RNA–Protein interactions for RNA: ENST00000586985.1

SMARCA4-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-212ENST00000586985 KRTAP2-2Q9BYT5 123 aa5.35□□□□□ -1.55
SMARCA4-212ENST00000586985 KRTAP2-1Q9BYU5 128 aa5.35□□□□□ -1.55
SMARCA4-212ENST00000586985 LCE3AQ5TA76 89 aa5.32□□□□□ -1.56
SMARCA4-212ENST00000586985 KRTAP19-3Q7Z4W3 81 aa5.31□□□□□ -1.56
SMARCA4-212ENST00000586985 LCE3BQ5TA77 95 aa5.3□□□□□ -1.56
SMARCA4-212ENST00000586985 LCE5AQ5TCM9 118 aa5.28□□□□□ -1.56
SMARCA4-212ENST00000586985 MT1GP13640 62 aa5.23□□□□□ -1.57
SMARCA4-212ENST00000586985 PMAIP1Q13794 54 aa5.22□□□□□ -1.57
SMARCA4-212ENST00000586985 PP632Q6XCG6 107 aa5.2□□□□□ -1.58
SMARCA4-212ENST00000586985 PRO0628Q9UI54 55 aa5.2□□□□□ -1.58
SMARCA4-212ENST00000586985 KRTAP23-1A1A580 65 aa5.18□□□□□ -1.58
SMARCA4-212ENST00000586985 MT1LQ93083 61 aa5.17□□□□□ -1.58
SMARCA4-212ENST00000586985 KRTAP12-3P60328 96 aa5.14□□□□□ -1.59
SMARCA4-212ENST00000586985 MT1MQ8N339 61 aa5.1□□□□□ -1.59
SMARCA4-212ENST00000586985 KRTAP4-3Q9BYR4 195 aa4.97□□□□□ -1.61
SMARCA4-212ENST00000586985 DSTQ03001 7570 aaKnown RBP4.92□□□□□ -1.62
SMARCA4-212ENST00000586985 KRTAP4-7Q9BYR0 210 aa4.92□□□□□ -1.62
SMARCA4-212ENST00000586985 KRTAP19-4Q3LI73 84 aa4.9□□□□□ -1.63
SMARCA4-212ENST00000586985 KRTAP4-9Q9BYQ8 210 aa4.89□□□□□ -1.63
SMARCA4-212ENST00000586985 KRTAP15-1Q3LI76 137 aa4.88□□□□□ -1.63
SMARCA4-212ENST00000586985 KTN1-AS1Q86SY8 53 aa4.88□□□□□ -1.63
SMARCA4-212ENST00000586985 LCE4AQ5TA78 99 aa4.85□□□□□ -1.63
SMARCA4-212ENST00000586985 PRAC1Q96KF2 57 aa4.85□□□□□ -1.63
SMARCA4-212ENST00000586985 MT4P47944 62 aa4.77□□□□□ -1.65
SMARCA4-212ENST00000586985 LCE1DQ5T752 114 aa4.77□□□□□ -1.65
SMARCA4-212ENST00000586985 LCE3CQ5T5A8 94 aa4.75□□□□□ -1.65
SMARCA4-212ENST00000586985 KRTAP5-4Q6L8H1 288 aa4.74□□□□□ -1.65
SMARCA4-212ENST00000586985 SVIPQ8NHG7 77 aa4.68□□□□□ -1.66
SMARCA4-212ENST00000586985 LOC100996750A0A140TA64 210 aa4.65□□□□□ -1.67
SMARCA4-212ENST00000586985 KRTAP4-6Q9BYQ5 205 aa4.64□□□□□ -1.67
SMARCA4-212ENST00000586985 KRTAP5-5Q701N2 237 aaPredicted RBP4.63□□□□□ -1.67
SMARCA4-212ENST00000586985 KRTAP12-4P60329 112 aa4.55□□□□□ -1.68
SMARCA4-212ENST00000586985 HMCN1Q96RW7 5635 aa4.51□□□□□ -1.69
SMARCA4-212ENST00000586985 SPRR5A0A1B0GTR4 108 aa4.5□□□□□ -1.69
SMARCA4-212ENST00000586985 KRTAP20-2Q3LI61 65 aa4.48□□□□□ -1.69
SMARCA4-212ENST00000586985 KRTAP9-6A8MVA2 160 aa4.42□□□□□ -1.7
SMARCA4-212ENST00000586985 MT1AP04731 61 aa4.41□□□□□ -1.7
SMARCA4-212ENST00000586985 GPR98Q8WXG9 6306 aa4.38□□□□□ -1.71
SMARCA4-212ENST00000586985 SYNE1Q8NF91 8797 aaKnown RBP4.37□□□□□ -1.71
SMARCA4-212ENST00000586985 KRTAP6-1Q3LI64 71 aa4.36□□□□□ -1.71
SMARCA4-212ENST00000586985 KRTAP5-3Q6L8H2 238 aa4.33□□□□□ -1.72
SMARCA4-212ENST00000586985 KRTAP5-10Q6L8G5 202 aa4.32□□□□□ -1.72
SMARCA4-212ENST00000586985 KRTAP9-4Q9BYQ2 154 aa4.27□□□□□ -1.73
SMARCA4-212ENST00000586985 AHNAK2Q8IVF2 5795 aa4.25□□□□□ -1.73
SMARCA4-212ENST00000586985 KRTAP5-2Q701N4 177 aa4.18□□□□□ -1.74
SMARCA4-212ENST00000586985 LUZP6Q538Z0 58 aa4.16□□□□□ -1.74
SMARCA4-212ENST00000586985 KRTAP6-2Q3LI66 62 aa4.15□□□□□ -1.75
SMARCA4-212ENST00000586985 KRTAP5-7Q6L8G8 165 aa4.14□□□□□ -1.75
SMARCA4-212ENST00000586985 MT3P25713 68 aa4.06□□□□□ -1.76
SMARCA4-212ENST00000586985 KRTAP4-11Q9BYQ6 195 aa4.06□□□□□ -1.76
SMARCA4-212ENST00000586985 KRTAP5-8O75690 187 aa3.91□□□□□ -1.78
SMARCA4-212ENST00000586985 OBSCNQ5VST9 7968 aa3.72□□□□□ -1.81
SMARCA4-212ENST00000586985 NDUFAF8A1L188 74 aa3.72□□□□□ -1.81
SMARCA4-212ENST00000586985 KRTAP5-1Q6L8H4 278 aa3.72□□□□□ -1.81
SMARCA4-212ENST00000586985 KRTAP9-9Q9BYP9 154 aa3.72□□□□□ -1.81
SMARCA4-212ENST00000586985 LCE1EQ5T753 118 aa3.66□□□□□ -1.82
SMARCA4-212ENST00000586985 LCE3DQ9BYE3 92 aa3.5□□□□□ -1.85
SMARCA4-212ENST00000586985 MUC5ACP98088 5654 aa3.48□□□□□ -1.85
SMARCA4-212ENST00000586985 LCE1BQ5T7P3 118 aa3.46□□□□□ -1.86
SMARCA4-212ENST00000586985 MUC5BQ9HC84 5762 aaPredicted RBP3.45□□□□□ -1.86
SMARCA4-212ENST00000586985 AHNAKQ09666 5890 aaKnown RBP3.44□□□□□ -1.86
SMARCA4-212ENST00000586985 KRTAP4-2Q9BYR5 136 aa3.41□□□□□ -1.86
SMARCA4-212ENST00000586985 LCE1CQ5T751 118 aa3.39□□□□□ -1.87
SMARCA4-212ENST00000586985 LCE3EQ5T5B0 92 aa3.36□□□□□ -1.87
SMARCA4-212ENST00000586985 A0A0A0MQY5 61 aa3.26□□□□□ -1.89
SMARCA4-212ENST00000586985 H3BS24 57 aa3.2□□□□□ -1.9
SMARCA4-212ENST00000586985 INE1O15225 51 aa3.11□□□□□ -1.91
SMARCA4-212ENST00000586985 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.08□□□□□ -1.92
SMARCA4-212ENST00000586985 KRTAP4-12Q9BQ66 201 aa3.06□□□□□ -1.92
SMARCA4-212ENST00000586985 KRTAP5-11Q6L8G4 156 aa3.04□□□□□ -1.92
SMARCA4-212ENST00000586985 LCE1FQ5T754 118 aa2.95□□□□□ -1.94
SMARCA4-212ENST00000586985 KRTAP21-2Q3LI59 83 aa2.87□□□□□ -1.95
SMARCA4-212ENST00000586985 PRM1P04553 51 aa2.76□□□□□ -1.97
SMARCA4-212ENST00000586985 PHGR1C9JFL3 82 aa2.62□□□□□ -1.99
SMARCA4-212ENST00000586985 KRTAP4-4Q9BYR3 166 aa2.62□□□□□ -1.99
SMARCA4-212ENST00000586985 MUC19Q7Z5P9 8384 aa2.31□□□□□ -2.04
SMARCA4-212ENST00000586985 KRTAP21-1Q3LI58 79 aa1.93□□□□□ -2.1
SMARCA4-212ENST00000586985 MUC16Q8WXI7 14507 aa1.66□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 12.9 ms