RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-208ENST00000588692 SPINT4Q6UDR6 99 aa5.49□□□□□ -1.53
DDX39A-208ENST00000588692 LCE3BQ5TA77 95 aa5.48□□□□□ -1.53
DDX39A-208ENST00000588692 KRTAP12-1P59990 96 aa5.45□□□□□ -1.54
DDX39A-208ENST00000588692 KRTAP19-7Q3SYF9 63 aa5.42□□□□□ -1.54
DDX39A-208ENST00000588692 K7ERS5 55 aa5.39□□□□□ -1.55
DDX39A-208ENST00000588692 MT1EP04732 61 aa5.39□□□□□ -1.55
DDX39A-208ENST00000588692 LCE5AQ5TCM9 118 aa5.36□□□□□ -1.55
DDX39A-208ENST00000588692 KRTAP19-3Q7Z4W3 81 aa5.35□□□□□ -1.55
DDX39A-208ENST00000588692 KRTAP25-1Q3LHN0 102 aa5.32□□□□□ -1.56
DDX39A-208ENST00000588692 KRTAP19-5Q3LI72 72 aa5.28□□□□□ -1.56
DDX39A-208ENST00000588692 DSTQ03001 7570 aaKnown RBP5.23□□□□□ -1.57
DDX39A-208ENST00000588692 MT1GP13640 62 aa5.23□□□□□ -1.57
DDX39A-208ENST00000588692 TNP1P09430 55 aa5.22□□□□□ -1.57
DDX39A-208ENST00000588692 PP632Q6XCG6 107 aa5.21□□□□□ -1.58
DDX39A-208ENST00000588692 LUZP6Q538Z0 58 aa5.2□□□□□ -1.58
DDX39A-208ENST00000588692 C10orf95Q9H7T3 257 aa5.2□□□□□ -1.58
DDX39A-208ENST00000588692 LCE3AQ5TA76 89 aa5.16□□□□□ -1.58
DDX39A-208ENST00000588692 MT1LQ93083 61 aa5.14□□□□□ -1.59
DDX39A-208ENST00000588692 MT1MQ8N339 61 aa5.13□□□□□ -1.59
DDX39A-208ENST00000588692 NDUFAF8A1L188 74 aa5.08□□□□□ -1.6
DDX39A-208ENST00000588692 KRTAP4-9Q9BYQ8 210 aa5.07□□□□□ -1.6
DDX39A-208ENST00000588692 KRTAP15-1Q3LI76 137 aa5.03□□□□□ -1.6
DDX39A-208ENST00000588692 LCE4AQ5TA78 99 aa5□□□□□ -1.61
DDX39A-208ENST00000588692 KRTAP12-3P60328 96 aa4.98□□□□□ -1.61
DDX39A-208ENST00000588692 LCE1DQ5T752 114 aa4.98□□□□□ -1.61
DDX39A-208ENST00000588692 GPR98Q8WXG9 6306 aa4.97□□□□□ -1.61
DDX39A-208ENST00000588692 KRTAP4-3Q9BYR4 195 aa4.96□□□□□ -1.62
DDX39A-208ENST00000588692 HMCN1Q96RW7 5635 aa4.9□□□□□ -1.62
DDX39A-208ENST00000588692 MT4P47944 62 aa4.9□□□□□ -1.62
DDX39A-208ENST00000588692 KRTAP5-4Q6L8H1 288 aa4.9□□□□□ -1.62
DDX39A-208ENST00000588692 KRTAP4-7Q9BYR0 210 aa4.85□□□□□ -1.63
DDX39A-208ENST00000588692 KRTAP23-1A1A580 65 aa4.76□□□□□ -1.65
DDX39A-208ENST00000588692 KRTAP19-4Q3LI73 84 aa4.76□□□□□ -1.65
DDX39A-208ENST00000588692 KRTAP4-6Q9BYQ5 205 aa4.76□□□□□ -1.65
DDX39A-208ENST00000588692 KRTAP5-5Q701N2 237 aaPredicted RBP4.71□□□□□ -1.66
DDX39A-208ENST00000588692 AHNAK2Q8IVF2 5795 aa4.71□□□□□ -1.66
DDX39A-208ENST00000588692 KRTAP5-10Q6L8G5 202 aa4.63□□□□□ -1.67
DDX39A-208ENST00000588692 SPRR5A0A1B0GTR4 108 aa4.62□□□□□ -1.67
DDX39A-208ENST00000588692 KRTAP20-2Q3LI61 65 aa4.62□□□□□ -1.67
DDX39A-208ENST00000588692 KRTAP12-4P60329 112 aa4.6□□□□□ -1.67
DDX39A-208ENST00000588692 LOC100996750A0A140TA64 210 aa4.59□□□□□ -1.67
DDX39A-208ENST00000588692 LCE3CQ5T5A8 94 aa4.59□□□□□ -1.67
DDX39A-208ENST00000588692 KRTAP5-3Q6L8H2 238 aa4.53□□□□□ -1.68
DDX39A-208ENST00000588692 SYNE1Q8NF91 8797 aaKnown RBP4.51□□□□□ -1.69
DDX39A-208ENST00000588692 KRTAP5-7Q6L8G8 165 aa4.46□□□□□ -1.7
DDX39A-208ENST00000588692 MT1AP04731 61 aa4.39□□□□□ -1.71
DDX39A-208ENST00000588692 INE1O15225 51 aa4.38□□□□□ -1.71
DDX39A-208ENST00000588692 KRTAP6-1Q3LI64 71 aa4.34□□□□□ -1.71
DDX39A-208ENST00000588692 KRTAP9-6A8MVA2 160 aa4.3□□□□□ -1.72
DDX39A-208ENST00000588692 KRTAP5-2Q701N4 177 aa4.3□□□□□ -1.72
DDX39A-208ENST00000588692 KRTAP9-4Q9BYQ2 154 aa4.23□□□□□ -1.73
DDX39A-208ENST00000588692 KRTAP4-11Q9BYQ6 195 aa4.22□□□□□ -1.73
DDX39A-208ENST00000588692 KRTAP6-2Q3LI66 62 aa4.15□□□□□ -1.75
DDX39A-208ENST00000588692 KRTAP5-8O75690 187 aa4.07□□□□□ -1.76
DDX39A-208ENST00000588692 MT3P25713 68 aa4.02□□□□□ -1.77
DDX39A-208ENST00000588692 OBSCNQ5VST9 7968 aa3.99□□□□□ -1.77
DDX39A-208ENST00000588692 MUC5ACP98088 5654 aa3.89□□□□□ -1.79
DDX39A-208ENST00000588692 MUC5BQ9HC84 5762 aaPredicted RBP3.88□□□□□ -1.79
DDX39A-208ENST00000588692 KRTAP9-9Q9BYP9 154 aa3.87□□□□□ -1.79
DDX39A-208ENST00000588692 AHNAKQ09666 5890 aaKnown RBP3.87□□□□□ -1.79
DDX39A-208ENST00000588692 KRTAP5-1Q6L8H4 278 aa3.84□□□□□ -1.8
DDX39A-208ENST00000588692 LCE1EQ5T753 118 aa3.71□□□□□ -1.82
DDX39A-208ENST00000588692 KRTAP4-2Q9BYR5 136 aa3.47□□□□□ -1.85
DDX39A-208ENST00000588692 LCE1BQ5T7P3 118 aa3.45□□□□□ -1.86
DDX39A-208ENST00000588692 LCE1CQ5T751 118 aa3.44□□□□□ -1.86
DDX39A-208ENST00000588692 LCE3DQ9BYE3 92 aa3.31□□□□□ -1.88
DDX39A-208ENST00000588692 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.14□□□□□ -1.91
DDX39A-208ENST00000588692 LCE3EQ5T5B0 92 aa3.11□□□□□ -1.91
DDX39A-208ENST00000588692 KRTAP5-11Q6L8G4 156 aa3.11□□□□□ -1.91
DDX39A-208ENST00000588692 KRTAP4-12Q9BQ66 201 aa3.11□□□□□ -1.91
DDX39A-208ENST00000588692 LCE1FQ5T754 118 aa3.04□□□□□ -1.92
DDX39A-208ENST00000588692 KRTAP21-2Q3LI59 83 aa2.86□□□□□ -1.95
DDX39A-208ENST00000588692 PRM1P04553 51 aa2.71□□□□□ -1.98
DDX39A-208ENST00000588692 PHGR1C9JFL3 82 aa2.7□□□□□ -1.98
DDX39A-208ENST00000588692 KRTAP4-4Q9BYR3 166 aa2.58□□□□□ -2
DDX39A-208ENST00000588692 MUC19Q7Z5P9 8384 aa2.47□□□□□ -2.01
DDX39A-208ENST00000588692 KRTAP21-1Q3LI58 79 aa2.07□□□□□ -2.08
DDX39A-208ENST00000588692 MUC16Q8WXI7 14507 aa1.73□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 12.3 ms