□□□□□ -1.96
KDM4B-208ENST00000589104 KRTAP4-2Q9BYR5 136 aa2.81□□□□□ -1.96
KDM4B-208ENST00000589104 KRTAP21-2Q3LI59 83 aa2.68□□□□□ -1.98
KDM4B-208ENST00000589104 KRTAP5-8O75690 187 aa2.64□□□□□ -1.99
KDM4B-208ENST00000589104 KRTAP21-1Q3LI58 79 aa2.51□□□□□ -2.01
KDM4B-208ENST00000589104 KRTAP4-4Q9BYR3 166 aa2.44□□□□□ -2.02
KDM4B-208ENST00000589104 KRTAP5-11Q6L8G4 156 aa2.43□□□□□ -2.02
KDM4B-208ENST00000589104 KRTAP4-12Q9BQ66 201 aa2.31□□□□□ -2.04
KDM4B-208ENST00000589104 PHGR1C9JFL3 82 aa2.09□□□□□ -2.08
KDM4B-208ENST00000589104 MUC16Q8WXI7 14507 aa1.53□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 12.4 ms