RNA–Protein interactions for RNA: ENST00000588815.5

CAPNS1-206, Transcript of calpain small subunit 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CAPNS1, Length 1,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-206ENST00000588815 KRTAP19-3Q7Z4W3 81 aa10.98□□□□□ -0.65
CAPNS1-206ENST00000588815 MUC12Q9UKN1 5478 aa10.92□□□□□ -0.66
CAPNS1-206ENST00000588815 MT1GP13640 62 aa10.9□□□□□ -0.66
CAPNS1-206ENST00000588815 LCE1AQ5T7P2 110 aa10.84□□□□□ -0.67
CAPNS1-206ENST00000588815 LCE5AQ5TCM9 118 aa10.81□□□□□ -0.68
CAPNS1-206ENST00000588815 LCE3CQ5T5A8 94 aa10.8□□□□□ -0.68
CAPNS1-206ENST00000588815 SPRR2EP22531 72 aa10.79□□□□□ -0.68
CAPNS1-206ENST00000588815 SPRR2BP35325 72 aa10.79□□□□□ -0.68
CAPNS1-206ENST00000588815 SPRR2AP35326 72 aa10.79□□□□□ -0.68
CAPNS1-206ENST00000588815 MT1MQ8N339 61 aa10.69□□□□□ -0.7
CAPNS1-206ENST00000588815 MDN1Q9NU22 5596 aa10.6□□□□□ -0.71
CAPNS1-206ENST00000588815 SPRR5A0A1B0GTR4 108 aa10.56□□□□□ -0.72
CAPNS1-206ENST00000588815 KRTAP4-7Q9BYR0 210 aa10.55□□□□□ -0.72
CAPNS1-206ENST00000588815 SPRR2DP22532 72 aa10.42□□□□□ -0.74
CAPNS1-206ENST00000588815 KRTAP4-3Q9BYR4 195 aa10.34□□□□□ -0.75
CAPNS1-206ENST00000588815 NEBP20929 6669 aa10.28□□□□□ -0.76
CAPNS1-206ENST00000588815 KRTAP9-6A8MVA2 160 aa10.11□□□□□ -0.79
CAPNS1-206ENST00000588815 LUZP6Q538Z0 58 aa10.11□□□□□ -0.79
CAPNS1-206ENST00000588815 LCE3BQ5TA77 95 aa10.03□□□□□ -0.8
CAPNS1-206ENST00000588815 DSTQ03001 7570 aaKnown RBP9.99□□□□□ -0.81
CAPNS1-206ENST00000588815 LOC100996750A0A140TA64 210 aa9.93□□□□□ -0.82
CAPNS1-206ENST00000588815 KRTAP2-3P0C7H8 128 aa9.89□□□□□ -0.83
CAPNS1-206ENST00000588815 KRTAP2-4Q9BYR9 128 aa9.89□□□□□ -0.83
CAPNS1-206ENST00000588815 KRTAP20-1Q3LI63 56 aa9.75□□□□□ -0.85
CAPNS1-206ENST00000588815 KRTAP5-5Q701N2 237 aaPredicted RBP9.69□□□□□ -0.86
CAPNS1-206ENST00000588815 KRTAP2-2Q9BYT5 123 aa9.66□□□□□ -0.86
CAPNS1-206ENST00000588815 KRTAP2-1Q9BYU5 128 aa9.66□□□□□ -0.86
CAPNS1-206ENST00000588815 H3BS24 57 aa9.59□□□□□ -0.87
CAPNS1-206ENST00000588815 NDUFAF8A1L188 74 aa9.54□□□□□ -0.88
CAPNS1-206ENST00000588815 MT1AP04731 61 aa9.45□□□□□ -0.9
CAPNS1-206ENST00000588815 KRTAP5-4Q6L8H1 288 aa9.4□□□□□ -0.9
CAPNS1-206ENST00000588815 LCE4AQ5TA78 99 aa9.34□□□□□ -0.91
CAPNS1-206ENST00000588815 KRTAP6-1Q3LI64 71 aa9.28□□□□□ -0.92
CAPNS1-206ENST00000588815 KRTAP12-4P60329 112 aa9.11□□□□□ -0.95
CAPNS1-206ENST00000588815 SYNE1Q8NF91 8797 aaKnown RBP9.06□□□□□ -0.96
CAPNS1-206ENST00000588815 KRTAP9-4Q9BYQ2 154 aa8.99□□□□□ -0.97
CAPNS1-206ENST00000588815 MT4P47944 62 aa8.97□□□□□ -0.97
CAPNS1-206ENST00000588815 KRTAP4-9Q9BYQ8 210 aa8.91□□□□□ -0.98
CAPNS1-206ENST00000588815 LCE1DQ5T752 114 aa8.9□□□□□ -0.98
CAPNS1-206ENST00000588815 KRTAP4-6Q9BYQ5 205 aa8.89□□□□□ -0.99
CAPNS1-206ENST00000588815 KRTAP20-2Q3LI61 65 aa8.77□□□□□ -1.01
CAPNS1-206ENST00000588815 HMCN1Q96RW7 5635 aa8.63□□□□□ -1.03
CAPNS1-206ENST00000588815 MT3P25713 68 aa8.6□□□□□ -1.03
CAPNS1-206ENST00000588815 KRTAP6-2Q3LI66 62 aa8.6□□□□□ -1.03
CAPNS1-206ENST00000588815 KRTAP5-2Q701N4 177 aa8.48□□□□□ -1.05
CAPNS1-206ENST00000588815 KRTAP5-3Q6L8H2 238 aa8.46□□□□□ -1.05
CAPNS1-206ENST00000588815 A0A0A0MQY5 61 aa8.43□□□□□ -1.06
CAPNS1-206ENST00000588815 LCE3DQ9BYE3 92 aa8.08□□□□□ -1.12
CAPNS1-206ENST00000588815 INE1O15225 51 aa8□□□□□ -1.13
CAPNS1-206ENST00000588815 LCE3EQ5T5B0 92 aa7.84□□□□□ -1.15
CAPNS1-206ENST00000588815 AHNAK2Q8IVF2 5795 aa7.77□□□□□ -1.17
CAPNS1-206ENST00000588815 OBSCNQ5VST9 7968 aa7.74□□□□□ -1.17
CAPNS1-206ENST00000588815 KRTAP4-11Q9BYQ6 195 aa7.67□□□□□ -1.18
CAPNS1-206ENST00000588815 LCE1EQ5T753 118 aa7.58□□□□□ -1.2
CAPNS1-206ENST00000588815 KRTAP5-10Q6L8G5 202 aa7.57□□□□□ -1.2
CAPNS1-206ENST00000588815 KRTAP5-8O75690 187 aa7.37□□□□□ -1.23
CAPNS1-206ENST00000588815 KRTAP5-1Q6L8H4 278 aa7.34□□□□□ -1.23
CAPNS1-206ENST00000588815 KRTAP5-7Q6L8G8 165 aa7.17□□□□□ -1.26
CAPNS1-206ENST00000588815 GPR98Q8WXG9 6306 aa7.13□□□□□ -1.27
CAPNS1-206ENST00000588815 LCE1CQ5T751 118 aa7.03□□□□□ -1.28
CAPNS1-206ENST00000588815 LCE1BQ5T7P3 118 aa7.03□□□□□ -1.28
CAPNS1-206ENST00000588815 KRTAP4-2Q9BYR5 136 aa6.98□□□□□ -1.29
CAPNS1-206ENST00000588815 MUC5ACP98088 5654 aa6.93□□□□□ -1.3
CAPNS1-206ENST00000588815 KRTAP9-9Q9BYP9 154 aa6.75□□□□□ -1.33
CAPNS1-206ENST00000588815 PRM1P04553 51 aa6.65□□□□□ -1.35
CAPNS1-206ENST00000588815 KRTAP5-6Q6L8G9 129 aaPredicted RBP6.58□□□□□ -1.36
CAPNS1-206ENST00000588815 MUC5BQ9HC84 5762 aaPredicted RBP6.26□□□□□ -1.41
CAPNS1-206ENST00000588815 KRTAP5-11Q6L8G4 156 aa6.23□□□□□ -1.41
CAPNS1-206ENST00000588815 KRTAP21-2Q3LI59 83 aa6.11□□□□□ -1.43
CAPNS1-206ENST00000588815 AHNAKQ09666 5890 aaKnown RBP5.89□□□□□ -1.47
CAPNS1-206ENST00000588815 KRTAP4-12Q9BQ66 201 aa5.77□□□□□ -1.49
CAPNS1-206ENST00000588815 LCE1FQ5T754 118 aa5.76□□□□□ -1.49
CAPNS1-206ENST00000588815 PHGR1C9JFL3 82 aa5.33□□□□□ -1.56
CAPNS1-206ENST00000588815 KRTAP4-4Q9BYR3 166 aa5.33□□□□□ -1.56
CAPNS1-206ENST00000588815 MUC19Q7Z5P9 8384 aa4.62□□□□□ -1.67
CAPNS1-206ENST00000588815 KRTAP21-1Q3LI58 79 aa4.05□□□□□ -1.76
CAPNS1-206ENST00000588815 MUC16Q8WXI7 14507 aa3.43□□□□□ -1.86
Retrieved 77 of 20,778 RNA–protein pairs in 10.9 ms