RNA–Protein interactions for RNA: ENST00000585931.5

LDLRAD4-205, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD4, Length 2,118 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-205ENST00000585931 LCE3CQ5T5A8 94 aa5.36□□□□□ -1.55
LDLRAD4-205ENST00000585931 SYNE2Q8WXH0 6885 aaKnown RBP5.36□□□□□ -1.55
LDLRAD4-205ENST00000585931 MT1LQ93083 61 aa5.35□□□□□ -1.55
LDLRAD4-205ENST00000585931 KRTAP4-7Q9BYR0 210 aa5.29□□□□□ -1.56
LDLRAD4-205ENST00000585931 KRTAP9-7A8MTY7 169 aa5.24□□□□□ -1.57
LDLRAD4-205ENST00000585931 SPRR2FQ96RM1 72 aa5.23□□□□□ -1.57
LDLRAD4-205ENST00000585931 KRTAP19-4Q3LI73 84 aa5.23□□□□□ -1.57
LDLRAD4-205ENST00000585931 KRTAP19-3Q7Z4W3 81 aa5.18□□□□□ -1.58
LDLRAD4-205ENST00000585931 KRTAP9-6A8MVA2 160 aa5.15□□□□□ -1.59
LDLRAD4-205ENST00000585931 MDN1Q9NU22 5596 aa5.15□□□□□ -1.59
LDLRAD4-205ENST00000585931 MT1GP13640 62 aa5.14□□□□□ -1.59
LDLRAD4-205ENST00000585931 KRTAP6-3Q3LI67 103 aa5.13□□□□□ -1.59
LDLRAD4-205ENST00000585931 MT1MQ8N339 61 aa5.11□□□□□ -1.59
LDLRAD4-205ENST00000585931 KRTAP5-9P26371 169 aa5.1□□□□□ -1.59
LDLRAD4-205ENST00000585931 KRTAP4-3Q9BYR4 195 aa5.09□□□□□ -1.59
LDLRAD4-205ENST00000585931 LCE5AQ5TCM9 118 aa5.09□□□□□ -1.59
LDLRAD4-205ENST00000585931 DSTQ03001 7570 aaKnown RBP5.04□□□□□ -1.6
LDLRAD4-205ENST00000585931 NEBP20929 6669 aa4.99□□□□□ -1.61
LDLRAD4-205ENST00000585931 LCE1AQ5T7P2 110 aa4.98□□□□□ -1.61
LDLRAD4-205ENST00000585931 KRTAP2-3P0C7H8 128 aa4.96□□□□□ -1.62
LDLRAD4-205ENST00000585931 KRTAP2-4Q9BYR9 128 aa4.96□□□□□ -1.62
LDLRAD4-205ENST00000585931 KRTAP2-1Q9BYU5 128 aa4.96□□□□□ -1.62
LDLRAD4-205ENST00000585931 LOC100996750A0A140TA64 210 aa4.96□□□□□ -1.62
LDLRAD4-205ENST00000585931 SPRR2EP22531 72 aa4.9□□□□□ -1.62
LDLRAD4-205ENST00000585931 SPRR2BP35325 72 aa4.9□□□□□ -1.62
LDLRAD4-205ENST00000585931 SPRR2AP35326 72 aa4.9□□□□□ -1.62
LDLRAD4-205ENST00000585931 SPRR2DP22532 72 aa4.72□□□□□ -1.65
LDLRAD4-205ENST00000585931 KRTAP4-6Q9BYQ5 205 aa4.71□□□□□ -1.66
LDLRAD4-205ENST00000585931 KRTAP2-2Q9BYT5 123 aa4.64□□□□□ -1.67
LDLRAD4-205ENST00000585931 KRTAP20-1Q3LI63 56 aa4.6□□□□□ -1.67
LDLRAD4-205ENST00000585931 KRTAP5-5Q701N2 237 aaPredicted RBP4.6□□□□□ -1.67
LDLRAD4-205ENST00000585931 KRTAP6-1Q3LI64 71 aa4.53□□□□□ -1.68
LDLRAD4-205ENST00000585931 LCE3BQ5TA77 95 aa4.52□□□□□ -1.69
LDLRAD4-205ENST00000585931 MT1AP04731 61 aa4.51□□□□□ -1.69
LDLRAD4-205ENST00000585931 KRTAP12-4P60329 112 aa4.5□□□□□ -1.69
LDLRAD4-205ENST00000585931 SYNE1Q8NF91 8797 aaKnown RBP4.49□□□□□ -1.69
LDLRAD4-205ENST00000585931 KRTAP4-12Q9BQ66 201 aa4.36□□□□□ -1.71
LDLRAD4-205ENST00000585931 KRTAP9-4Q9BYQ2 154 aa4.3□□□□□ -1.72
LDLRAD4-205ENST00000585931 KRTAP5-4Q6L8H1 288 aa4.29□□□□□ -1.72
LDLRAD4-205ENST00000585931 KRTAP4-9Q9BYQ8 210 aa4.26□□□□□ -1.73
LDLRAD4-205ENST00000585931 KRTAP6-2Q3LI66 62 aa4.15□□□□□ -1.75
LDLRAD4-205ENST00000585931 MT4P47944 62 aa4.13□□□□□ -1.75
LDLRAD4-205ENST00000585931 LCE4AQ5TA78 99 aa4.13□□□□□ -1.75
LDLRAD4-205ENST00000585931 KRTAP9-9Q9BYP9 154 aa4.13□□□□□ -1.75
LDLRAD4-205ENST00000585931 HMCN1Q96RW7 5635 aa4.08□□□□□ -1.76
LDLRAD4-205ENST00000585931 PRM1P04553 51 aa4.08□□□□□ -1.76
LDLRAD4-205ENST00000585931 MT3P25713 68 aa4.08□□□□□ -1.76
LDLRAD4-205ENST00000585931 LCE1DQ5T752 114 aa4.05□□□□□ -1.76
LDLRAD4-205ENST00000585931 LCE3DQ9BYE3 92 aa4.05□□□□□ -1.76
LDLRAD4-205ENST00000585931 LCE1EQ5T753 118 aa4.03□□□□□ -1.76
LDLRAD4-205ENST00000585931 OBSCNQ5VST9 7968 aa4.02□□□□□ -1.77
LDLRAD4-205ENST00000585931 KRTAP20-2Q3LI61 65 aa4.02□□□□□ -1.77
LDLRAD4-205ENST00000585931 LCE3EQ5T5B0 92 aa3.98□□□□□ -1.77
LDLRAD4-205ENST00000585931 KRTAP5-2Q701N4 177 aa3.92□□□□□ -1.78
LDLRAD4-205ENST00000585931 KRTAP5-3Q6L8H2 238 aa3.87□□□□□ -1.79
LDLRAD4-205ENST00000585931 AHNAK2Q8IVF2 5795 aa3.82□□□□□ -1.8
LDLRAD4-205ENST00000585931 GPR98Q8WXG9 6306 aa3.78□□□□□ -1.8
LDLRAD4-205ENST00000585931 KRTAP4-11Q9BYQ6 195 aa3.73□□□□□ -1.81
LDLRAD4-205ENST00000585931 KRTAP4-2Q9BYR5 136 aa3.68□□□□□ -1.82
LDLRAD4-205ENST00000585931 LCE1FQ5T754 118 aa3.67□□□□□ -1.82
LDLRAD4-205ENST00000585931 KRTAP5-10Q6L8G5 202 aa3.62□□□□□ -1.83
LDLRAD4-205ENST00000585931 KRTAP5-7Q6L8G8 165 aa3.42□□□□□ -1.86
LDLRAD4-205ENST00000585931 MUC5ACP98088 5654 aa3.41□□□□□ -1.86
LDLRAD4-205ENST00000585931 KRTAP5-1Q6L8H4 278 aa3.4□□□□□ -1.87
LDLRAD4-205ENST00000585931 KRTAP5-8O75690 187 aa3.34□□□□□ -1.87
LDLRAD4-205ENST00000585931 LCE1BQ5T7P3 118 aa3.34□□□□□ -1.87
LDLRAD4-205ENST00000585931 LCE1CQ5T751 118 aa3.28□□□□□ -1.89
LDLRAD4-205ENST00000585931 MUC5BQ9HC84 5762 aaPredicted RBP3.12□□□□□ -1.91
LDLRAD4-205ENST00000585931 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.07□□□□□ -1.92
LDLRAD4-205ENST00000585931 AHNAKQ09666 5890 aaKnown RBP3.05□□□□□ -1.92
LDLRAD4-205ENST00000585931 KRTAP21-2Q3LI59 83 aa2.96□□□□□ -1.94
LDLRAD4-205ENST00000585931 KRTAP5-11Q6L8G4 156 aa2.86□□□□□ -1.95
LDLRAD4-205ENST00000585931 KRTAP21-1Q3LI58 79 aa2.78□□□□□ -1.96
LDLRAD4-205ENST00000585931 KRTAP4-4Q9BYR3 166 aa2.67□□□□□ -1.98
LDLRAD4-205ENST00000585931 PHGR1C9JFL3 82 aa2.47□□□□□ -2.01
LDLRAD4-205ENST00000585931 MUC19Q7Z5P9 8384 aa2.45□□□□□ -2.02
LDLRAD4-205ENST00000585931 MUC16Q8WXI7 14507 aa1.59□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 164.8 ms