RNA–Protein interactions for RNA: ENST00000589091.1

DNMT1-217, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-217ENST00000589091 CYSTM1Q9H1C7 97 aa5.33□□□□□ -1.56
DNMT1-217ENST00000589091 DSTQ03001 7570 aaKnown RBP5.33□□□□□ -1.56
DNMT1-217ENST00000589091 SMIM26A0A096LP01 95 aa5.32□□□□□ -1.56
DNMT1-217ENST00000589091 KRTAP19-5Q3LI72 72 aa5.32□□□□□ -1.56
DNMT1-217ENST00000589091 PP632Q6XCG6 107 aa5.31□□□□□ -1.56
DNMT1-217ENST00000589091 A0A1B0GU69 56 aa5.3□□□□□ -1.56
DNMT1-217ENST00000589091 V9GYY9 64 aa5.28□□□□□ -1.56
DNMT1-217ENST00000589091 A8MU10 97 aa5.2□□□□□ -1.58
DNMT1-217ENST00000589091 TNP1P09430 55 aa5.2□□□□□ -1.58
DNMT1-217ENST00000589091 MT1MQ8N339 61 aa5.2□□□□□ -1.58
DNMT1-217ENST00000589091 MT1LQ93083 61 aa5.2□□□□□ -1.58
DNMT1-217ENST00000589091 GPR98Q8WXG9 6306 aa5.17□□□□□ -1.58
DNMT1-217ENST00000589091 ANAPC13Q9BS18 74 aa5.16□□□□□ -1.58
DNMT1-217ENST00000589091 LCE3AQ5TA76 89 aa5.15□□□□□ -1.59
DNMT1-217ENST00000589091 PRR15LQ9BU68 103 aa5.15□□□□□ -1.59
DNMT1-217ENST00000589091 C10orf95Q9H7T3 257 aa5.15□□□□□ -1.59
DNMT1-217ENST00000589091 ATP5EP56381 51 aaPredicted RBP5.1□□□□□ -1.59
DNMT1-217ENST00000589091 MT4P47944 62 aa5.09□□□□□ -1.59
DNMT1-217ENST00000589091 KRTAP5-4Q6L8H1 288 aa5.04□□□□□ -1.6
DNMT1-217ENST00000589091 KRTAP4-3Q9BYR4 195 aa5.03□□□□□ -1.6
DNMT1-217ENST00000589091 LINC01558Q9Y6Z2 57 aa5.03□□□□□ -1.6
DNMT1-217ENST00000589091 CCDC179H3BU77 68 aa5.02□□□□□ -1.61
DNMT1-217ENST00000589091 NDUFAF8A1L188 74 aa4.98□□□□□ -1.61
DNMT1-217ENST00000589091 KRTAP12-3P60328 96 aa4.97□□□□□ -1.61
DNMT1-217ENST00000589091 UQCR11O14957 56 aa4.96□□□□□ -1.62
DNMT1-217ENST00000589091 HMCN1Q96RW7 5635 aa4.95□□□□□ -1.62
DNMT1-217ENST00000589091 TMEM258P61165 79 aa4.89□□□□□ -1.63
DNMT1-217ENST00000589091 KRTAP5-10Q6L8G5 202 aa4.86□□□□□ -1.63
DNMT1-217ENST00000589091 KRTAP25-1Q3LHN0 102 aa4.85□□□□□ -1.63
DNMT1-217ENST00000589091 PSPHP1O15172 72 aa4.84□□□□□ -1.63
DNMT1-217ENST00000589091 AHNAK2Q8IVF2 5795 aa4.83□□□□□ -1.64
DNMT1-217ENST00000589091 MIR22HGQ0VDD5 57 aa4.8□□□□□ -1.64
DNMT1-217ENST00000589091 K7ERS5 55 aa4.79□□□□□ -1.64
DNMT1-217ENST00000589091 PRO0628Q9UI54 55 aa4.79□□□□□ -1.64
DNMT1-217ENST00000589091 KRTAP5-5Q701N2 237 aaPredicted RBP4.78□□□□□ -1.64
DNMT1-217ENST00000589091 SPRR5A0A1B0GTR4 108 aa4.75□□□□□ -1.65
DNMT1-217ENST00000589091 KRTAP20-2Q3LI61 65 aa4.75□□□□□ -1.65
DNMT1-217ENST00000589091 KRTAP12-4P60329 112 aa4.72□□□□□ -1.65
DNMT1-217ENST00000589091 KRTAP5-7Q6L8G8 165 aa4.7□□□□□ -1.66
DNMT1-217ENST00000589091 Q1T7F1 81 aa4.6□□□□□ -1.67
DNMT1-217ENST00000589091 LCE3CQ5T5A8 94 aa4.57□□□□□ -1.68
DNMT1-217ENST00000589091 SYNE1Q8NF91 8797 aaKnown RBP4.54□□□□□ -1.68
DNMT1-217ENST00000589091 MT3P25713 68 aa4.53□□□□□ -1.68
DNMT1-217ENST00000589091 A6NED7 52 aa4.49□□□□□ -1.69
DNMT1-217ENST00000589091 CDC42SE1Q9NRR8 79 aa4.49□□□□□ -1.69
DNMT1-217ENST00000589091 MT1AP04731 61 aa4.44□□□□□ -1.7
DNMT1-217ENST00000589091 PMAIP1Q13794 54 aa4.43□□□□□ -1.7
DNMT1-217ENST00000589091 LUZP6Q538Z0 58 aa4.42□□□□□ -1.7
DNMT1-217ENST00000589091 ROMO1P60602 79 aa4.4□□□□□ -1.71
DNMT1-217ENST00000589091 RPS28P62857 69 aaKnown RBP4.4□□□□□ -1.71
DNMT1-217ENST00000589091 KRTAP6-1Q3LI64 71 aa4.39□□□□□ -1.71
DNMT1-217ENST00000589091 KRTAP5-2Q701N4 177 aa4.39□□□□□ -1.71
DNMT1-217ENST00000589091 LCE1EQ5T753 118 aa4.27□□□□□ -1.73
DNMT1-217ENST00000589091 KRTAP9-6A8MVA2 160 aa4.26□□□□□ -1.73
DNMT1-217ENST00000589091 KRTAP5-11Q6L8G4 156 aa4.26□□□□□ -1.73
DNMT1-217ENST00000589091 KRTAP5-8O75690 187 aa4.22□□□□□ -1.73
DNMT1-217ENST00000589091 KRTAP6-2Q3LI66 62 aa4.21□□□□□ -1.74
DNMT1-217ENST00000589091 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.17□□□□□ -1.74
DNMT1-217ENST00000589091 OBSCNQ5VST9 7968 aa4.04□□□□□ -1.76
DNMT1-217ENST00000589091 LCE1FQ5T754 118 aa3.99□□□□□ -1.77
DNMT1-217ENST00000589091 KTN1-AS1Q86SY8 53 aa3.96□□□□□ -1.78
DNMT1-217ENST00000589091 MUC5ACP98088 5654 aa3.96□□□□□ -1.78
DNMT1-217ENST00000589091 AHNAKQ09666 5890 aaKnown RBP3.95□□□□□ -1.78
DNMT1-217ENST00000589091 MUC5BQ9HC84 5762 aaPredicted RBP3.95□□□□□ -1.78
DNMT1-217ENST00000589091 KRTAP5-1Q6L8H4 278 aa3.94□□□□□ -1.78
DNMT1-217ENST00000589091 BRK1Q8WUW1 75 aa3.68□□□□□ -1.82
DNMT1-217ENST00000589091 LCE1BQ5T7P3 118 aa3.53□□□□□ -1.84
DNMT1-217ENST00000589091 LCE1CQ5T751 118 aa3.49□□□□□ -1.85
DNMT1-217ENST00000589091 KRTAP4-4Q9BYR3 166 aa3.46□□□□□ -1.86
DNMT1-217ENST00000589091 LCE3EQ5T5B0 92 aa3.43□□□□□ -1.86
DNMT1-217ENST00000589091 LCE3DQ9BYE3 92 aa3.28□□□□□ -1.88
DNMT1-217ENST00000589091 INE1O15225 51 aa3.08□□□□□ -1.92
DNMT1-217ENST00000589091 KRTAP21-2Q3LI59 83 aa2.89□□□□□ -1.95
DNMT1-217ENST00000589091 PHGR1C9JFL3 82 aa2.84□□□□□ -1.95
DNMT1-217ENST00000589091 MUC19Q7Z5P9 8384 aa2.5□□□□□ -2.01
DNMT1-217ENST00000589091 PRM1P04553 51 aa2.22□□□□□ -2.05
DNMT1-217ENST00000589091 KRTAP21-1Q3LI58 79 aa2.17□□□□□ -2.06
DNMT1-217ENST00000589091 MUC16Q8WXI7 14507 aa1.77□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 7 ms